DY257022

Overview
NameDY257022
Unique NameDY257022
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length817
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.565e-25
Identity = 70/197 (35.53%), Postives = 101/197 (51.27%), Query Frame = 3
Query:   27 GIQGIAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGAN----MLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 602
            G+  +A A  + +   V     +SGGH+NPAVTFG  +  ++SL RAV Y   Q LGA+    +++        +  GGA      L+ G   G  +  E V TF  VY  + +  D KR     H+  +APL +GF +    LA  P  G G+NPAR  G AL+      W  HW++W GPF+GA LA L ++ ++
Sbjct:   66 GLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLR--------LATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALV---GWRWRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.044e-25
Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = 3
Query:   39 IAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA 578
            IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S TR V   + Q +  +            +       AN L  G S+  GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W GP +G+ LA
Sbjct:   94 IAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQIVAGMAAGGAASAMTPGEVLF----ANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = 3
Query:   27 GIQGIAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVK---GFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIV 599
            G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY I Q LGAI GA +V+   G     + + G GA          +G+  EI+ TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L   P +G  +NPARS G A+       + + WI+W GP +G  LA L ++ V
Sbjct:   56 GLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGD---YTNIWIYWVGPLVGGGLAGLVYRYV 234          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 69/189 (36.51%), Postives = 100/189 (52.91%), Query Frame = 3
Query:   39 IAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 602
            +A AFG+ +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L    S G     EI  T   V  +F+  D +RN +   V     L +GF++ L HL  +  TG G+NPARS   A++      + +HW++W GP IG  L +L +  ++
Sbjct:   44 VAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSFAPAILTGN---FTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.486e-25
Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 3
Query:   39 IAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA-NMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVI 602
            +A AFG+ +  LV     ISG H+NPAVTF   +  ++SL RA  YM  Q LGA+ GAAV+  +  +   + G  A N L  G S       EI  T   V  +F+  D +RN R   V     L +GF++ L HL  +  TG G+NPARS   A++    + + +HW++W GP IG  L +L +  ++
Sbjct:   44 VALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAIL---TRNFTNHWVYWVGPIIGGGLGSLLYDFLL 223          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.947e-25
Identity = 71/190 (37.37%), Postives = 103/190 (54.21%), Query Frame = 3
Query:   39 IAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDG-LGA---EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQI 596
            +A AFG  +F  V   A ISGGH+NPAVTFG F+   ++L R + Y I Q LG++    ++K           GG  + + G S G G L A   EIV TF LVYTV++     +N     +  +AP+ IGF V    LA    +G  +NPA + G A++      W +HW++WAGP +G  +A L +++
Sbjct:   63 VAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK--------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKN---GSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEV 236          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: AQPZ_SYNY3 (Aquaporin Z OS=Synechocystis sp. (strain PCC 6803) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.767e-25
Identity = 71/207 (34.30%), Postives = 101/207 (48.79%), Query Frame = 3
Query:    9 SKSFTVGIQGIAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLS---------KGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAA-LYHQIV 599
            +  F +G  G+A AFG+ +F   Y    ISGGH NPAV+FGL++ ++   ++   Y+  Q LGAI  +  +    +        G+N L+         +GY     L  E V TF+ +  +   TD    A        AP  IG A+ L+HL +IPIT T +NPARS G AL           W+FW  P  GA LA  +YH ++
Sbjct:   36 TNEFGLGYLGVALAFGLTVFTGAYALGHISGGHFNPAVSFGLWMGKRFPGSQLAPYIGAQVLGAIVASLFIFIVAQGGPNFSLDGSNPLATNGFGDHSPQGYGFLAALLIEFVLTFIFLIVILGVTDKTAPAG------FAPAAIGLALTLIHLISIPITNTSVNPARSTGVALFCGNPALIGQLWLFWLAPIAGALLAGFVYHNVL 236          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 72/200 (36.00%), Postives = 108/200 (54.00%), Query Frame = 3
Query:   27 GIQGIAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG----DGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAA-LYHQIVIRA 608
            G+  +A A    +F  V   A +SGGH+NPAVT GL +   +++   +FY I QCLG+     ++K         +  G ++ + G + G     G+  EI+ TF LVYTV+ +A D K+ +    + ++AP+ IGF V    LA  P +G  +NPARS G A+       +  +WI+WAGP IG ALA  +Y  + I A
Sbjct:   55 GLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK--------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGD---FSQNWIYWAGPLIGGALAGFIYGDVFITA 239          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 73/194 (37.63%), Postives = 104/194 (53.61%), Query Frame = 3
Query:   21 TVGIQGIAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGA---NMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYH 590
            T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   VFY I Q LG+     ++K        + GG A   + ++ G    +G+  EI+ TF LVYTV+ +A D K+ +    +  +APL IG  V    LA  P +G  +NPARS G A+       +  HW++W GP IG  LA L +
Sbjct:   53 TPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-------YVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGD---FSGHWVYWVGPLIGGGLAGLIY 232          
BLAST of DY257022 vs. ExPASy Swiss-Prot
Match: AQY2_YEAST (Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.014e-24
Identity = 68/180 (37.78%), Postives = 90/180 (50.00%), Query Frame = 3
Query:   39 IAWAFGVLIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALA 578
            IA  FG  +   ++C AG+SGG +NPAV+  L LAR +S  R V     Q +  +            +        N L  G S+  GL  E+ GT VL  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAA+       +  HWI+W GP +GA LA
Sbjct:   93 IALGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAISPARCVVMWFPQIIAGMAAGGAASAMTPGKVLF----TNALGLGCSRSRGLFLEMFGTAVLCLTVLMTAVEKRETN-----FMAALPIGISLFMAHMALTGYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGAFLA 261          
The following BLAST results are available for this feature:
BLAST of DY257022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
TIP32_MAIZE1.565e-2535.53Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQY1_YEAST2.044e-2537.78Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
TIP22_ORYSJ2.669e-2538.46Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_HUMAN3.486e-2536.51Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_CAVPO3.486e-2537.04Lens fiber major intrinsic protein OS=Cavia porcel... [more]
TIP11_ARATH5.947e-2537.37Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
AQPZ_SYNY37.767e-2534.30Aquaporin Z OS=Synechocystis sp. (strain PCC 6803)... [more]
TIP_ANTMA1.014e-2436.00Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP21_ARATH1.014e-2437.63Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQY2_YEAST1.014e-2437.78Aquaporin-2 OS=Saccharomyces cerevisiae GN=AQY2 PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CD10ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257022 ID=DY257022; Name=DY257022; organism=Citrus clementina; type=EST; length=817bp
AATCCAAAAGCAAATCTTTCACTGTGGGAATCCAGGGCATCGCTTGGGCT
TTTGGCGTTTTGATCTTCGCTCTAGTCTACTGCACTGCTGGCATTTCAGG
GGGTCACATTAACCCAGCGGTGACATTCGGGCTGTTCTTGGCCCGAAAGC
TGTCGCTTACCAGGGCAGTTTTTTACATGATAATGCAGTGTTTAGGGGCC
ATATGCGGTGCCGCCGTTGTAAAGGGCTTTCAGAAAAGCCAATATGAAAT
GCTAGGCGGCGGTGCCAACATGCTCAGCAAAGGCTACAGCAAGGGAGATG
GCCTTGGAGCCGAGATTGTTGGTACCTTTGTTCTTGTTTACACTGTCTTC
TCGGCCACTGATGCCAAGCGCAATGCCCGCGATTCTCATGTTCCTATATT
GGCACCCCTGCCCATAGGATTTGCTGTGTTTTTGGTGCACTTGGCAACAA
TTCCTATCACAGGAACAGGCATTAACCCAGCTAGGAGTCTTGGCGCAGCT
CTGATATACAACAAGGACCAAGCCTGGGATGATCATTGGATTTTCTGGGC
AGGACCATTCATTGGAGCAGCGCTTGCAGCTTTATATCATCAGATTGTGA
TCAGGGCCATCCCATTCAAGTCCAAATGATTAGTCATTAATTTCGATCCG
TTCAATTAATAGCCATGTATGGAGTTGAATTGCCCACTGTCACTGGGTTT
GCTTTTAATTATCTGCTGTATATGTACAACCCTTTGGTTGTTTGTGGCTC
TTGAATTGTGTATGACTATACATGTTCCAGGCCAATTCCTATTAAAAATA
AATTAATGTTTCTTGTC
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