DY256924

Overview
NameDY256924
Unique NameDY256924
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length266
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1323..1588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V            T LT++QADYI V  +GP+K  HYRY
Sbjct:  354 GCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BURPP (Adenosylhomocysteinase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22
Identity = 52/87 (59.77%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+EL+ +    KYE KVYVLPKHLDEKV            T L+ +QA YI V  +GP+KP HYRY
Sbjct:  389 GCATGHPSFVMSNSFTNQTLAQIELFTQGE--KYENKVYVLPKHLDEKVARLHLARIGANLTVLSDDQAGYIGVDKNGPFKPNHYRY 473          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.272e-22
Identity = 51/87 (58.62%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV            T L K+QADYI V  +GPYK  HYRY
Sbjct:  387 GNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+EL+K+  +  Y+  VYVLPKHLDE V            T L+KEQADYI+V  +GPYK   YRY
Sbjct:  392 GCATGHPSFVMSNSFTNQVLAQIELFKKGDS--YQNNVYVLPKHLDEMVARLHLDKIGANLTELSKEQADYINVPIEGPYKSEQYRY 476          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_POLSQ (Adenosylhomocysteinase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 50/87 (57.47%), Postives = 56/87 (64.37%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GC TGHPS+VMS SF NQVIAQ+ELW    T KY   VY LPKHLDEKV            T L+ +QA YI V+ +GPYK  HYRY
Sbjct:  395 GCGTGHPSYVMSSSFANQVIAQIELWNAVGTDKYPIGVYTLPKHLDEKVARLQLKTLNAELTVLSDQQASYIGVTKEGPYKADHYRY 481          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_NITEU (Adenosylhomocysteinase OS=Nitrosomonas europaea GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 53/88 (60.23%), Postives = 61/88 (69.32%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V            T LT EQA Y+++  +GPYKP  YRY
Sbjct:  394 GCATGHPSFVMSSSFTNQVLAQIELWQN---GKDYQKKVYVLPKRLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_NITEC (Adenosylhomocysteinase OS=Nitrosomonas eutropha (strain C91) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 53/88 (60.23%), Postives = 61/88 (69.32%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGK-YEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQV+AQ+ELW+    GK Y+KKVYVLPK LDE V            T LT EQA Y+++  +GPYKP  YRY
Sbjct:  394 GCATGHPSFVMSSSFTNQVLAQMELWQN---GKDYQKKVYVLPKQLDEMVARLHLGKLGVKLTELTDEQAHYLNLDKNGPYKPEMYRY 478          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  408 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 50/87 (57.47%), Postives = 60/87 (68.97%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            G ATGHPSFVMS SF NQ IAQ+ELW +    +Y+ +VY LPKHLDEKV            T+LTK+QA+Y+ V  +GPYKP HYRY
Sbjct:  408 GNATGHPSFVMSNSFANQTIAQIELWTKND--EYDNEVYRLPKHLDEKVARIHVEALGGRLTKLTKDQAEYLGVDVEGPYKPDHYRY 492          
BLAST of DY256924 vs. ExPASy Swiss-Prot
Match: SAHH_BACTN (Adenosylhomocysteinase OS=Bacteroides thetaiotaomicron GN=ahcY PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.579e-22
Identity = 53/87 (60.92%), Postives = 59/87 (67.82%), Query Frame = 1
Query:    1 GCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISVSADGPYKPLHYRY 261
            GCATGHPSFVMS SFTNQ +AQ+EL+ +K    YE  VY LPKHLDE+V            T+LT EQA YI VS DGPYK  HYRY
Sbjct:  394 GCATGHPSFVMSNSFTNQTLAQIELFNKK----YEVNVYRLPKHLDEEVARLHLEKIGVKLTKLTPEQAAYIGVSVDGPYKAEHYRY 476          
The following BLAST results are available for this feature:
BLAST of DY256924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
SAHH_COXB14.272e-2259.77Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_BURPP4.272e-2259.77Adenosylhomocysteinase OS=Burkholderia phytofirman... [more]
SAHH_BRAJA4.272e-2258.62Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_PROMA5.579e-2259.77Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_POLSQ5.579e-2257.47Adenosylhomocysteinase OS=Polynucleobacter sp. (st... [more]
SAHH_NITEU5.579e-2260.23Adenosylhomocysteinase OS=Nitrosomonas europaea GN... [more]
SAHH_NITEC5.579e-2260.23Adenosylhomocysteinase OS=Nitrosomonas eutropha (s... [more]
SAHH_MYCUA5.579e-2257.47Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM5.579e-2257.47Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_BACTN5.579e-2260.92Adenosylhomocysteinase OS=Bacteroides thetaiotaomi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2DH03ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256924 ID=DY256924; Name=DY256924; organism=Citrus clementina; type=EST; length=266bp
GGATGTGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAA
CCAGGTGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGT
ACGAGAAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCT
GCTCTTCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGA
GCAGGCTGACTACATCAGTGTGTCCGCCGATGGTCCTTACAAGCCTCTTC
ACTACAGGTACTAAGC
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