DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1323..1588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PROM0 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 55/87 (63.22%), Postives = 63/87 (72.41%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V            T+LTKEQADYISVS +GPYK   YRY
Sbjct:  388 GCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYISVSVEGPYKSEFYRY 472
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_GRAFK (Adenosylhomocysteinase OS=Gramella forsetii (strain KT0803) GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+ELWK  +T +Y+ +VY+LPKHLDEKV            T L ++QA+YI V+ +GPYKP +YRY
Sbjct:  354 GCATGHPSFVMSNSFTNQTLAQIELWK--NTDEYKNEVYMLPKHLDEKVAKLHLERIGVELTELKQDQAEYIGVTVEGPYKPEYYRY 438
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_CHRVO (Adenosylhomocysteinase OS=Chromobacterium violaceum GN=ahcY PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.328e-23
Identity = 56/87 (64.37%), Postives = 61/87 (70.11%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+      KYEKKVYVLPKHLDEKV            T L+ +QA YISV   GPYKP HYRY
Sbjct:  382 GCATGHPSFVMSNSFTNQVLAQIELFANGH--KYEKKVYVLPKHLDEKVARLHLARIGARLTELSDQQAAYISVPKQGPYKPDHYRY 466
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.734e-23
Identity = 54/87 (62.07%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  392 GCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.265e-23
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V            T LTK+QADYISV  +GPYKP HYRY
Sbjct:  392 GCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MESSB (Adenosylhomocysteinase OS=Mesorhizobium sp. (strain BNC1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.265e-23
Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQV+AQ+ELW   S  +YE KVYVLPKHLDEKV            T+L+ EQA YI V+ +GP+KP HYRY
Sbjct:  381 GNATGHPSFVMSASFTNQVLAQIELWTRGS--QYENKVYVLPKHLDEKVARLHLAKLGANLTKLSPEQAAYIGVTPEGPFKPDHYRY 465
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIN (Adenosylhomocysteinase OS=Leptospira interrogans GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.265e-23
Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMSCSFTNQV+AQ+EL+  K    YE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP HYRY
Sbjct:  354 GCATGHPSFVMSCSFTNQVLAQIELYNNK----YELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_LEPIC (Adenosylhomocysteinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.265e-23
Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMSCSFTNQV+AQ+EL+  K    YE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP HYRY
Sbjct:  354 GCATGHPSFVMSCSFTNQVLAQIELYNNK----YELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY 436
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.958e-23
Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V            T L+K+QADYI+V  +GPYKP HYRY
Sbjct:  392 GCATGHPSFVMSNSFTNQVLAQIELFTKAN--EYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476
[Close]
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_CHLP8 (Adenosylhomocysteinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=ahcY PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.958e-23
Identity = 53/87 (60.92%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+ELWK      Y+  VY LPKHLDE+V            T L+KEQADYI V  +GPYKP HYRY
Sbjct:  389 GCATGHPSFVMSNSFTNQTLAQIELWKNN----YDVDVYRLPKHLDEEVARLHLGQIGVKLTTLSKEQADYIGVPVEGPYKPEHYRY 471
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_PROM01.328e-2363.22Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_GRAFK1.328e-2358.62Adenosylhomocysteinase OS=Gramella forsetii (strai... [more]
SAHH_CHRVO1.328e-2364.37Adenosylhomocysteinase OS=Chromobacterium violaceu... [more]
SAHH_SYNS31.734e-2362.07Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_PROMM2.265e-2362.07Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_MESSB2.265e-2362.07Adenosylhomocysteinase OS=Mesorhizobium sp. (strai... [more]
SAHH_LEPIN2.265e-2359.77Adenosylhomocysteinase OS=Leptospira interrogans G... [more]
SAHH_LEPIC2.265e-2359.77Adenosylhomocysteinase OS=Leptospira interrogans s... [more]
SAHH_SYNS92.958e-2360.92Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_CHLP82.958e-2360.92Adenosylhomocysteinase OS=Chlorobaculum parvum (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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