DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MOUSE (Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18
Identity = 46/87 (52.87%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCA GHPSFVMS SFTNQV+AQ+ELW      KY   V+ LPK LDE V            T+LT++QA Y+ +  +GP+KP HYRY
Sbjct:  348 GCAMGHPSFVMSNSFTNQVMAQIELWTHPD--KYPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMPINGPFKPDHYRY 432          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BART1 (Adenosylhomocysteinase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18
Identity = 49/87 (56.32%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+AQ+EL+       Y  +V VLPK+LDEKV            T L++EQA YI V+  GPYKP HYRY
Sbjct:  381 GNATGHPSFVMSASFTNQVLAQIELFTRAE--HYTNEVTVLPKNLDEKVARLHLDRLGIKLTVLSEEQAAYIGVTPQGPYKPNHYRY 465          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_DIAST (Adenosylhomocysteinase OS=Diaphorobacter sp. (strain TPSY) GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18
Identity = 50/87 (57.47%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GC TGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV            T L+ EQA YI V   GPYKP  YRY
Sbjct:  391 GCGTGHPSFVMSNSFANQTIAQIELFTHPE-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVPKQGPYKPDTYRY 476          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18
Identity = 52/88 (59.09%), Postives = 55/88 (62.50%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SF NQ IAQ+EL+ +     YE  KVYVLPK LDEKV            T LT  QA YI VS  GPYKP  YRY
Sbjct:  391 GCATGHPSFVMSASFANQTIAQIELFTKPDA--YEVGKVYVLPKILDEKVARLHLKKVGAMLTELTDGQAAYIGVSKQGPYKPETYRY 476          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_ACISJ (Adenosylhomocysteinase OS=Acidovorax sp. (strain JS42) GN=ahcY PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.680e-18
Identity = 50/87 (57.47%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GC TGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV            T L+ EQA YI V   GPYKP  YRY
Sbjct:  391 GCGTGHPSFVMSNSFANQTIAQIELFTHPE-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELSDEQAAYIGVPKQGPYKPDTYRY 476          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_STRCO (Adenosylhomocysteinase OS=Streptomyces coelicolor GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.194e-18
Identity = 48/87 (55.17%), Postives = 55/87 (63.22%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q +AQ+EL+ +    +Y   VYVLPKHLDEKV            T L  EQADYI V  +GPYK  HYRY
Sbjct:  401 GNATGHPSFVMSNSFADQTLAQIELFTKPD--EYPTDVYVLPKHLDEKVARLHLDSLGVKLTTLRPEQADYIGVKVEGPYKADHYRY 485          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_STRGG (Adenosylhomocysteinase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.742e-18
Identity = 48/87 (55.17%), Postives = 54/87 (62.07%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q +AQ+EL+ +     Y   VYVLPKHLDEKV            T L  EQA YI V  +GPYKP HYRY
Sbjct:  401 GNATGHPSFVMSNSFADQTLAQIELFTKPED--YPTDVYVLPKHLDEKVARLHLDALGVKLTTLRPEQAAYIGVEVEGPYKPDHYRY 485          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BARQU (Adenosylhomocysteinase OS=Bartonella quintana GN=ahcY PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.742e-18
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+AQ+EL+       Y+ +V VLPK LDEKV            + L++EQA YI V+  GPYKP HYRY
Sbjct:  381 GNATGHPSFVMSASFTNQVLAQIELFTRAE--HYKNEVTVLPKRLDEKVARLHLDRLGVKLSVLSEEQAVYIGVTPQGPYKPNHYRY 465          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_STRAA (Adenosylhomocysteinase OS=Streptomyces argillaceus GN=ahcY PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.888e-18
Identity = 48/87 (55.17%), Postives = 53/87 (60.92%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF +Q +AQ+EL+ +   G Y   VY LPKHLDEKV            T L  EQA YI V  DGPYK  HYRY
Sbjct:  398 GNATGHPSFVMSNSFADQTLAQIELFTKP--GDYPTGVYTLPKHLDEKVARLHLDALGVKLTTLRPEQASYIGVDVDGPYKSDHYRY 482          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_YEAST (Adenosylhomocysteinase OS=Saccharomyces cerevisiae GN=SAH1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.857e-17
Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKE------------KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGH SFVMSCSF+NQV+AQ+ L+K             + TG +E  V+VLPK LDE V            T+L+K Q++Y+ +  +GP+K  HYRY
Sbjct:  351 GCATGHSSFVMSCSFSNQVLAQIALFKSNDKSFREKHIEFQKTGPFEVGVHVLPKILDEAVAKFHLGNLGVRLTKLSKVQSEYLGIPEEGPFKADHYRY 449          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_MOUSE1.286e-1852.87Adenosylhomocysteinase OS=Mus musculus GN=Ahcy PE=... [more]
SAHH_BART11.286e-1856.32Adenosylhomocysteinase OS=Bartonella tribocorum (s... [more]
SAHH_DIAST1.680e-1857.47Adenosylhomocysteinase OS=Diaphorobacter sp. (stra... [more]
SAHH_DELAS1.680e-1859.09Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_ACISJ1.680e-1857.47Adenosylhomocysteinase OS=Acidovorax sp. (strain J... [more]
SAHH_STRCO2.194e-1855.17Adenosylhomocysteinase OS=Streptomyces coelicolor ... [more]
SAHH_STRGG3.742e-1855.17Adenosylhomocysteinase OS=Streptomyces griseus sub... [more]
SAHH_BARQU3.742e-1855.17Adenosylhomocysteinase OS=Bartonella quintana GN=a... [more]
SAHH_STRAA4.888e-1855.17Adenosylhomocysteinase OS=Streptomyces argillaceus... [more]
SAHH_YEAST1.857e-1745.45Adenosylhomocysteinase OS=Saccharomyces cerevisiae... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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