DY257040

Overview
NameDY257040
Unique NameDY257040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_DAUCA (Sucrose synthase isoform 2 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 7.935e-103
Identity = 178/217 (82.03%), Postives = 196/217 (90.32%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VEWY    KLRELVNLVVVGGDRRKESKDLEEQA+MKKMY LID YKLNGQFRWIS+Q NRVRNGELYR I DTKGAFVQPA YEAFGLTV+EAMTCGLPTFAT  GGPAEIIV+G SG+HIDPYHGE+AAE++V+FFE+CK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDR+E RRYLEMF ALKYR LAESVPLAV+
Sbjct:  585 VEWYAKNPKLRELVNLVVVGGDRRKESKDLEEQAQMKKMYGLIDTYKLNGQFRWISAQKNRVRNGELYRCIADTKGAFVQPAFYEAFGLTVIEAMTCGLPTFATIHGGPAEIIVHGTSGFHIDPYHGEKAAELIVNFFERCKTEPSHWETISAGGLKRIQEKYTWQIYSERLLTLGGVYGFWKHVSKLDRIEIRRYLEMFCALKYRNLAESVPLAVD 801          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 3.120e-99
Identity = 169/217 (77.88%), Postives = 192/217 (88.48%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG  A+LREL NLV+V GD  KESKD EEQAE KKMYSLID+YKL G  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTV+E+MTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FF+KCKADPSYWD+IS GGL+RI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRY+EMFYALKYR LA  VPL+ +
Sbjct:  586 VEMYGKNARLRELANLVIVAGDHGKESKDREEQAEFKKMYSLIDEYKLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIESMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFDKCKADPSYWDEISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASQVPLSFD 802          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 5.322e-99
Identity = 170/217 (78.34%), Postives = 194/217 (89.40%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG   +L+ELVNLVVV GD  KESKDLEEQAE+KKMY LI++YKL G  RWIS+QMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVE+MTCGLPTFATC GGPAEIIV+G SG+HIDPYHG++A+E LV FFEKCK DP++W+KIS GGL+RI EKYTWK+YS+RL+TL GVYGFWK+VSNLDR E+RRYLEMFYALKYR LA+SVPLA++
Sbjct:  588 VELYGKNDRLKELVNLVVVAGDHGKESKDLEEQAELKKMYKLIEEYKLQGHIRWISAQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGFHIDPYHGDKASEQLVSFFEKCKEDPAHWEKISQGGLQRIYEKYTWKLYSERLMTLAGVYGFWKYVSNLDRRETRRYLEMFYALKYRNLAKSVPLAID 804          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS1_HORVU (Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.641e-98
Identity = 170/217 (78.34%), Postives = 191/217 (88.02%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG  A L++L NLV+V GD  KESKD EEQAE K+MYSLI++YKL G  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTV+EAMTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEK  ADPSYWDKIS GGLKRI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEMFYALKYR LA +VPLAV+
Sbjct:  585 VEMYGKNAHLKDLANLVIVAGDHGKESKDREEQAEFKRMYSLIEEYKLKGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKSTADPSYWDKISQGGLKRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMFYALKYRSLAAAVPLAVD 801          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 2.236e-97
Identity = 171/217 (78.80%), Postives = 192/217 (88.48%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE Y    +L+ELVNLVVV GD  K SKDLEEQAE+KKMYSLI++YKL+G  RWIS+QMNRVRNGELYRYI D+KG FVQPA YEAFGLTVVE+MTCGLPTFATC GGPAEIIV+G SGYHIDPYHG++AAE+LVDFFEK K D ++WD IS GGLKRI EKYTWKIYS+RLLTL GVYGFWK+VSNLDR E++RYLEMFYALKYR LA+SVPLAV+
Sbjct:  590 VELYAKNDRLKELVNLVVVCGDHAKASKDLEEQAELKKMYSLIEEYKLDGHIRWISAQMNRVRNGELYRYIADSKGVFVQPAFYEAFGLTVVESMTCGLPTFATCHGGPAEIIVHGVSGYHIDPYHGDKAAELLVDFFEKSKKDQTHWDAISNGGLKRIYEKYTWKIYSERLLTLAGVYGFWKYVSNLDRRETKRYLEMFYALKYRNLAKSVPLAVD 806          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.893e-96
Identity = 166/217 (76.50%), Postives = 187/217 (86.18%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG  A LR+L NLV+V GD   +SKD EEQAE KKMY LIDQYKL G  RWIS+QMNRVRNGELYRYICDTKG FVQPA YEAFGLTV+EAMTCGLPT ATC GGPAEIIV+G SG HIDPYH ++AA+ILV+FFEKCK D +YWD IS GGL+RI EKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRY+EMFYALKYR LA +VPLAV+
Sbjct:  586 VEMYGKNAHLRDLANLVIVCGDHGNQSKDREEQAEFKKMYGLIDQYKLKGHIRWISAQMNRVRNGELYRYICDTKGVFVQPAFYEAFGLTVIEAMTCGLPTIATCHGGPAEIIVDGVSGLHIDPYHSDKAADILVNFFEKCKQDSTYWDNISQGGLQRIYEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYIEMFYALKYRSLASAVPLAVD 802          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 4.217e-96
Identity = 167/217 (76.96%), Postives = 190/217 (87.56%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG   +L+ELVNLVVV GD    SKD EEQAE KKM+ LI+QY LNG  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+G SGYHIDPY G++A+ +LVDFF+KC+A+PS+W KIS GGL+RIEEKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEM YALKYR +A +VPLAVE
Sbjct:  594 VELYGRNKRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQGDKASALLVDFFDKCQAEPSHWSKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 349.362 bits (895), Expect = 1.602e-95
Identity = 166/217 (76.50%), Postives = 189/217 (87.10%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG   +L+ELVNLVVV GD    SKD EEQAE KKM+ LI+QY LNG  RWIS+QMNRVRNGELYRYICDTKGAFVQPA YEAFGLTVVE+MTCGLPTFAT  GGPAEIIVNG SG+HIDPY G++A+ +LV+FFEKC+ DPS+W KIS GGL+RIEEKYTWK+YS+RL+TLTGVYGFWK+VSNL+R E+RRYLEM YALKYR +A +VPLAVE
Sbjct:  594 VELYGRNPRLQELVNLVVVCGDHGNPSKDKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFGLTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPYQGDKASALLVEFFEKCQEDPSHWTKISQGGLQRIEEKYTWKLYSERLMTLTGVYGFWKYVSNLERRETRRYLEMLYALKYRTMASTVPLAVE 810          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS3_ORYSJ (Sucrose synthase 3 OS=Oryza sativa subsp. japonica GN=SUS3 PE=1 SV=2)

HSP 1 Score: 348.591 bits (893), Expect = 2.733e-95
Identity = 164/217 (75.58%), Postives = 192/217 (88.48%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG   +L+ELVNLVVV GD  KESKD EEQAE KKM++LI+QY LNG  RWIS+QMNRVRNGELYRYICD +GAFVQPALYEAFGLTV+EAMTCGLPTFAT  GGPAEIIV+G SGYHIDPY  ++A+ +LV+FFEKC+ DP++W KIS GGL+RIEEKYTWK+YS+RL+TL+GVYGFWK+V+NLDR E+RRYLEM YALKYRK+A +VPLA+E
Sbjct:  594 VELYGRNPRLQELVNLVVVCGDHGKESKDKEEQAEFKKMFNLIEQYNLNGHIRWISAQMNRVRNGELYRYICDMRGAFVQPALYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVHGVSGYHIDPYQNDKASALLVEFFEKCQEDPNHWIKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVTNLDRRETRRYLEMLYALKYRKMATTVPLAIE 810          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_HORVU (Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 SV=1)

HSP 1 Score: 342.813 bits (878), Expect = 1.500e-93
Identity = 163/217 (75.12%), Postives = 187/217 (86.18%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG   +L+ELVNLVVV GD  K SKD EEQ E KKM+ LI++Y L+G  RWIS+QMNRVRNGELYRYICD KGAFVQPA YEAFGLTV+EAMTCGLPTFAT  GGPAEIIVNG SGYHIDPY  ++A+ +LV FF KC+ DPS+W+KIS GGL+RIEEKYTWK+YS+RL+TL+GVYGFWK+VSNLDR E+RRYLEM YALKYRK+A +VPLAVE
Sbjct:  594 VEMYGRNPRLQELVNLVVVCGDHGKVSKDKEEQVEFKKMFDLIEKYNLSGHIRWISAQMNRVRNGELYRYICDMKGAFVQPAFYEAFGLTVIEAMTCGLPTFATAYGGPAEIIVNGVSGYHIDPYQNDKASALLVGFFGKCQEDPSHWNKISQGGLQRIEEKYTWKLYSERLMTLSGVYGFWKYVSNLDRRETRRYLEMLYALKYRKMAATVPLAVE 810          
The following BLAST results are available for this feature:
BLAST of DY257040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_DAUCA7.935e-10382.03Sucrose synthase isoform 2 OS=Daucus carota PE=2 S... [more]
SUS1_MAIZE3.120e-9977.88Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUS1_TULGE5.322e-9978.34Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_HORVU2.641e-9878.34Sucrose synthase 1 OS=Hordeum vulgare GN=SS1 PE=1 ... [more]
SUS2_TULGE2.236e-9778.80Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_ORYSJ1.893e-9676.50Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUS2_MAIZE4.217e-9676.96Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUS1_ORYSJ1.602e-9576.50Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUS3_ORYSJ2.733e-9575.58Sucrose synthase 3 OS=Oryza sativa subsp. japonica... [more]
SUS2_HORVU1.500e-9375.12Sucrose synthase 2 OS=Hordeum vulgare GN=SS2 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CG09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257040 ID=DY257040; Name=DY257040; organism=Citrus clementina; type=EST; length=874bp
GTGGAGTGGTATGGAAATATTGCTAAGCTACGTGAGTTGGTGAACTTAGT
CGTAGTGGGTGGCGATAGGAGAAAGGAGTCCAAGGACTTGGAAGAACAGG
CTGAAATGAAGAAGATGTATTCCCTCATTGATCAATACAAATTGAATGGC
CAGTTCCGATGGATCTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATT
GTACCGGTACATTTGTGATACAAAGGGAGCTTTTGTGCAACCTGCACTGT
ATGAGGCCTTTGGCTTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCA
ACATTTGCAACTTGCAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAA
ATCTGGCTACCACATTGATCCTTACCATGGTGAGCAGGCTGCTGAGATCC
TTGTTGACTTCTTTGAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAG
ATATCACTGGGTGGCCTGAAGCGTATTGAAGAGAAGTATACATGGAAAAT
TTACTCTCAGAGGCTTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAAC
ATGTATCTAACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTT
TATGCTCTCAAGTACCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGTGGA
GTAAATGGACATTGAGGAAGCTCTCAGGGTGGTTGGTCCGAGTGGAGATT
TCTCGAGTTGTGGAGAATAATGTCCCTTCTGGGATTGCGATTGGACAAAG
ACTTTTTTACCGGCTTAAATTTTCTTTTTTCAATTTTTTTTTTCCTTTTT
GCATTTCTCAGCATTGTTTGTACTTTGGGTGTTGCACCCTCATCAATTCC
ATTATAGTTTGTGACTTTTTTGGC
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