DY256927

Overview
NameDY256927
Unique NameDY256927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1069
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY256927_ssr43 microsatellite DY256927_ssr43:43..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD2_HUMAN (Adenylate kinase 2, mitochondrial OS=Homo sapiens GN=AK2 PE=1 SV=2)

HSP 1 Score: 243.047 bits (619), Expect = 2.181e-63
Identity = 113/212 (53.30%), Postives = 158/212 (74.53%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALS 853
            R +L+GPPG+GKGTQ+P + + +C+CHLATGDMLRA VA+ + LG K K  MD G+LVSD++VV +I++ ++ P C+ GF+LDGFPRT  QA+ LD+++EK+ +K+D V+ F+I D++L  RITGR IHP SGR+YH +F PPK P  DD+TGEPLI+R DD    LK RL+A+H QT P+I+YY K+GI + + A + P  V + +  A S
Sbjct:   17 RAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFS 228          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_COPC7 (Adenylate kinase 1 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=ADK1 PE=3 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 2.181e-63
Identity = 119/204 (58.33%), Postives = 149/204 (73.04%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEV 826
            R IL+GPPG+GKGTQ+P I+DE+C+CHLATGDMLR  V  KTPLGI AK+ MD G LVSDD++V +I D+     +C+ GF+LDGFPRT  QAQKLD ML ++ +K+D V+   IDD +L  RITGR IHP+SGR+YH  F PPK  G+DD+TGEPLIQR DD A  L  RL+ +H QT PV+DYY  KG+   + A + P  V
Sbjct:   41 RTILIGPPGAGKGTQAPRIRDEFCVCHLATGDMLRDQVEKKTPLGIAAKKIMDAGGLVSDDIMVNMIKDQLENNEACKNGFVLDGFPRTVPQAQKLDGMLAERKEKLDSVVQLLIDDQLLISRITGRLIHPASGRSYHKIFNPPKKAGIDDLTGEPLIQRSDDNAETLTRRLKTYHTQTGPVVDYYKAKGLWHGVDAAQSPSVV 244          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD2_XENTR (Adenylate kinase 2, mitochondrial OS=Xenopus tropicalis GN=ak2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.849e-63
Identity = 114/212 (53.77%), Postives = 156/212 (73.58%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALS 853
            R IL+GPPG+GKGTQ+P + ++YC+CHLATGDMLRA VA+ + LG++ K  MD G+LVSD++VV +I++ +  P C+KGF+LDGFPRT  QA+ LDE+LEK+ +K+D V+ F +DD++L  RI GR IH SSGR+YH +F PPK    DDVTGEPL++R DD    LKSRLEA+H  T P+++YY + GI   + A + P  V + +  A S
Sbjct:   19 RAILLGPPGAGKGTQAPKLAEKYCVCHLATGDMLRAMVASGSELGMRLKATMDAGKLVSDEMVVELIEKNLDTPPCKKGFLLDGFPRTVKQAEMLDELLEKRQEKLDSVIEFKVDDSLLVRRICGRLIHASSGRSYHEEFNPPKEAMKDDVTGEPLMRRSDDNETTLKSRLEAYHTMTSPLVEYYQRHGIHTAVDAAQSPDVVFASILAAFS 230          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_PICST (Adenylate kinase 1 OS=Pichia stipitis GN=ADK1 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.849e-63
Identity = 115/212 (54.25%), Postives = 153/212 (72.17%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            R++L+GPPG+GKGTQ+P +K+++C CHLATGDMLRA VAAKT LG++AK+ MD+G LVSD+++V +I  E      C  GFILDGFPRT  QA+KLD ML  +   ++  +   IDD +L  RITGR +HP+SGR+YH  F PPK   +DD+TGEPL+QR DD  A LK RL  +HKQTEP++DYY K GI + + A + P  V +++ K L
Sbjct:   35 RMVLIGPPGAGKGTQAPNLKEKFCACHLATGDMLRAQVAAKTALGVEAKKIMDQGGLVSDEIMVNMIKSELENNKECANGFILDGFPRTIPQAEKLDSMLVDRKTPLENAIELKIDDELLVARITGRLVHPASGRSYHKLFNPPKKNMIDDITGEPLVQRSDDNEAALKKRLVTYHKQTEPIVDYYRKTGIWSGIDASQKPATVWTDILKCL 246          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_PENMA (Adenylate kinase 1 OS=Penicillium marneffei GN=adk1 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 4.859e-63
Identity = 115/204 (56.37%), Postives = 152/204 (74.51%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEV 826
            R+IL+GPPG+GKGTQ+P +K++YC+CHLATGDMLR+ VA KTPLG +AK+ MD+G LVSD+++V +I   ++  S C+ GFILDGFPRT  QA++LD+ML  + +K+   +   IDDA+L  RITGR +HP+SGR+YH  F PPK    DD+TGEPLIQR DD AA L+ RL  +H QT PV+DYY K GI   + A + P +V
Sbjct:   47 RIILIGPPGAGKGTQAPRLKEKYCVCHLATGDMLRSQVAKKTPLGKEAKKIMDQGGLVSDEIMVNMIKSELETNSECKNGFILDGFPRTVAQAERLDDMLSARNEKLQHAVELQIDDALLVARITGRLVHPASGRSYHKIFNPPKQDMKDDITGEPLIQRSDDNAATLEKRLATYHAQTSPVVDYYKKTGIWCGIDASQEPGQV 250          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD2_DANRE (Adenylate kinase 2, mitochondrial OS=Danio rerio GN=ak2 PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.346e-63
Identity = 112/213 (52.58%), Postives = 157/213 (73.71%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALSA 856
            R IL+GPPG+GKGTQ+P + ++YC+CHLATGDMLRA VA+ + LG + KE MD G+LVSD++VV +ID  +  P+C+ GF+LDGFPRT  QA+ LD+++EK+ +K+D V+ F++DD++L  RI GR IH  SGR+YH +F PPK    DDVTGEPLI+R DD    L+SRLE++H+QT P++ YYS +G+   + A +    V + +  A SA
Sbjct:   19 RAILLGPPGAGKGTQAPKLAEKYCVCHLATGDMLRAMVASGSELGQRLKETMDAGKLVSDEMVVELIDNNLDTPACKNGFLLDGFPRTVKQAEMLDDLMEKRSEKLDSVIEFSVDDSLLVRRICGRLIHQPSGRSYHEEFHPPKEHMKDDVTGEPLIRRSDDNETTLRSRLESYHRQTSPLVQYYSARGLHTAIDASQSTDLVFASILAAFSA 231          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_PYRTR (Adenylate kinase 1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=adk1 PE=3 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 6.346e-63
Identity = 131/252 (51.98%), Postives = 165/252 (65.48%), Query Frame = 2
Query:  113 AKMASSSAANLE-DVPSVDL-MTELLRRMK-----CASKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIID-EAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQK 844
            A MA SS  +L+ DV  ++  + EL  R+       A+    R+IL+GPPG+GKGTQ+P IK+++C CHLATGDMLRA VAAKTPLG +AK+ MD G LVSD+++V +I  E      C +GFILDGFPRT  QA+KLD ML    K +   +   IDD +L  RITGR +HP+SGR+YH  F PPK P  DDVTGEPLIQR DD A  LK RL  +H QT PV+ YY K GI   + A + P +V   + K
Sbjct:    2 APMADSSVDDLKNDVKRLEQRIAELESRLAGHGGVAAATESVRMILMGPPGAGKGTQAPRIKEKFCACHLATGDMLRAQVAAKTPLGREAKKIMDAGGLVSDEIMVNMIKTELENNQECARGFILDGFPRTVTQAEKLDGMLAATKKPLQHAVELQIDDGLLVSRITGRLVHPASGRSYHKIFNPPKAPMTDDVTGEPLIQRSDDNAETLKKRLSTYHAQTAPVVAYYQKTGIWKPIDASQEPGQVWKSLLK 253          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_MAGGR (Adenylate kinase 1 OS=Magnaporthe grisea GN=ADK1 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.346e-63
Identity = 119/204 (58.33%), Postives = 148/204 (72.55%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMK-KPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEV 826
            R+IL+GPPG+GKGTQ+P IK+++  CHLATGDMLR+ VA KTPLG +AK+ MD+G LVSDD+V+G+I E +     C+ GFILDGFPRT  QAQ LD ML+ + +K+   +   IDDA+L  RITGR +HP+SGR+YHT F PPK    DDVTGEPLIQR DD A  LK RL  +H QT PV+DYY K GI   + A + P  V
Sbjct:   42 RMILIGPPGAGKGTQAPKIKEKFSCCHLATGDMLRSQVAKKTPLGREAKKIMDQGGLVSDDIVIGMIKEELDTNVECKGGFILDGFPRTVPQAQSLDAMLQARNQKLQHAVELQIDDALLVARITGRLVHPASGRSYHTTFNPPKKAMTDDVTGEPLIQRSDDNADALKKRLATYHSQTAPVVDYYRKTGIWKPIDASQEPGTV 245          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_CANGA (Adenylate kinase 1 OS=Candida glabrata GN=ADK1 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 6.346e-63
Identity = 117/218 (53.67%), Postives = 157/218 (72.02%), Query Frame = 2
Query:  200 ASKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            +S    R++L+GPPG+GKGTQ+P + + +   HLATGDMLR+ ++  T LG++AK+ MD+G LVSDD++V +I DE    P+C+ GFILDGFPRT  QA+KLD ML+++G  ++K +   IDD +L  RITGR IHP+SGR+YH  F PPK    DDVTGEPL+QR DD    LK RL A+H QTEP++D+Y K GI A + A +PP+ V S + KAL
Sbjct:    2 SSSDSIRMVLIGPPGAGKGTQAPNLVERFHAAHLATGDMLRSQISKGTELGLQAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDNMLKERGTPLEKAVELKIDDELLVARITGRLIHPASGRSYHKLFNPPKEDMKDDVTGEPLVQRSDDNEDALKKRLGAYHDQTEPIVDFYKKTGIWADVDASQPPETVWSAILKAL 219          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD1_PICGU (Adenylate kinase 1 OS=Pichia guilliermondii GN=ADK1 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 8.288e-63
Identity = 117/232 (50.43%), Postives = 161/232 (69.40%), Query Frame = 2
Query:  164 DLMTELLRRMKCASKPDK--RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGII-DEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            D +T+L ++        K  R++L+GPPG+GKGTQ+P +K+++C CHLATGDMLRA V AKT LG++AK+ MD+G LVSD+++V +I  E      C +GFILDGFPRT  QA+KLD MLE +   + K +   I+D +L +RITGR +HP+SGR+YH  F PPK    DD TGEPL+QR DD    LK RL  +HKQTEP+++YY K GI + + A + P +V +++ K L
Sbjct:   14 DRITQLEKKAGIVPNVPKSIRMVLIGPPGAGKGTQAPNLKEKFCACHLATGDMLRAQVTAKTELGVQAKKIMDQGGLVSDEIMVNMIKSELENNKECSQGFILDGFPRTIPQAEKLDSMLEDRKTPLQKAVELKIEDQLLVDRITGRLVHPASGRSYHKLFNPPKKEMTDDQTGEPLVQRSDDNEEALKKRLGTYHKQTEPIVEYYKKSGIWSGIDASQKPSKVWTDILKCL 245          
The following BLAST results are available for this feature:
BLAST of DY256927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD2_HUMAN2.181e-6353.30Adenylate kinase 2, mitochondrial OS=Homo sapiens ... [more]
KAD1_COPC72.181e-6358.33Adenylate kinase 1 OS=Coprinopsis cinerea (strain ... [more]
KAD2_XENTR2.849e-6353.77Adenylate kinase 2, mitochondrial OS=Xenopus tropi... [more]
KAD1_PICST2.849e-6354.25Adenylate kinase 1 OS=Pichia stipitis GN=ADK1 PE=3... [more]
KAD1_PENMA4.859e-6356.37Adenylate kinase 1 OS=Penicillium marneffei GN=adk... [more]
KAD2_DANRE6.346e-6352.58Adenylate kinase 2, mitochondrial OS=Danio rerio G... [more]
KAD1_PYRTR6.346e-6351.98Adenylate kinase 1 OS=Pyrenophora tritici-repentis... [more]
KAD1_MAGGR6.346e-6358.33Adenylate kinase 1 OS=Magnaporthe grisea GN=ADK1 P... [more]
KAD1_CANGA6.346e-6353.67Adenylate kinase 1 OS=Candida glabrata GN=ADK1 PE=... [more]
KAD1_PICGU8.288e-6350.43Adenylate kinase 1 OS=Pichia guilliermondii GN=ADK... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3AA01ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256927 ID=DY256927; Name=DY256927; organism=Citrus clementina; type=EST; length=1069bp
GACCCTTTTTCATTCAAACGCAAAAATCAAATCAAAATCAGACTCTCTCT
CTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCTAA
ACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAAGA
TGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTGCG
CCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAGGA
AAGGGTACTCAATCGCCCATCATTAAAGATGAATATTGCTTGTGTCACTT
GGCTACTGGTGATATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCTTG
GGATCAAGGCTAAGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATGAC
TTGGTTGTTGGTATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAGAA
AGGTTTCATTCTTGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAGAAGC
TGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGTTGATAAGGTTCTCAAC
TTTGCTATTGATGATGCGGTTTTGGAAGAGAGGATTACTGGTCGCTGGAT
CCACCCTTCGAGTGGCAGGACCTACCACACAAAATTTGCACCTCCCAAGG
TTCCTGGTGTTGACGATGTAACTGGAGAACCTTTGATTCAACGTAAAGAT
GACACTGCAGCTGTTCTCAAGTCAAGGCTGGAAGCTTTCCACAAGCAAAC
TGAACCGGTAATTGATTATTACTCCAAAAAGGGCATTGTTGCACAACTAC
ATGCTGAGAAGCCTCCTCAAGAAGTTACATCTGAGGTGCAGAAAGCACTT
TCGGCATGATGTGGGCTACAACTGAGGTTCATTATATGGTTCATTTAAAT
TTATCAGCAGATGAAACATCTGAGAACTTTTCTTATTCTTTTTTTTTGGC
TCACGTGTACTTGATATACTGTTGAACATGCTGATCCCTTTGATGTCCGG
TGCTATTTTTACTTCGGAAAATGGGCGCTGCCCTTTCCTGGAATTGATAA
AATAACTGAATAACCCTTC
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