DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BRUA1 (Adenosylhomocysteinase OS=Brucella abortus (strain S19) GN=ahcY PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.984e-19
Identity = 49/87 (56.32%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+ Q+EL+    T  Y+ +VYVLPKHLDEKV            T L++EQA YI V+  GP+K  HYRY
Sbjct:  382 GNATGHPSFVMSASFTNQVLGQIELFTR--TDAYKNEVYVLPKHLDEKVARLHLDKLGAKLTVLSEEQAAYIGVTPQGPFKSEHYRY 466          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19
Identity = 51/87 (58.62%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV            T LT +QA YI V  +GPYKP  YRY
Sbjct:  392 GCATGHPSFVMSSSFANQTIAQIELFCHPD-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDDQAAYIGVPKNGPYKPDTYRY 477          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19
Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+AQ+ELW+ K        VY LPKHLDEKV            T+L+ +QA+YI VS  GP+K   YRY
Sbjct:  354 GNATGHPSFVMSASFTNQVLAQIELWQAKPGQYLPNHVYTLPKHLDEKVAALHLAKVGAKLTKLSDKQAEYIGVSQAGPFKHDLYRY 440          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_AZOSE (Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19
Identity = 48/87 (55.17%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPS+VMS SF NQ IAQ+EL+    T  Y   VY LPKHLDEKV            T L  +QA YI V  +GPYK  HYRY
Sbjct:  386 GCATGHPSYVMSSSFANQTIAQIELFTR--TADYPVGVYTLPKHLDEKVARLQLKKLNAQLTELRPDQAAYIGVPVEGPYKSAHYRY 470          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_ANOGA (Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahcy13 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.385e-19
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GH SFVMS SFTNQV+AQ+ELW  +   +Y   V+VLPK LDE+V            T+L+  QA+Y+++ A+GPYKP HYRY
Sbjct:  348 GCAMGHSSFVMSNSFTNQVLAQIELWTNRE--QYAIGVHVLPKKLDEEVAALHLDKLGVKLTKLSARQAEYLNLPAEGPYKPEHYRY 432          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_STRAZ (Adenosylhomocysteinase OS=Streptomyces atroolivaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.421e-19
Identity = 49/87 (56.32%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV            T L  EQA YI V  DGPYKP HYRY
Sbjct:  385 GNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVEVDGPYKPDHYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_STRFR (Adenosylhomocysteinase (Fragment) OS=Streptomyces fradiae GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.774e-19
Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV            T L  EQA+YI V  +GPYKP HYRY
Sbjct:   36 GNATGHPSFVMSNSFADQTLAQIELYTKPE--QYPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAEYIGVEVEGPYKPDHYRY 120          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_SINMW (Adenosylhomocysteinase OS=Sinorhizobium medicae (strain WSM419) GN=ahcY PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.541e-19
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF+NQV+AQ+EL+ +     Y+ +VYVLPK LDEKV            T L++EQA YI V A GP+K  HYRY
Sbjct:  382 GNATGHPSFVMSASFSNQVLAQIELFTKGEN--YKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY 466          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18
Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF+NQV+AQ+EL+ +    +Y+ +VYVLPK LDEKV            T L++EQA YI V   GP+K  HYRY
Sbjct:  382 GNATGHPSFVMSASFSNQVLAQIELFTKGE--QYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQASYIGVKQQGPFKAEHYRY 466          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_RAT (Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18
Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V            T+LT++QA Y+ +  +GP+KP HYRY
Sbjct:  348 GCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 432          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_BRUA11.984e-1956.32Adenosylhomocysteinase OS=Brucella abortus (strain... [more]
SAHH_LEPCP3.385e-1958.62Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_GRABC3.385e-1955.17Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]
SAHH_AZOSE3.385e-1955.17Adenosylhomocysteinase OS=Azoarcus sp. (strain EbN... [more]
SAHH_ANOGA3.385e-1952.87Adenosylhomocysteinase OS=Anopheles gambiae GN=Ahc... [more]
SAHH_STRAZ4.421e-1956.32Adenosylhomocysteinase OS=Streptomyces atroolivace... [more]
SAHH_STRFR5.774e-1955.17Adenosylhomocysteinase (Fragment) OS=Streptomyces ... [more]
SAHH_SINMW7.541e-1955.17Adenosylhomocysteinase OS=Sinorhizobium medicae (s... [more]
SAHH_RHIME1.286e-1854.02Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_RAT1.286e-1852.87Adenosylhomocysteinase OS=Rattus norvegicus GN=Ahc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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