DY256927

Overview
NameDY256927
Unique NameDY256927
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1069
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY256927_ssr43 microsatellite DY256927_ssr43:43..68. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_ERYLH (Adenylate kinase OS=Erythrobacter litoralis (strain HTCC2594) GN=adk PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.780e-40
Identity = 85/211 (40.28%), Postives = 130/211 (61.61%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRK-DDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            +IL+GPPG+GKGTQS  + + + +  L+TGDMLRAAV A+TP+G+KAK  MD+GELVSDD+V  +ID  +       G I DG+PRT  QA +LD +L K  + +DKV+   +++  L +RITGR+     G  YH +   P   GV DV G    +R+ DD    +++R++ +  +T P++  Y ++G+V ++       EVT+ +   L
Sbjct:    3 IILLGPPGAGKGTQSQRLVERHGMRQLSTGDMLRAAVKAQTPVGLKAKAVMDRGELVSDDIVSELIDAELTAMHGNVGAIFDGYPRTAAQAGQLDVILAKHDRSLDKVIELEVNEEALVDRITGRFTCAKCGTGYHDRHKQPAREGVCDVCGSTEFKRRPDDNEETVRTRMQEYRAKTAPILPIYEERGLVERVDGMGGIDEVTAAIDALL 213          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.859e-40
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKALS 853
            L+++G PG+GKGTQ+  I +++ L H++TGDM RAA+A +T +G  AK  +DKGELV D++  GI+ E + +    +KGF+LDG+PRT  QA  LDE+L K   K+D V+N  +D A L ER++GR I+  +G TYH  F PP      D   +   QR+DD    +K RL+    Q  P+I+YY  KG+V  +   +    V   + K L+
Sbjct:    3 LLIMGLPGAGKGTQAAKIVEKFGLAHISTGDMFRAAMANQTEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPA-----DYNEDDYYQREDDKPETVKRRLDVNIAQGHPIIEYYRNKGLVYDIEGNQDINLVFETIAKVLA 209          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_NEIAN (Adenylate kinase (Fragment) OS=Neisseria animalis GN=adk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.859e-40
Identity = 77/160 (48.12%), Postives = 113/160 (70.62%), Query Frame = 2
Query:  299 LATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSK 778
            ++TGDMLRAA+ A TPLG++AK+ +D+G LV DD+++G++ E + +  C+ GF+ DGFPRT  QA+ + E     G  +D V+   + D+V+ +R++GR +H +SGRTYH  + PPKV G DDVTGE LIQR DD    +K RL+ +H QTE ++ +YSK
Sbjct:   11 ISTGDMLRAAIKAGTPLGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEA----GVDLDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHIAYNPPKVEGKDDVTGEDLIQRDDDKEETVKKRLDVYHGQTEVLVGFYSK 166          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_METPB (Adenylate kinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=adk PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 9.859e-40
Identity = 91/207 (43.96%), Postives = 130/207 (62.80%), Query Frame = 2
Query:  218 RLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEV 838
            R+IL+GPPG+GKGTQS  I + Y +  L+TGDMLRAAVAA TP+G++AK  M+ G LV D +VVGI+ + +++   + GFILDGFPRT  QA+ LD ML ++G  +D V+ F +D+  L  RI  R    ++                    G+P+  RKDDT  V K+RL+A+ +QT P+ DYY+  G++ ++   KP  EVT +V
Sbjct:    2 RIILLGPPGAGKGTQSERIVERYRVPQLSTGDMLRAAVAAGTPVGLEAKSIMESGGLVPDAVVVGIVADRIEEADARDGFILDGFPRTVEQAKALDAMLAEKGIALDAVVEFVVDENALVGRIAKRAEETAA-------------------RGQPV--RKDDTPEVFKTRLDAYKRQTAPLSDYYAGTGLLRKIDGMKPIDEVTGDV 187          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.288e-39
Identity = 82/206 (39.81%), Postives = 127/206 (61.65%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEV 838
            ++ +GPPG+GKGT +  +K+   + H++TGDM R  ++AK+ LG K ++ + +GELV DDL   I+ E + KP C+KGFILDG+PRT  QA+ LDE+L+K G+++   + F + + V+ +RI+ R I  + G+ Y+    PPK+ G  DV G  L QR+DD   V++ R + +   T PVI+YY K   +  +        V  EV
Sbjct:    3 IVFLGPPGAGKGTYAKELKEILGIPHISTGDMFREEISAKSELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCKKGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKRISNRRICKNCGKIYNLITLPPKINGKCDVCGGELYQREDDREEVVRRRYKVYMDNTYPVIEYYRKSNKLFTVDGSMDVDSVIKEV 208          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_THEAB (Adenylate kinase OS=Thermosipho africanus (strain TCF52B) GN=adk PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.288e-39
Identity = 83/206 (40.29%), Postives = 125/206 (60.68%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEV 838
            ++ +GPPG+GKGT +  + +   + H++TGDM R AVA+K+ LG K +E + +G+LV DDL   I+ + + K  C+ GFILDGFPRT  QA+ LDE++   GK +D V+ F +D+  + +RI+ R I  + G+ Y+    PPKV G  DV G  L QR+DD   V++ R   + + T PVI+YY K   +  ++       V  EV
Sbjct:    3 MVFLGPPGAGKGTYAKRLIEMLNIPHISTGDMFREAVASKSELGKKVEEILKRGDLVPDDLTNSIVKDRLSKEDCKNGFILDGFPRTVAQAKALDEIMRSLGKDLDYVIYFEVDEEEVVKRISNRRICSNCGKIYNLITLPPKVDGKCDVCGGTLYQREDDKEEVVRKRYRVYMENTYPVIEYYQKSNKLFTVNGALDVDSVIKEV 208          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRP6 (Adenylate kinase OS=Streptococcus pyogenes serotype M6 GN=adk PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.288e-39
Identity = 86/211 (40.76%), Postives = 133/211 (63.03%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            L+++G PG+GKGTQ+  I +E+ + H++TGDM RAA+A +T +G  AK  +DKGELV D++  GI+ E + +    +KGF+LDG+PRT  QA  LD  LE+ G ++D V+N  +D + L ER++GR I+  +G T+H  F PP      D   E   QR+DD    +K RL+    Q EP++++Y K  +V  +   +   +V ++V+KAL
Sbjct:    3 LLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLVERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNMAQEEPILEHYRKLDLVTDIEGNQEITDVFADVEKAL 208          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRE4 (Adenylate kinase OS=Streptococcus equi subsp. equi (strain 4047) GN=adk PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.288e-39
Identity = 87/211 (41.23%), Postives = 132/211 (62.56%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPSC-QKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            L+++G PG+GKGTQ+  I + + L H++TGDM RAA+A +T +G+ AK  +DKG+LV D++  GI+ E + +    +KGF+LDG+PRT  QA  LDE L+  G  +D V+N  +D A L +R++GR I+  +G T+H  F PP    V D   E   QR+DD    +K RL+    Q EP+I +Y + GIV  +   K   EV ++++K +
Sbjct:    3 LLIMGLPGAGKGTQAAKIVETFELIHISTGDMFRAAMANQTEMGVLAKSYIDKGDLVPDEVTNGIVKERLAQADIKEKGFLLDGYPRTIEQAHALDETLKALGLTLDGVINIEVDPASLIDRLSGRIINKKTGETFHKIFNPP----VGDYKEEDFYQREDDKPETVKRRLDVNIAQGEPIIKHYRQAGIVRDIDGNKDISEVFADIKKVI 209          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRPG (Adenylate kinase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=adk PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.682e-39
Identity = 86/211 (40.76%), Postives = 133/211 (63.03%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            L+++G PG+GKGTQ+  I +E+ + H++TGDM RAA+A +T +G  AK  +DKGELV D++  GI+ E + +    +KGF+LDG+PRT  QA  LD  LE+ G ++D V+N  +D + L ER++GR I+  +G T+H  F PP      D   E   QR+DD    +K RL+    Q EP++++Y K  +V  +   +   +V ++V+KAL
Sbjct:    3 LLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLVERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNMAQGEPILEHYRKLDLVTDIEGNQEITDVFADVEKAL 208          
BLAST of DY256927 vs. ExPASy Swiss-Prot
Match: KAD_STRA1 (Adenylate kinase OS=Streptococcus agalactiae serotype Ia GN=adk PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.682e-39
Identity = 87/211 (41.23%), Postives = 133/211 (63.03%), Query Frame = 2
Query:  221 LILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGELVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKGIVAQLHAEKPPQEVTSEVQKAL 850
            L+++G PG+GKGTQ+  I +E+ + H++TGDM RAA+A +T +G  AK  +DKGELV D++  GI+ E + +    +KGF+LDG+PRT  QA  LD  LE+ G ++D V+N  +D + L ER++GR I+  +G T+H  F PP      D   E   QR+DD    +K RL+    Q E ++++Y K G+V  +   +   EV ++V+KAL
Sbjct:    3 LLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNIAQGESILEHYRKLGLVTDIEGNQEITEVFADVEKAL 208          
The following BLAST results are available for this feature:
BLAST of DY256927 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_ERYLH5.780e-4040.28Adenylate kinase OS=Erythrobacter litoralis (strai... [more]
KAD_STRMU9.859e-4041.51Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]
KAD_NEIAN9.859e-4048.13Adenylate kinase (Fragment) OS=Neisseria animalis ... [more]
KAD_METPB9.859e-4043.96Adenylate kinase OS=Methylobacterium populi (strai... [more]
KAD_THEM41.288e-3939.81Adenylate kinase OS=Thermosipho melanesiensis (str... [more]
KAD_THEAB1.288e-3940.29Adenylate kinase OS=Thermosipho africanus (strain ... [more]
KAD_STRP61.288e-3940.76Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRE41.288e-3941.23Adenylate kinase OS=Streptococcus equi subsp. equi... [more]
KAD_STRPG1.682e-3940.76Adenylate kinase OS=Streptococcus pyogenes serotyp... [more]
KAD_STRA11.682e-3941.23Adenylate kinase OS=Streptococcus agalactiae serot... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3AA01ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY256927 ID=DY256927; Name=DY256927; organism=Citrus clementina; type=EST; length=1069bp
GACCCTTTTTCATTCAAACGCAAAAATCAAATCAAAATCAGACTCTCTCT
CTCTCTCTCTCTCTCTCTAATATCCGTCCAAAGAGGGAGGAAAACCCTAA
ACGGCACCGTTTGCAAAAATGGCGAGCAGTTCAGCGGCGAACCTGGAAGA
TGTGCCGTCGGTGGATCTCATGACTGAGCTCCTCCGTCGCATGAAGTGCG
CCTCCAAGCCAGACAAGCGCCTCATTCTCGTTGGCCCACCCGGATCAGGA
AAGGGTACTCAATCGCCCATCATTAAAGATGAATATTGCTTGTGTCACTT
GGCTACTGGTGATATGTTGAGAGCCGCTGTTGCTGCTAAAACTCCTCTTG
GGATCAAGGCTAAGGAGGCTATGGACAAGGGAGAACTTGTTTCTGATGAC
TTGGTTGTTGGTATCATAGATGAAGCAATGAAGAAACCTTCTTGTCAGAA
AGGTTTCATTCTTGACGGGTTTCCCAGAACTGAGGTCCAAGCTCAGAAGC
TGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGTTGATAAGGTTCTCAAC
TTTGCTATTGATGATGCGGTTTTGGAAGAGAGGATTACTGGTCGCTGGAT
CCACCCTTCGAGTGGCAGGACCTACCACACAAAATTTGCACCTCCCAAGG
TTCCTGGTGTTGACGATGTAACTGGAGAACCTTTGATTCAACGTAAAGAT
GACACTGCAGCTGTTCTCAAGTCAAGGCTGGAAGCTTTCCACAAGCAAAC
TGAACCGGTAATTGATTATTACTCCAAAAAGGGCATTGTTGCACAACTAC
ATGCTGAGAAGCCTCCTCAAGAAGTTACATCTGAGGTGCAGAAAGCACTT
TCGGCATGATGTGGGCTACAACTGAGGTTCATTATATGGTTCATTTAAAT
TTATCAGCAGATGAAACATCTGAGAACTTTTCTTATTCTTTTTTTTTGGC
TCACGTGTACTTGATATACTGTTGAACATGCTGATCCCTTTGATGTCCGG
TGCTATTTTTACTTCGGAAAATGGGCGCTGCCCTTTCCTGGAATTGATAA
AATAACTGAATAACCCTTC
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