DY256927

Overview
NameDY256927
Unique NameDY256927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1069
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_METEP (Adenylate kinase OS=Methylobacterium extorquens (strain PA1) GN=adk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.917e-41
Identity = 93/211 (44.08%), Postives = 132/211 (62.56%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            R+IL+GPPG+GKGTQS  I + Y +  L+TGDMLRAAVAA+TP+G++AK  M+ G LVSD +VVGI+ + +++   + GFILDGFPRT  QA+ LD ML ++G  +D V+ F +D+  L  RI  R    ++                    G+P+  RKDDT  V K+RL+A+ KQT P+ DYY+  G++ ++   KP   VT +V   L
Sbjct:    2 RIILLGPPGAGKGTQSERIVERYRVPQLSTGDMLRAAVAAETPVGLEAKAIMESGGLVSDAIVVGIVADRIEEADAKNGFILDGFPRTVEQAKALDAMLAQKGIALDAVVEFVVDETALVGRIAKRAEETAA-------------------RGQPV--RKDDTPEVFKTRLDAYRKQTAPLSDYYAGTGLLRKIDGMKPIDVVTGDVTALL 191          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_METC4 (Adenylate kinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=adk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.917e-41
Identity = 93/211 (44.08%), Postives = 132/211 (62.56%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            R+IL+GPPG+GKGTQS  I + Y +  L+TGDMLRAAVAA+TP+G++AK  M+ G LVSD +VVGI+ + +++   + GFILDGFPRT  QA+ LD ML ++G  +D V+ F +D+  L  RI  R    ++                    G+P+  RKDDT  V K+RL+A+ KQT P+ DYY+  G++ ++   KP   VT +V   L
Sbjct:    2 RIILLGPPGAGKGTQSERIVERYRVPQLSTGDMLRAAVAAETPVGLEAKAIMESGGLVSDAIVVGIVADRIEEADAKNGFILDGFPRTVEQAKALDAMLAQKGIALDAVVEFVVDETALVGRIAKRAEETAA-------------------RGQPV--RKDDTPEVFKTRLDAYRKQTAPLSDYYAGTGLLRKIDGMKPIDVVTGDVTALL 191          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_GEOUR (Adenylate kinase OS=Geobacter uraniireducens (strain Rf4) GN=adk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 8.917e-41
Identity = 86/194 (44.33%), Postives = 123/194 (63.40%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPG-VDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQL 799
            LIL+GPPG+GKGTQ+ ++   + +  ++TGD+LRAAV+  TP+G+KAK  M+ G LV D++VVGI+ E ++K  C  GFILDGFPRT  QA  L  ML      ++ V++ A+D   L +RITGR      G+ YH  F PP+V G  D+  GE L QR DD    ++ RL+ +  QT P+I YY  + ++  +
Sbjct:    3 LILLGPPGAGKGTQAKLLIKRFQIPQISTGDILRAAVSEMTPMGVKAKGYMESGALVPDEVVVGIVRERLEKNDCLNGFILDGFPRTVAQADALKHMLVCMNMSIEHVVSMAVDKEELLQRITGRRTCRLCGKGYHVVFDPPRVSGRCDECLGE-LFQRDDDQEETMRKRLDVYEDQTAPLITYYENESLLRSI 195          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_NEIPH (Adenylate kinase (Fragment) OS=Neisseria pharyngis GN=adk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.165e-40
Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  299 LATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 778
            ++TGDMLRAA+ A TPLG++AK+ +D+G LV DD+++G++ E + +  C+ GF+ DGFPRT  QA+ + E     G  +D V+   + D+V+ +R++GR +H +SGRTYH  + PPKV G DDVTGE LIQR DD    +K RL  +H+QTE ++D+YSK
Sbjct:   11 ISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEA----GVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVDFYSK 166          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_NEILA (Adenylate kinase (Fragment) OS=Neisseria lactamica GN=adk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.165e-40
Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  299 LATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 778
            ++TGDMLRAA+ A TPLG++AK+ +D+G LV DD+++G++ E + +  C+ GF+ DGFPRT  QA+ + E     G  +D V+   + D+V+ +R++GR +H +SGRTYH  + PPKV G DDVTGE LIQR DD    +K RL  +H+QTE ++D+YSK
Sbjct:   11 ISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEA----GVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVDFYSK 166          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_NEIFL (Adenylate kinase (Fragment) OS=Neisseria flavescens GN=adk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.165e-40
Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  299 LATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 778
            ++TGDMLRAA+ A TPLG++AK+ +D+G LV DD+++G++ E + +  C+ GF+ DGFPRT  QA+ + E     G  +D V+   + D+V+ +R++GR +H +SGRTYH  + PPKV G DDVTGE LIQR DD    +K RL  +H+QTE ++D+YSK
Sbjct:   11 ISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAIVEA----GVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVDFYSK 166          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_NEICI (Adenylate kinase (Fragment) OS=Neisseria cinerea GN=adk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.165e-40
Identity = 78/160 (48.75%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  299 LATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 778
            ++TGDMLRAA+ A TPLG++AK+ +D+G LV DD+++G++ E + +  C+ GF+ DGFPRT  QA+ + E     G  +D V+   + D+V+ +R++GR +H +SGRTYH  + PPKV G DDVTGE LIQR DD    +K RL  +H+QTE ++D+YSK
Sbjct:   11 ISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEA----GVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLAVYHEQTEVLVDFYSK 166          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_AZOC5 (Adenylate kinase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=adk PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.165e-40
Identity = 92/211 (43.60%), Postives = 128/211 (60.66%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            RL+L+GPPG+GKGTQ+  +   + +  L+TGDMLRAAVAA TP+G+KAK  M+ G LVSD++V+GII E + +P  +KGFILDGFPRT  QA  LD++L  +G K+D V+   +D A L +RI  R     +                    GEP+  RKDD   V K+RLEA+++ T  V  YYS +G + Q+    P ++VT  +   L
Sbjct:    2 RLVLLGPPGAGKGTQALRLVQRHGIVQLSTGDMLRAAVAAGTPVGLKAKAVMESGGLVSDEIVIGIIAERLDQPDARKGFILDGFPRTVAQADALDKLLADKGLKLDAVIELKVDQAKLLDRILNRAAEAKA-------------------KGEPV--RKDDDPEVFKTRLEAYNRDTAVVAPYYSARGQLQQIDGMAPIEKVTQAIDSIL 191          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_TREDE (Adenylate kinase OS=Treponema denticola GN=adk PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.521e-40
Identity = 81/201 (40.30%), Postives = 126/201 (62.69%), Query Frame = 2
Query:  224 ILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEV 826
            I +GPPG+GKGT +  +   Y + H++TGD+ RAA+  +T LG K K  +D G LVSDDL + ++ E +++   +KGFILDGFPRT  QA  L++++     K+D V+NF I D  + +R++GR +  S G+++H +F  PK  G+ D     L+ R DD    ++ RLE +  QT P+IDYY+KK ++  + A    ++V
Sbjct:    4 IFLGPPGAGKGTLAFEVSKSYKIPHISTGDLFRAAIKEQTDLGKKVKAVIDSGALVSDDLTIALVKERLERDDTKKGFILDGFPRTIAQADALEDIV-----KIDSVINFDISDDEVIKRLSGRRVCSSCGQSFHIEFVKPKKEGICDSCSGDLMIRPDDKIEAIQKRLETYRNQTAPLIDYYTKKDLIVNIDARPASEKV 199          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRPZ (Adenylate kinase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=adk PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.521e-40
Identity = 87/211 (41.23%), Postives = 134/211 (63.51%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            L+++G PG+GKGTQ+  I +E+ + H++TGDM RAA+A +T +G  AK  +DKGELV D++  GI+ E + +    +KGF+LDG+PRT  QA  LD  LE+ G ++D V+N  +D + L ER++GR I+  +G T+H  F PP      D   E   QR+DD    +K RL+    Q EP++++Y K G+V  +   +   +V ++V+KAL
Sbjct:    3 LLIIGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLVERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLGLVTDIEGNQEITDVFADVEKAL 208          
The following BLAST results are available for this feature:
BLAST of DY256927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_METEP8.917e-4144.08Adenylate kinase OS=Methylobacterium extorquens (s... [more]
KAD_METC48.917e-4144.08Adenylate kinase OS=Methylobacterium chloromethani... [more]
KAD_GEOUR8.917e-4144.33Adenylate kinase OS=Geobacter uraniireducens (stra... [more]
KAD_NEIPH1.165e-4048.75Adenylate kinase (Fragment) OS=Neisseria pharyngis... [more]
KAD_NEILA1.165e-4048.75Adenylate kinase (Fragment) OS=Neisseria lactamica... [more]
KAD_NEIFL1.165e-4048.75Adenylate kinase (Fragment) OS=Neisseria flavescen... [more]
KAD_NEICI1.165e-4048.75Adenylate kinase (Fragment) OS=Neisseria cinerea G... [more]
KAD_AZOC51.165e-4043.60Adenylate kinase OS=Azorhizobium caulinodans (stra... [more]
KAD_TREDE1.521e-4040.30Adenylate kinase OS=Treponema denticola GN=adk PE=... [more]
KAD_STRPZ1.521e-4041.23Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3AA01ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256927 ID=DY256927; Name=DY256927; organism=Citrus clementina; type=EST; length=1069bp
GACCCTTTTTCATTCAAACGCAAAAATCAAATCAAAATCAGACTCTCTCT
CTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCTAA
ACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAAGA
TGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTGCG
CCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAGGA
AAGGGTACTCAATCGCCCATCATTAAAGATGAATATTGCTTGTGTCACTT
GGCTACTGGTGATATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCTTG
GGATCAAGGCTAAGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATGAC
TTGGTTGTTGGTATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAGAA
AGGTTTCATTCTTGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAGAAGC
TGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGTTGATAAGGTTCTCAAC
TTTGCTATTGATGATGCGGTTTTGGAAGAGAGGATTACTGGTCGCTGGAT
CCACCCTTCGAGTGGCAGGACCTACCACACAAAATTTGCACCTCCCAAGG
TTCCTGGTGTTGACGATGTAACTGGAGAACCTTTGATTCAACGTAAAGAT
GACACTGCAGCTGTTCTCAAGTCAAGGCTGGAAGCTTTCCACAAGCAAAC
TGAACCGGTAATTGATTATTACTCCAAAAAGGGCATTGTTGCACAACTAC
ATGCTGAGAAGCCTCCTCAAGAAGTTACATCTGAGGTGCAGAAAGCACTT
TCGGCATGATGTGGGCTACAACTGAGGTTCATTATATGGTTCATTTAAAT
TTATCAGCAGATGAAACATCTGAGAACTTTTCTTATTCTTTTTTTTTGGC
TCACGTGTACTTGATATACTGTTGAACATGCTGATCCCTTTGATGTCCGG
TGCTATTTTTACTTCGGAAAATGGGCGCTGCCCTTTCCTGGAATTGATAA
AATAACTGAATAACCCTTC
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