DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_COREF (Adenosylhomocysteinase OS=Corynebacterium efficiens GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.222e-20
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV            T LTKEQA+YI V   GP+KP HYRY
Sbjct:  394 GNATGHPSFVMSTSFADQTIAQIELFQNE--GQYENQVYRLPKILDEKVARIHVEALGGKLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BARHE (Adenosylhomocysteinase OS=Bartonella henselae GN=ahcY PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.222e-20
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+AQ+EL+    +G Y+ +V VLPK+LDEKV            T L++EQA YI V+  GPYKP HYRY
Sbjct:  381 GNATGHPSFVMSASFTNQVLAQIELFTR--SGHYKNEVTVLPKYLDEKVARLHLDQLGIKLTTLSQEQAAYIGVTPQGPYKPDHYRY 465          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.820e-20
Identity = 53/87 (60.92%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ IAQ+EL+  KS      KVYVLPKHLDEKV            T LT EQA YI VS  GPYK   YRY
Sbjct:  392 GCATGHPSFVMSSSFANQTIAQIELFT-KSADYQVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDEQAAYIGVSKSGPYKADTYRY 477          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 6.820e-20
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V            T+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  348 GCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY 432          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_DESAD (Adenosylhomocysteinase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.820e-20
Identity = 50/87 (57.47%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ++L K     +YE KV +L K LDE+V              L+KEQADYISV  +GPYKP HYRY
Sbjct:  390 GCATGHPSFVMSNSFTNQALAQIDLAK----NEYEPKVMILSKKLDEEVARLHLERLGVELDVLSKEQADYISVDVEGPYKPDHYRY 472          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.820e-20
Identity = 49/87 (56.32%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQ +AQ+EL+ +   G+Y+ +VYVLPKHLDEKV            T L+ EQA YI V+  GP+K  HYRY
Sbjct:  382 GNATGHPSFVMSASFTNQTLAQIELFTKP--GQYQNQVYVLPKHLDEKVARLHLGKLGVKLTELSGEQAAYIGVTPQGPFKSDHYRY 466          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MACFA (Adenosylhomocysteinase OS=Macaca fascicularis GN=AHCY PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V            T+LT++QA Y+ +S DGP+KP HYRY
Sbjct:  348 GCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSRDGPFKPDHYRY 432          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_CORGL (Adenosylhomocysteinase OS=Corynebacterium glutamicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV            T LTKEQA+YI V   GP+KP HYRY
Sbjct:  390 GNATGHPSFVMSNSFADQTIAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 474          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_CORGB (Adenosylhomocysteinase OS=Corynebacterium glutamicum (strain R) GN=ahcY PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20
Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q IAQ+EL++ +  G+YE +VY LPK LDEKV            T LTKEQA+YI V   GP+KP HYRY
Sbjct:  394 GNATGHPSFVMSNSFADQTIAQIELFQNE--GQYENEVYRLPKVLDEKVARIHVEALGGQLTELTKEQAEYIGVDVAGPFKPEHYRY 478          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BOVIN (Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 8.907e-20
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V            T+LT++QA Y+ VS +GP+KP HYRY
Sbjct:  348 GCAMGHPSFVMSNSFTNQVLAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGVSREGPFKPDHYRY 432          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_COREF5.222e-2057.47Adenosylhomocysteinase OS=Corynebacterium efficien... [more]
SAHH_BARHE5.222e-2057.47Adenosylhomocysteinase OS=Bartonella henselae GN=a... [more]
SAHH_METPP6.820e-2060.92Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_HUMAN6.820e-2055.17Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]
SAHH_DESAD6.820e-2057.47Adenosylhomocysteinase OS=Desulfovibrio salexigens... [more]
SAHH_AGRRK6.820e-2056.32Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_MACFA8.907e-2055.17Adenosylhomocysteinase OS=Macaca fascicularis GN=A... [more]
SAHH_CORGL8.907e-2057.47Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_CORGB8.907e-2057.47Adenosylhomocysteinase OS=Corynebacterium glutamic... [more]
SAHH_BOVIN8.907e-2055.17Adenosylhomocysteinase OS=Bos taurus GN=AHCY PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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