DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.124e-22
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF+NQVIAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+YI V  DGPYK  HYRY
Sbjct:  412 GNATGHPSFVMSNSFSNQVIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGELTKLTKEQAEYIGVDVDGPYKADHYRY 496          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_METCA (Adenosylhomocysteinase OS=Methylococcus capsulatus GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.124e-22
Identity = 54/87 (62.07%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+EL+   +  KYE KVYVLPKHLDEKV            T L+ EQA YI V  +GPYKP HYRY
Sbjct:  388 GCATGHPSFVMSNSFTNQTLAQIELFCHGA--KYENKVYVLPKHLDEKVARLHLKKIGARLTELSDEQAAYIGVPKEGPYKPDHYRY 472          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBL (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.124e-22
Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMSCSFTNQV+AQ+EL+  K    YE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP +YRY
Sbjct:  354 GCATGHPSFVMSCSFTNQVLAQIELYNNK----YELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_LEPBJ (Adenosylhomocysteinase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=ahcY PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.124e-22
Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMSCSFTNQV+AQ+EL+  K    YE  VY LPKHLDEKV            T+L ++QADY+ V  +GP+KP +YRY
Sbjct:  354 GCATGHPSFVMSCSFTNQVLAQIELYNNK----YELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPLNGPFKPENYRY 436          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GP+K  HYRY
Sbjct:  385 GNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22
Identity = 53/89 (59.55%), Postives = 58/89 (65.17%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV            T LT +QA YI VS +GPYK  HYRY
Sbjct:  386 GCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BURXL (Adenosylhomocysteinase OS=Burkholderia xenovorans (strain LB400) GN=ahcY PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.468e-22
Identity = 53/87 (60.92%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+EL+ + +  KYE KVYVLPKHLDEKV            T L+ EQA YI V  +GP+KP HYRY
Sbjct:  389 GCATGHPSFVMSNSFTNQTLAQIELFTQGN--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDEQAGYIGVDKNGPFKPNHYRY 473          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTU (Adenosylhomocysteinase OS=Mycobacterium tuberculosis GN=ahcY PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 2.504e-22
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  411 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCTA (Adenosylhomocysteinase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.504e-22
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  411 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCBT (Adenosylhomocysteinase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.504e-22
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTKEQA+Y+ V  +GPYKP HYRY
Sbjct:  411 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGHLTKLTKEQAEYLGVDVEGPYKPDHYRY 495          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_MYCPA1.124e-2260.92Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_METCA1.124e-2262.07Adenosylhomocysteinase OS=Methylococcus capsulatus... [more]
SAHH_LEPBL1.124e-2258.62Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_LEPBJ1.124e-2258.62Adenosylhomocysteinase OS=Leptospira borgpeterseni... [more]
SAHH_RHOPS1.468e-2258.62Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RALPJ1.468e-2259.55Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_BURXL1.468e-2260.92Adenosylhomocysteinase OS=Burkholderia xenovorans ... [more]
SAHH_MYCTU2.504e-2258.62Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCTA2.504e-2258.62Adenosylhomocysteinase OS=Mycobacterium tuberculos... [more]
SAHH_MYCBT2.504e-2258.62Adenosylhomocysteinase OS=Mycobacterium bovis (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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