DY256911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_MYCSK (Regulator of ribonuclease activity A OS=Mycobacterium sp. (strain KMS) GN=rraA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.520e-22 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILI 348 T++ FQ N L++ L E G+ VLV+DG GSL A++G +NGW+G+++NG +RD + DIG++AL + P K+ K G GE+ VP+ GG + G+ Y+D DGI++ Sbjct: 41 TVRCFQDNALLKSVLSEPGDGGVLVIDGDGSLHTALVGDVIAALGRDNGWSGLIINGAVRDASTLRTLDIGIKALGTNPRKSTKTGAGERDVPVDFGGVTFTPGDVAYSDDDGIVV 156
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAES2 (Regulator of ribonuclease activity A OS=Haemophilus somnus (strain 2336) GN=rraA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.520e-22 Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI E LEE G RVL++DGGG++R A++ N A +NGW GI+V G IR + ++ +IG++ALA P+ ++++ IGE VP+ GG +++YAD GI++S+ L + Sbjct: 38 TIKCFENNGLISEILEENGEGRVLLIDGGGAVRRALIDANLAQLAADNGWEGIIVYGAIRQLQQLENINIGIQALAPIPVGSDEQSIGETDVPVNFGGVTFFPDDYIYADLTGIILSQEPLDL 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAES1 (Regulator of ribonuclease activity A OS=Haemophilus somnus (strain 129Pt) GN=rraA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.985e-22 Identity = 51/123 (41.46%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI E LEE G RVL++DGGG++R A++ N A +NGW GI+V G IR + ++ +IG++ALA P+ ++++ IGE VP+ GG +++YAD GI++S+ L + Sbjct: 38 TIKCFENNGLISEILEENGEGRVLLIDGGGAVRRALIDANLAQLAADNGWEGIIVYGAIRQLQQLENINIGIQALAPIPVGSDEQSIGETDVPVNFGGVTFFPDDYVYADLTGIILSQEPLDL 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_YERE8 (Regulator of ribonuclease activity A OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rraA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 4.422e-22 Identity = 55/123 (44.72%), Postives = 76/123 (61.79%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L+ + LEE G RVLVVDGGGS+R A++ A N W GIVV G +R VDE+ DIG++A+A+ P+ A +GIGE + + GG G+ LYAD GI++S L + Sbjct: 38 TVKCFEDNGLLFDLLEENGLGRVLVVDGGGSVRRALINAELADLALKNEWEGIVVYGAVRQVDELAELDIGIQAMAAIPVGAADEGIGESDIRVNFGGVTFFSGDHLYADNTGIILSEEPLDI 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_SERP5 (Regulator of ribonuclease activity A OS=Serratia proteamaculans (strain 568) GN=rraA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 5.775e-22 Identity = 53/123 (43.09%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N L+ E LEE G RVLV+DGGGS+R A++ A N W GIVV G +R VD++ DIG++A+A+ P+ A + IGE + + GG G+ LYAD GI++S L + Sbjct: 38 TVKCFEDNGLLFELLEENGRGRVLVIDGGGSVRRALINAELARLATQNEWEGIVVYGAVRQVDDLEEMDIGIQAMAAIPVGAASESIGESDIRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_XANAC (Regulator of ribonuclease activity A OS=Xanthomonas axonopodis pv. citri GN=rraA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.543e-22 Identity = 49/123 (39.84%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T++ F+ N +RE G+ RVLVVDG GSL+ A+LG A NGWAG++++GC+RDV+ + +GV ALA+ P + ++ +G+ VP+ G G WLYAD +G+L++ L++ Sbjct: 37 TVRCFEDNSRVRELAATPGDGRVLVVDGQGSLKHALLGDQIAANAVANGWAGVLIHGCVRDVEILATLPLGVLALAACPRRTERRDLGDVDVPVNFAGVPFVPGHWLYADANGVLVAPQPLAL 159
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_PASMU (Regulator of ribonuclease activity A OS=Pasteurella multocida GN=rraA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.543e-22 Identity = 51/123 (41.46%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI + LEE G RVL++DGGG++R A++ A +NGW GI+V G +R + ++ DIG+ ALA P+ A+K+ IGE VP+ GG +++YAD GI++S+ L + Sbjct: 38 TVKCFENNGLITDILEENGEGRVLLIDGGGAVRRALVDAELAQLAVDNGWEGIIVYGAVRQIQQLEEMDIGIHALAPIPVGADKQNIGEIDVPVNFGGVTFFPEDYVYADLTGIILSQEPLEL 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAEIN (Regulator of ribonuclease activity A OS=Haemophilus influenzae GN=rraA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.543e-22 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI E LEE G RVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P+ A++ GE +P+ GG +++YAD GI++S+ L + Sbjct: 38 TVKCFESNGLIAEVLEENGEGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIPVSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAEIG (Regulator of ribonuclease activity A OS=Haemophilus influenzae (strain PittGG) GN=rraA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.543e-22 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI E LEE G RVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P+ A++ GE +P+ GG +++YAD GI++S+ L + Sbjct: 38 TVKCFESNGLIAEVLEENGEGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIPVSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160
BLAST of DY256911 vs. ExPASy Swiss-Prot
Match: RRAA_HAEIE (Regulator of ribonuclease activity A OS=Haemophilus influenzae (strain PittEE) GN=rraA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 7.543e-22 Identity = 49/123 (39.84%), Postives = 75/123 (60.98%), Query Frame = 1 Query: 1 TLKVFQFNVLIREFLEEKGNLRVLVVDGGGSLRCAILGGNPVVQAHNNGWAGIVVNGCIRDVDEINGCDIGVRALASRPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 369 T+K F+ N LI E LEE G RVLV+DGGG++R ++ A +NGW GI+V G +R + ++ DIG+ ALA P+ A++ GE +P+ GG +++YAD GI++S+ L + Sbjct: 38 TVKCFESNGLIAEVLEENGEGRVLVIDGGGAVRRGLIDAELAQLAVDNGWEGIIVYGAVRQIQQLENLDIGIHALAPIPVSADESSAGESDIPVNFGGVTFFPEDYIYADLTGIILSQEPLDL 160 The following BLAST results are available for this feature:
BLAST of DY256911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256911 ID=DY256911; Name=DY256911; organism=Citrus clementina; type=EST; length=1120bpback to top |