DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEMY (Adenosylhomocysteinase OS=Pseudomonas mendocina (strain ymp) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.510e-14
Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-KYEKK-----VYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+++K      EKK     V VLPK LDE+V            T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFEQKFADLPAEKKAERLTVEVLPKKLDEEVALEMVKGFGGVVTQLTKQQAEYIGVTVEGPFKPDTYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPF (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.278e-14
Identity = 45/93 (48.39%), Postives = 57/93 (61.29%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-----KYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V            T+LTK+QADYI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQADYIGVTVEGPFKPHAYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.282e-14
Identity = 44/93 (47.31%), Postives = 54/93 (58.06%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKK------VYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+ +K       K      V VLPK LDE+V            T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFDQKYADLAPAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTKLTKTQADYIGVTVEGPFKPDAYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU5 (Adenosylhomocysteinase OS=Pseudomonas stutzeri (strain A1501) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.304e-14
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEK------STGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+ EK      +       V VLPK LDE+V            T+LT +QA+YI V+ +GP+KP  YRY
Sbjct:  376 GNATGHPSRIMDGSFANQVLAQIHLYNEKFADLPVAEKTQNVTVMVLPKKLDEEVALEMVKGFGGVVTQLTAKQAEYIGVAVEGPFKPDSYRY 468          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEFS (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain SBW25) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.304e-14
Identity = 45/93 (48.39%), Postives = 56/93 (60.22%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-----KYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V            T+LTK QADYI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKTQADYIGVTVEGPFKPHAYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.539e-14
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+++K     +  K ++  V VLPK LDE+V            T+LT +QA+YI VS +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIHLFEQKYADLPAAEKAKRLSVEVLPKKLDEEVALEMVKGFGGVVTQLTPKQAEYIGVSVEGPFKPDTYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.246e-13
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTG-----KYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+ +K        K E+  V VLPK LDE+V            T+LTK+QA+YI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFGQKYADLSPAQKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTKQQAEYIGVTVEGPFKPDAYRY 469          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PSEE4 (Adenosylhomocysteinase OS=Pseudomonas entomophila (strain L48) GN=ahcY PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.627e-13
Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEK-----STGKYEK-KVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPS +M  SF NQV+AQ+ L+++K     +  K E+  V VLPK LDE+V            T+LT +QA+YI V+ +GP+KP  YRY
Sbjct:  377 GNATGHPSRIMDGSFANQVLAQIFLFEQKFAELPAAKKAERLTVEVLPKKLDEEVALEMVRGFGGVVTQLTPQQAEYIGVTVEGPFKPDAYRY 469          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_PSEMY2.510e-1448.39Adenosylhomocysteinase OS=Pseudomonas mendocina (s... [more]
SAHH_PSEPF3.278e-1448.39Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSESM4.282e-1447.31Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEU57.304e-1445.16Adenosylhomocysteinase OS=Pseudomonas stutzeri (st... [more]
SAHH_PSEFS7.304e-1448.39Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEAE9.539e-1446.24Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB9.539e-1446.24Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA89.539e-1446.24Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEF51.246e-1347.31Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEE41.627e-1346.24Adenosylhomocysteinase OS=Pseudomonas entomophila ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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