DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1323..1588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PHASS (Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 7.767e-32
Identity = 64/87 (73.56%), Postives = 69/87 (79.31%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQVIAQLELWKE+++GKYEKKVYVLPKHLDEKV            T+LT  QADYISV  +GPYKP HYRY
Sbjct:  399 GCATGHPSFVMSSSFTNQVIAQLELWKERASGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTPSQADYISVPVEGPYKPAHYRY 485          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.499e-30
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+LTK Q+DYIS+  +GPYK   YRY
Sbjct:  399 GCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISIPIEGPYKLRLYRY 485          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PELCD (Adenosylhomocysteinase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.086e-25
Identity = 55/87 (63.22%), Postives = 65/87 (74.71%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+ELW+  ++ +YE KVYVLPK LDEKV            TR+T++QADY+ V  DGPYKP HYRY
Sbjct:  391 GCATGHPSFVMSNSFTNQVLAQIELWQ--NSDRYENKVYVLPKQLDEKVARLHLANLGVKLTRMTEKQADYLGVPVDGPYKPEHYRY 475          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.391e-25
Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  396 GCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.391e-25
Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  396 GCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.391e-25
Identity = 53/87 (60.92%), Postives = 63/87 (72.41%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  396 GCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 7.041e-25
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ +AQ++LW+++ T  YEKKVY+LPKHLDE+V            T LTK+QADY+ V  +GP+KP HYRY
Sbjct:  396 GCATGHPSFVMSNSFANQTLAQIDLWEKRDT--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVPVEGPFKPDHYRY 480          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_HALHL (Adenosylhomocysteinase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 9.196e-25
Identity = 57/87 (65.52%), Postives = 64/87 (73.56%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+   + GKYEK VYVLPKHLDEKV            TRL++EQA YI VS DGP+KP  YRY
Sbjct:  346 GCATGHPSFVMSNSFTNQVMAQMELYN--NPGKYEKDVYVLPKHLDEKVAALHLGRVGANLTRLSEEQAGYIGVSVDGPFKPEWYRY 430          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_RALME (Adenosylhomocysteinase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ahcY PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.201e-24
Identity = 53/87 (60.92%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPS+VMS SF NQ IAQ+ELW E+ +GKY   VYVLPKHLDEKV            T LT++QA YI V  +GPYK  HYRY
Sbjct:  386 GCATGHPSYVMSSSFANQTIAQIELWAERDSGKYPVGVYVLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_XANCP (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris GN=ahcY PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.569e-24
Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ +AQ++LW+++ +  YEKKVY+LPKHLDE+V            T LTK+QADY+ V   GPYKP HYRY
Sbjct:  396 GCATGHPSFVMSNSFANQTLAQIDLWEKRDS--YEKKVYILPKHLDEEVARLHLEKIGVKLTTLTKDQADYLGVDVAGPYKPDHYRY 480          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_PHASS7.767e-3273.56Adenosylhomocysteinase OS=Phalaenopsis sp. GN=SAHH... [more]
SAHH_WHEAT2.499e-3071.26Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_PELCD1.086e-2563.22Adenosylhomocysteinase OS=Pelobacter carbinolicus ... [more]
SAHH_XANOP5.391e-2560.92Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM5.391e-2560.92Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANAC5.391e-2560.92Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_XANC57.041e-2559.77Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_HALHL9.196e-2565.52Adenosylhomocysteinase OS=Halorhodospira halophila... [more]
SAHH_RALME1.201e-2460.92Adenosylhomocysteinase OS=Ralstonia metallidurans ... [more]
SAHH_XANCP1.569e-2459.77Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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