DY256923

Overview
NameDY256923
Unique NameDY256923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1174
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY256923_ssr132 microsatellite DY256923_ssr132:132..141. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14563 contig Ccv1_Contig14563:564..1737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK27_ORYSJ (Potassium transporter 27 OS=Oryza sativa subsp. japonica GN=HAK27 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 2.505e-31
Identity = 64/158 (40.51%), Postives = 99/158 (62.66%), Query Frame = 2
Query:   44 EALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYDMEFEKDLVCTIAE 517
            E++Y SA L +F+ G +VP+A++   +IVM VWHY  +K+ +F+L++ V  + +        I RV G+ L +T+LV GIP +F H + K+P+ H VL+F+ IK +PIP V   ERF+  H+    Y++++C+ RYGYRD     ME  KD V  + E
Sbjct:  499 ESIYLSAVLYQFVHGEYVPVAMSVFLMIVMTVWHYVHVKRYEFELEHTVPRDKVKELLERRDIQRVPGVGLFYTDLVQGIPPVFPHLIEKIPSIHSVLIFVSIKHLPIPSVDRSERFIFRHVDKEEYKVFQCVARYGYRD----PMEEAKDFVDALTE 652          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK15_ORYSJ (Probable potassium transporter 15 OS=Oryza sativa subsp. japonica GN=HAK15 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 5.581e-31
Identity = 65/183 (35.52%), Postives = 112/183 (61.20%), Query Frame = 2
Query:   38 TIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYDME-FEKDLVCTIAEFIRSGSVGINGANEDPYKDDDK 583
            ++E ++FS+SL    +G W  I  A   L+VM +W+YG+  K   +++  +S + +    P LG +R  G+ L+++E+V G+P IF HF+  LPA H ++VF+CI++VP+P V   ERFL   +  R Y ++RCI RYGY+D ++     FE+ L+  + +FI+  +V ++  + D    D++
Sbjct:  560 SLELVFFSSSLSSVGDGGWALIIFASGILMVMFIWNYGSKLKYDSEVKKKLSKDLMRKLGPNLGTIRAPGLGLVYSEIVKGVPAIFGHFLIALPAIHSIIVFVCIRNVPVPVVPQTERFLFQRVCTRGYHMFRCIARYGYKDKNQESQSTFERLLIEGLEKFIQREAVELSLQSGDDIDSDEE 742          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK1_ORYSJ (Potassium transporter 1 OS=Oryza sativa subsp. japonica GN=HAK1 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.770e-30
Identity = 73/203 (35.96%), Postives = 109/203 (53.69%), Query Frame = 2
Query:   35 GTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*-SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYDMEFEKDLVCTIAEFIRSGSV-GINGANEDPYKDDDKMTVVGTCSSHT*GIHMSE 637
            G  E +Y S+ L KF++G ++P   A + + +M  WHY  +++  ++L ++V    L +      G+ RV G+ L++TELV GIP +F   V K+P+ H V VF+ IK +PIPHV   ERFL   +GPR  R++RC+ RYGY D  +   EF   LV  +  FI+  S    +    D   DDD         S +  +H  E
Sbjct:  498 GFTEVVYLSSILSKFVDGGYLPFCFAMVLMTMMATWHYVHVRRYWYELDHIVPTAELASLLEENGGVRRVPGVGLLYTELVQGIPPLFPRLVRKIPSVHAVFVFISIKHLPIPHVAAAERFLFRQVGPRARRVFRCVARYGYTDALEEPREFAAFLVDGLKMFIQEESAFAPHQEMIDAAADDDDEAAARPRRSTSSAVHSEE 700          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: POT5_ARATH (Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.069e-30
Identity = 80/285 (28.07%), Postives = 145/285 (50.88%), Query Frame = 2
Query:   35 GTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYDMEFEKDLVCTIAEFIRSGSVGINGANE----DPYKDDDKMTVVGTCSSHT*GIHMSEDDVIVNIHSPGTSELREIQSPTQIKPMKIVRFVVPDSPQIAREAMKDLQELME-ARAAGIPLLLGHSYLKTKQRVKCTKK 874
            G+IE LY S+ + KF  G ++P+ +  + + +M +W Y  + K +++L+  +S    +  + +  + RV GI L +TELV+GI  +FSH+++ L + H V V + IK++P+  VT  ERF   ++GP+   ++RC+VRYGY++  +   EFE+  V  + EFI        G  E    D  ++ +  T V   S++              + S G        S  +I+  ++V+           ++++D  EL+E AR  G+  L+G + +  ++     KK
Sbjct:  488 GSIEMLYLSSVMYKFTSGGYLPLTITVVLMAMMAIWQYVHVLKYRYELREKISRENAIQMATSPDVNRVPGIGLFYTELVNGITPLFSHYISNLSSVHSVFVLISIKTLPVNRVTSSERFFFRYVGPKDSGMFRCVVRYGYKEDIEEPDEFERHFVYYLKEFIHHEHFMSGGGGEVDETDKEEEPNAETTVVPSSNY--------------VPSSGRIGSAHSSSSDKIRSGRVVQV----------QSVEDQTELVEKAREKGMVYLMGETEITAEKESSLFKK 748          

HSP 2 Score: 21.557 bits (44), Expect = 6.069e-30
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 3
Query:  858 SSALKKLVINYGYQF 902
            SS  KK ++N+ Y F
Sbjct:  743 SSLFKKFIVNHAYNF 757          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK20_ORYSJ (Potassium transporter 20 OS=Oryza sativa subsp. japonica GN=HAK20 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 2.866e-27
Identity = 62/166 (37.35%), Postives = 96/166 (57.83%), Query Frame = 2
Query:   44 EALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGP-RHYRIYRCIVRYGYRDVHKYDMEFEKDLVCTIAEFIRSGSV 538
            E LY S+ L KF EG ++P   + + + +M  WHY  +K+  ++L ++V  + +        + RV G+ L++TELV GIP +F   V K+P+ H V VF+ IK +PIP V P ERF+   +GP   +RI+RC+ RYGY D  +   EF   L+  +  F+   +V
Sbjct:  482 EFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDHIVPPDEMAALLARRDVRRVPGVGLLYTELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPIPRVAPAERFIFQRVGPDAGHRIFRCVARYGYTDPLEGAKEFAAFLLDRLKVFVYEEAV 647          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK19_ORYSJ (Potassium transporter 19 OS=Oryza sativa subsp. japonica GN=HAK19 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.573e-25
Identity = 64/188 (34.04%), Postives = 99/188 (52.66%), Query Frame = 2
Query:   35 GTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFL----IGHIGPRHYRIYRCIVRYGYRDVHKYDMEFEKDLVCTIAEFIRSGSVGINGANEDPYKDDDKM 586
            G  E LY S+ L KF EG ++P   + + + +M  WHY  +K+  ++L  +V             + RV G+ L+++ELV GIP +F   V K+P+ H V VF+ IK +P+P V P ERF+    +G      +R++RC+ RYGY D  +   EF   L+  +  F+   SV      ++   DDD M
Sbjct:  478 GLAEFLYLSSILSKFAEGGYLPFCFSLVLMALMATWHYVHVKRYWYELDRVVPAAETTALLARRDVRRVPGVGLLYSELVQGIPPVFPRLVDKIPSVHAVFVFMSIKHLPVPRVAPAERFIFRRVVGADAGAGHRLFRCVARYGYTDQLEGAKEFAAFLLDRLKVFVHEESVFACSRGDN--DDDDAM 663          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK26_ORYSJ (Potassium transporter 26 OS=Oryza sativa subsp. japonica GN=HAK26 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.279e-23
Identity = 53/147 (36.05%), Postives = 88/147 (59.86%), Query Frame = 2
Query:   38 TIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYD 478
            +IE +Y ++ + K L+G WVP A+   FLI+   W YG  KK +++L N++     +    T    RV G+ +  T++++GIP I  H+V  + +  +++VF+ I+ +P+  V PEERF+I  + P    +YRCIV+YGY D H  +
Sbjct:  507 SIEGIYMTSLMNKILQGGWVPFAITAFFLIITLSWTYGRSKKGEYELANVMEREEFIKTVTTRS--RVPGVCIFCTDMMNGIPPIVRHYVQHVASLRELMVFVTIRVLPVRTVLPEERFIIDKLEP--VGVYRCIVQYGYMDNHNME 649          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK17_ORYSJ (Probable potassium transporter 17 OS=Oryza sativa subsp. japonica GN=HAK17 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.242e-18
Identity = 43/141 (30.50%), Postives = 76/141 (53.90%), Query Frame = 2
Query:   41 IEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRD 463
            +E  Y SA   K  EG W+P A++    ++M  W+YG  +K ++++ N VS+  L        + RV G+   ++ +  G+  I SH++  + + H V +F+ ++S+ +  V   +R LI  +GP    +Y C V+YGY D
Sbjct:  466 MEGAYVSAVFTKIPEGGWLPFAVSITLAMIMFGWYYGRQRKFEYEMTNKVSLEHLGELLARPEVQRVPGLCFFYSNIQDGLTPILSHYIKNMSSLHTVTIFVTLRSLLVAKVDQSKRILINRLGPN--GVYGCTVQYGYAD 604          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK6_ORYSJ (Potassium transporter 6 OS=Oryza sativa subsp. japonica GN=HAK6 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.059e-17
Identity = 56/180 (31.11%), Postives = 90/180 (50.00%), Query Frame = 2
Query:   41 IEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIV----RVRGIALIHTELVSGIPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERFLIGHIGPRHYRIYRCIVRYGYRDVHKYDM---EFEKDLVCTIAEFIRSGSVGINGANE 559
            IE  Y ++ + K  +G WVP A+   FL V   W YG  KK +++ ++ V            GIV    RV G+ L  T+L+ G+P I  H+     +  ++L+F+  +++P+  V   ERFL+   G R   +YRCI +YGY D  + DM   +F +  V  + E   + +   +G  E
Sbjct:  509 IEGTYMTSLMTKVPQGGWVPFAITVAFLSVTLSWTYGRKKKREYEARHAVGDGEFA------GIVSRSARVPGMCLFCTDLMDGVPPIVRHYAANTGSLRELLLFVTFRTLPVRTVLAGERFLVAREGAR-AGVYRCIAQYGYMD--EQDMVGDDFVRAAVAALVEVAAAAAEADSGEEE 679          
BLAST of DY256923 vs. ExPASy Swiss-Prot
Match: HAK4_ORYSJ (Probable potassium transporter 4 OS=Oryza sativa subsp. japonica GN=HAK4 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.131e-14
Identity = 45/155 (29.03%), Postives = 81/155 (52.26%), Query Frame = 2
Query:   41 IEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKNKFDLQNMVSINWLLN*SPTLGIVRVRGIALIHTELVSG--IPEIFSHFVTKLPAFHQVLVFLCIKSVPIPHVTPEERF-LIGHIGPRHYRIYRCIVRYGYRDVHKYDMEFEKD 496
            +EA Y SA   K L G WVP A++     VM  W+YG  +K +++  N V++  L       G+ RV G+   ++    G  +  + +H++  + + H+V VFL ++ + +  V  ++R   +  +GP    +Y C ++YGY D     ++FE+D
Sbjct:  461 LEATYVSAVCTKILRGGWVPFAVSVALAAVMFGWYYGRQRKTEYEAANKVTLERLGELLSGPGLRRVPGLCFFYSNRQDGGWLTPVLAHYIRNMRSLHEVTVFLTLRYLLVAKVDGKDRVQAVRRLGPA--GVYGCTIQYGYADA----IDFEED 609          
The following BLAST results are available for this feature:
BLAST of DY256923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HAK27_ORYSJ2.505e-3140.51Potassium transporter 27 OS=Oryza sativa subsp. ja... [more]
HAK15_ORYSJ5.581e-3135.52Probable potassium transporter 15 OS=Oryza sativa ... [more]
HAK1_ORYSJ2.770e-3035.96Potassium transporter 1 OS=Oryza sativa subsp. jap... [more]
POT5_ARATH6.069e-3028.07Potassium transporter 5 OS=Arabidopsis thaliana GN... [more]
HAK20_ORYSJ2.866e-2737.35Potassium transporter 20 OS=Oryza sativa subsp. ja... [more]
HAK19_ORYSJ1.573e-2534.04Potassium transporter 19 OS=Oryza sativa subsp. ja... [more]
HAK26_ORYSJ3.279e-2336.05Potassium transporter 26 OS=Oryza sativa subsp. ja... [more]
HAK17_ORYSJ9.242e-1830.50Probable potassium transporter 17 OS=Oryza sativa ... [more]
HAK6_ORYSJ2.059e-1731.11Potassium transporter 6 OS=Oryza sativa subsp. jap... [more]
HAK4_ORYSJ2.131e-1429.03Probable potassium transporter 4 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DG12ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256923 ID=DY256923; Name=DY256923; organism=Citrus clementina; type=EST; length=1174bp
GTGTCTTTTTCAAATATTTTTTGTGTTCTTCTTTGGCACAATTGAAGCTC
TTTACTTCTCAGCTTCTCTCATCAAGTTCCTCGAAGGAGCGTGGGTTCCA
ATTGCCCTTGCATTTATCTTCCTGATTGTCATGTGTGTGTGGCACTATGG
CACCCTCAAAAAGAACAAGTTTGATCTGCAAAACATGGTCTCCATCAACT
GGCTACTTAATTAAAGTCCAACCCTAGGCATTGTACGGGTTCGTGGCATT
GCCCTCATACACACTGAACTTGTCTCTGGAATCCCTGAAATCTTCTCCCA
CTTTGTCACCAAACTTCCGGCCTTCCACCAGGTTTTAGTCTTCCTTTGTA
TTAAATCCGTGCCAATTCCTCATGTTACACCAGAGGAGAGGTTCCTAATT
GGTCATATTGGTCCAAGACACTATAGAATCTATAGGTGCATTGTAAGATA
TGGATATCGTGATGTTCACAAATATGACATGGAATTCGAGAAGGATCTTG
TCTGTACTATTGCAGAGTTCATACGCTCAGGAAGTGTTGGAATCAATGGT
GCAAATGAAGATCCGTATAAAGATGATGACAAAATGACAGTTGTGGGTAC
ATGCTCTAGCCATACATAAGGGATTCACATGAGTGAAGATGATGTCATAG
TAAACATACACTCCCCTGGCACGTCAGAATTAAGAGAGATACAGTCGCCA
ACCCAAATCAAACCGATGAAAATAGTGCGATTTGTTGTACCCGACAGCCC
GCAAATTGCCAGGGAGGCAATGAAAGATCTACAGGAACTTATGGAAGCTA
GGGCAGCTGGGATACCTTTACTATTAGGTCACTCGTACCTAAAAACTAAG
CAACGGGTCAAGTGCACTAAAAAAACTTGTAATTAATTATGGATATCAAT
TTCCTGAAGAGGAAACCCAAGGGTACCTGCAAAAGCTTAAAGTGTCCCCC
AATGCATCTACCCTGGAAAATGGGAAATGAATTCCCCATGTTTGAATATT
AATTTTGGATTCACACCAAAAATTTTAACCCCCAAAAGGAAAAAAGCATA
TGCCTAAAAAATGGTTTGGGAAAAAAAAAAAAAAAAACCCCACCTCTTCC
AAAAAAAAAAAAGGGGAAGAATATTAAAAAACCCCCCCCCAAAGGGTTTT
TTTTTTCTCCCCCCTTTTTGTGGG
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