DY256934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: IMP4_CANGA (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Candida glabrata GN=IMP4 PE=3 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.046e-65 Identity = 128/272 (47.06%), Postives = 182/272 (66.91%), Query Frame = 1 Query: 61 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQ------EIDLEDENTAIPRSHIDDEY-ANATERDPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFPV-PKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIKV 852 MLRR R RREYLYRK+ E +E L +K++ IK+AL +GKP+P EL +E + D EDE + +DDEY A++ + ++++TTSRDPS+ L QF KE+K +FPNA R+NRG V+++++ C+ TD++++HEHRGVP L + H P+GPTA+F L NVV RHDI +R G E PHLI DNF + LG R ILK+LFP PK D+ R+ITFAN+ D+IS R H+Y + +E+ E+GPRFE+RL+++++ Sbjct: 1 MLRRQARERREYLYRKAQELQETQLQQKRQIIKQALAQGKPLPKELAEDEQLQKDFRYDQSMADNEDE------AGVDDEYSASSGIVEARVIVTTSRDPSSRLAQFAKEIKLLFPNAVRLNRGNYVMADLVSACKKSGTTDLIVLHEHRGVPTSLTVSHFPYGPTAFFSLHNVVLRHDILNR---GNQSEVNPHLIFDNFTTPLGNRVVTILKNLFPPGPKKDSSRVITFANRGDFISVRQHVYVRT--KDGVEMAEVGPRFEMRLFELRL 261 HSP 2 Score: 23.8682 bits (50), Expect = 1.046e-65 Identity = 10/30 (33.33%), Postives = 18/30 (60.00%), Query Frame = 2 Query: 845 LKLGTGDQSEAQIEWVIRLNLTQAESENSL 934 L+LGT + +A +EW +R + A ++ L Sbjct: 259 LRLGTLENKDADVEWQLRRFVRTANRKDYL 288
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: IMP4_ASHGO (U3 small nucleolar ribonucleoprotein protein IMP4 OS=Ashbya gossypii GN=IMP4 PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.243e-63 Identity = 127/264 (48.11%), Postives = 176/264 (66.67%), Query Frame = 1 Query: 61 MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATER-DPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFPV-PKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQI 846 MLRR R RREYLYRK+ E +E L +K+ IK+AL +GKP+P E+ ++ R D + + +A + IDDEY+ + DPK+++TTSRDPS L+QF KE+K +FP + R+NRG ++ +++ C+ TD+V++HEHRGVP L I H P GPTA F L NVV RHDI + G E +PHLI DNF + LG+R ILKH+FP K D+ R+ITFAN+ D+IS R H+Y K +EL E+GPRFE++LY++ Sbjct: 1 MLRRQARERREYLYRKAQELQESQLQQKRDLIKQALAQGKPLPKEVADDTKLQR---DYQYDESA--QESIDDEYSALSGIVDPKVIVTTSRDPSTRLSQFAKEVKLLFPTSVRLNRGNYIMKNLVDACQKSGTTDLVVLHEHRGVPTALTISHFPHGPTASFSLHNVVLRHDI---LNAGNQSEVHPHLIFDNFTTPLGQRVVKILKHMFPPGVKRDSPRVITFANRGDFISVRQHVYVKT--RDGVELAEVGPRFEMKLYEL 254 HSP 2 Score: 22.7126 bits (47), Expect = 1.243e-63 Identity = 10/30 (33.33%), Postives = 17/30 (56.67%), Query Frame = 2 Query: 845 LKLGTGDQSEAQIEWVIRLNLTQAESENSL 934 L LGT + +A +EW +R + A ++ L Sbjct: 254 LTLGTLENKDADVEWQLRRFVRTANRKDYL 283
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_XENLA (Ribosome production factor 1 OS=Xenopus laevis GN=bxdc5 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.402e-36 Identity = 93/264 (35.23%), Postives = 152/264 (57.58%), Query Frame = 1 Query: 85 RREYLY--RKSLEGKERLLYEKKRKI-KEALQEG---KPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 RR++++ K + KE+L+ KKRK +EAL + KP+P + N+ +D DE A+ + DE+A + PKIL+TTS P +F ++L + PN+ R G + +II C + ++TD+++++E R VP+GL++CHLP GPTA+F + NV R ++K + T E P +IL+NF ++LG + L+P P +++ TF NQ DYI FR+H Y + K + ++E+GPRF L+L ++ Sbjct: 56 RRQFMFIKLKQEKRKEKLILRKKRKKEREALGDKAPPKPVPKTIENQRVYDETTVDPADEEVALDEA--TDEFAPYFNKQTTPKILITTSDRPRGRSVRFTEQLSSIIPNSDVYYRRGLALKKIIPQCVSRDYTDLLVINEDRKVPNGLVLCHLPDGPTAHFKISNVRLRKEMKRKGKEPT--EHKPEVILNNFTTRLGHSIGRMFASLYPHDPHFVGRQVATFHNQRDYIFFRYHRYLFK-SEKKVGIQELGPRFTLKLRSLQ 314
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: YUY1_CAEEL (Brix domain-containing protein F44G4.1 OS=Caenorhabditis elegans GN=F44G4.1 PE=2 SV=4) HSP 1 Score: 147.517 bits (371), Expect = 1.585e-34 Identity = 85/249 (34.14%), Postives = 135/249 (54.22%), Query Frame = 1 Query: 103 RKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDL-EDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRL 837 +++L +R ++ +I++ L E P + E+ + + +E+ + +DE+A R+ PK+++T + +F EL+ PN++ R ++ IIE + EFTD+++VHE R P+G+I CHLP GPTAYF + ++ D+ K G +P +IL+NF ++LG A +L LFP PK +R++TF NQ DYI FRHH YE + L E+GPRF LRL Sbjct: 106 KRALRKDKRARQGERAQIRDELGESAPQKEVPKTIESMREYDATMVNEEDDEVEHDEANDEFAPYFNRETSPKVMITMTPKAKITTFKFCFELQKCIPNSEIFTRKNVLLKTIIEQAKEREFTDLLVVHEDRKKPNGIIFCHLPEGPTAYFKINSLTFTQDL---KKFGESTSHFPEVILNNFNTRLGHNIARMLACLFPHDPKFTGRRVVTFHNQRDYIFFRHHRYEFKKEGSKAALLELGPRFTLRL 351
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_PONAB (Ribosome production factor 1 OS=Pongo abelii GN=BXDC5 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.610e-34 Identity = 93/255 (36.47%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 106 KSLEGKERLLYEKK-RKIKEALQEG---KPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 K + KE+L +KK +K +EAL + KP+P + N+ +D DE A + DE+A+ + PKIL+TTS P + ++L V PN+ R G + +II C A +FTD+++++E R P+GLI+ HLP GPTA+F + +V R +IK R T E P +IL+NF ++LG + LFP P+ +++ TF NQ DYI FR H Y + K + ++E+GPRF L+L ++ Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEA--TDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPT--EHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFR-SEKKVGIQELGPRFTLKLRSLQ 320
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_HUMAN (Ribosome production factor 1 OS=Homo sapiens GN=BXDC5 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 4.610e-34 Identity = 93/255 (36.47%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 106 KSLEGKERLLYEKK-RKIKEALQEG---KPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 K + KE+L +KK +K +EAL + KP+P + N+ +D DE A + DE+A+ + PKIL+TTS P + ++L V PN+ R G + +II C A +FTD+++++E R P+GLI+ HLP GPTA+F + +V R +IK R T E P +IL+NF ++LG + LFP P+ +++ TF NQ DYI FR H Y + K + ++E+GPRF L+L ++ Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEA--TDEFASYFNKQTSPKILITTSDRPHGRTVRLCEQLSTVIPNSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPT--EHIPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFR-SEKKVGIQELGPRFTLKLRSLQ 320
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_MOUSE (Ribosome production factor 1 OS=Mus musculus GN=Bxdc5 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 7.864e-34 Identity = 93/255 (36.47%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 106 KSLEGKERLLYEKK-RKIKEALQEG---KPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 K + KE+L +KK +K +EAL + KP+P + N+ +D DE A + DE+A+ R PKIL+TTS P + ++L V P++ R G + +II C A +FTD+++++E R P+GLI+ HLP GPTA+F + +V R +IK R T E P +IL+NF ++LG + LFP P+ +++ TF NQ DYI FR H Y + K + ++E+GPRF L+L ++ Sbjct: 71 KQQQRKEKLAAKKKLKKEREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEA--TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPT--EHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFK-SEKKVGIQELGPRFTLKLRSLQ 320
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_RAT (Ribosome production factor 1 OS=Rattus norvegicus GN=Bxdc5 PE=2 SV=2) HSP 1 Score: 144.05 bits (362), Expect = 1.752e-33 Identity = 92/255 (36.08%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 106 KSLEGKERLLYEKK-RKIKEALQEG---KPIPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATERD--PKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 K + KE+L +KK ++ +EAL + KP+P + N+ +D DE A + DE+A+ R PKIL+TTS P + ++L V P++ R G + +II C A +FTD+++++E R P+GLI+ HLP GPTA+F + +V R +IK R T E P +IL+NF ++LG + LFP P+ +++ TF NQ DYI FR H Y + K + ++E+GPRF L+L ++ Sbjct: 71 KQQQRKEKLAAKKKLKREREALGDKAPPKPVPKTIDNQRVYDETTVDPNDEEVAYDEA--TDEFASYFNRQTSPKILITTSDRPHGRTVRLCEQLSTVIPDSHVYYRRGLALKKIIPQCIARDFTDLIVINEDRKTPNGLILSHLPNGPTAHFKMSSVRLRKEIKRRGKDPT--EHVPEIILNNFTTRLGHSIGRMFASLFPHNPQFIGRQVATFHNQRDYIFFRFHRYIFK-SEKKVGIQELGPRFTLKLRSLQ 320
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_DROME (Probable ribosome production factor 1 OS=Drosophila melanogaster GN=CG6712 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.937e-32 Identity = 93/260 (35.77%), Postives = 144/260 (55.38%), Query Frame = 1 Query: 85 RREYLYRKSLEGKERLLYEKKRKIKEALQEGKPIPTELRNEEAALRQEIDLED-ENTAIPRSHIDDEYANATER--DPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIK-DRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLF-PVPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 +R LY+K + K + +++R ++A P T E + +L D +N + + D++++ ER +PK+L+T + +P +F EL +FPNA R + +I ++ EFTDVV+V+E R P+GL++ HLP GPTA+F L NV DIK D K I + P +IL+NF ++LG +L LF P+ +R +TF NQ DYI FRHH YE K ++L+E+GPRF L+L ++ Sbjct: 108 QRLALYKKMKKEKHKKKMQERRARRKAGVPANPGHTIESLREKDQTEVANLNDSDNEELQKELQLDDFSSYFERSYEPKVLITFADNPVTKTRKFGLELSRIFPNALVKIRNKSSVKKICKSAEREEFTDVVIVNEDRRKPNGLLVIHLPNGPTAHFKLSNVKLTSDIKRDHKEI---TKHRPEVILNNFTTRLGLTVGRMLGALFHHDPEFRGRRAVTFHNQRDYIFFRHHRYEFTKEGKRVKLRELGPRFTLKLRSLQ 364
BLAST of DY256934 vs. ExPASy Swiss-Prot
Match: RPF1_DANRE (Ribosome production factor 1 OS=Danio rerio GN=bxdc5 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.255e-31 Identity = 89/273 (32.60%), Postives = 150/273 (54.95%), Query Frame = 1 Query: 52 SATMLRRNIRLRREYLYRKSLEGKERL-LYEKKRKIKEALQEGKP---IPTELRNEEAALRQEIDLEDENTAIPRSHIDDEYANATER--DPKILLTTSRDPSAPLTQFVKELKFVFPNAQRMNRGGQVISEIIETCRAHEFTDVVLVHEHRGVPDGLIICHLPFGPTAYFGLLNVVTRHDIKDRKSIGTMPEAYPHLILDNFKSKLGERTANILKHLFP-VPKADTKRIITFANQSDYISFRHHIYEKQGGPKSLELKEIGPRFELRLYQIK 849 S + ++ R +L K + K+R+ L +KK+K ++AL + P +P + N+ ++ EDE A DE++ R +PK+L+TTS P +F +L V P+A R G + ++I C + FT +++++E R VP+G+++CHLP GPTA+F + +V R ++K R T E P +IL+NF ++LG + LFP P+ +++ TF NQ D+I FR H Y + K + ++E+GPRF L+L ++ Sbjct: 34 SVSEIKNKQRRHTMFLKLKEEKRKKRMELKKKKKKERKALDDKAPPKEVPKTIENQRIYDETTVNPEDEEVAFDEG--TDEFSAYFNRLTNPKVLITTSDRPRGRTVRFCDQLATVIPHAYVYYRRGLALKKVIPQCISRGFTYLMVINEDRKVPNGMVLCHLPDGPTAHFKVSSVRLRKEMKRRGKNPT--EHSPEVILNNFTTRLGHSIGRLFAALFPHDPQFVGRQVATFHNQRDFIFFRFHRYIFK-NEKKVGIQELGPRFTLKLRSLQ 301 The following BLAST results are available for this feature:
BLAST of DY256934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY256934 ID=DY256934; Name=DY256934; organism=Citrus clementina; type=EST; length=1277bpback to top |