DY256946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_ECOL6 (Fumarate hydratase class II OS=Escherichia coli O6 GN=fumC PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.281e-33 Identity = 70/113 (61.95%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GG++G+FELNVF+PM+ L S+RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK AAL LG L+ EFD V PE+M+G Sbjct: 349 MGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDRWVRPEQMVG 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_RICFE (Fumarate hydratase class II OS=Rickettsia felis GN=fumC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.591e-33 Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 + GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N RI+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEFD +VVPEKMIG Sbjct: 349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFDKIVVPEKMIG 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_PHOLL (Fumarate hydratase class II OS=Photorhabdus luminescens subsp. laumondii GN=fumC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.537e-33 Identity = 67/113 (59.29%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GG++G+FELNVF+PM+ + L S+RLL D SF ++C GI+ NR+RI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+KLG L EFD V PE M+G Sbjct: 349 IGGASGNFELNVFRPMVINNFLQSVRLLADGMRSFNEHCAVGIEPNRDRITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKQSAMKLGYLTEAEFDEWVRPEDMVG 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_HELPY (Fumarate hydratase class II OS=Helicobacter pylori GN=fumC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 9.537e-33 Identity = 67/114 (58.77%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + S G+FELNVFKP+I L SLRLL D+ SF +C GI+ NRE+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 348 IAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNREKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDKFVVPEKMIGP 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_HELPJ (Fumarate hydratase class II OS=Helicobacter pylori J99 GN=fumC PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.125e-32 Identity = 66/114 (57.89%), Postives = 87/114 (76.32%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGP 344 + S G+FELNVFKP+I L SLRLL D+ SF +C GI+ N+E+I LH SLMLVT+LNP +GY+NAA +AK AHK+G +LK++AL+L +L++E+FD VVPEKMIGP Sbjct: 348 IAASQGNFELNVFKPVIIYNFLQSLRLLSDSMESFNIHCASGIEPNKEKIDYYLHHSLMLVTALNPHVGYENAAKIAKNAHKKGISLKESALELKLLSAEDFDQFVVPEKMIGP 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_SALTY (Fumarate hydratase class II OS=Salmonella typhimurium GN=fumC PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.733e-32 Identity = 67/113 (59.29%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GG++G+FELNV++PM+ L ++RLL D SF K+C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+ LG L+ EEFD V PE M+G Sbjct: 349 MGGASGNFELNVYRPMVIHNFLQTVRLLADGMESFNKHCASGIEPNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDEEFDAWVRPELMVG 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_RICBR (Fumarate hydratase class II OS=Rickettsia bellii (strain RML369-C) GN=fumC PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.377e-31 Identity = 68/115 (59.13%), Postives = 86/115 (74.78%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIGPS 347 + GSNGH ELNVFKP+I +L S+ LL DA+ SF +CV GI+ N I+ L +SLMLVT+LNP IGYDNAA +AK+AHK G TLK+AA KL +L+ EEF+ +VVPEKM+ S Sbjct: 349 IAGSNGHLELNVFKPVIIYNILQSIELLSDAANSFVTHCVDGIEPNITHINDLRDKSLMLVTALNPHIGYDNAAKIAKEAHKHGITLKEAAKKLNLLSEEEFNKIVVPEKMVRQS 463
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_SALTI (Fumarate hydratase class II OS=Salmonella typhi GN=fumC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.799e-31 Identity = 66/113 (58.41%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMIG 341 +GG++G+FELNV++PM+ L ++RLL D ASF ++C GI+ NRERI++LL+ESLMLVT+LN IGYD AA +AKKAHKEG TLK +A+ LG L+ EFD V PE M+G Sbjct: 349 MGGASGNFELNVYRPMVIHNFLQTVRLLADGMASFNQHCASGIEPNRERITQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKASAVALGYLSDAEFDAWVRPELMVG 461
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_RICPR (Fumarate hydratase class II OS=Rickettsia prowazekii GN=fumC PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.799e-31 Identity = 68/112 (60.71%), Postives = 84/112 (75.00%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 338 + GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N RI+ L +SLMLVT LNP IGYDNAA +AK+AHK G TLK+AA KL L+ EEFD +VVPEKMI Sbjct: 349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPHIGYDNAAKIAKEAHKYGITLKEAAKKLNFLSEEEFDKIVVPEKMI 460
BLAST of DY256946 vs. ExPASy Swiss-Prot
Match: FUMC_RICTY (Fumarate hydratase class II OS=Rickettsia typhi GN=fumC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.349e-31 Identity = 67/112 (59.82%), Postives = 85/112 (75.89%), Query Frame = 3 Query: 3 VGGSNGHFELNVFKPMIASGLLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNAAAVAKKAHKEGTTLKDAALKLGVLNSEEFDNLVVPEKMI 338 + GSNGH ELNVFKP+I +L S+ LL D+ SF +CV+G++ N ERI+ L +SLMLVT LNP IGYDNAA +AK+A+K G TLK+AA KL L+ EEFD +V+PEKMI Sbjct: 349 IAGSNGHLELNVFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIERINALRDKSLMLVTVLNPHIGYDNAAKIAKEAYKYGITLKEAAKKLNFLSEEEFDKIVIPEKMI 460 The following BLAST results are available for this feature:
BLAST of DY256946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >DY256946 ID=DY256946; Name=DY256946; organism=Citrus clementina; type=EST; length=788bpback to top |