DY257040

Overview
NameDY257040
Unique NameDY257040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 5.167e-86
Identity = 152/218 (69.72%), Postives = 178/218 (81.65%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGD-RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE Y   +KLREL NLV+VGG     +S+D EE AE++KM+SLI+QY L+G+FRWI++QMNR RNGELYRYI DTKG FVQPA YEAFGLTVVE+MTC LPTFATC GGPAEII NG SG+HIDPYH +Q A  LV FFE C  +P++W KIS GGLKRI E+YTWK YS+RLLTL GVY FWKHVS L+R E+RRYLEMFY+LK+R LA S+PLA +
Sbjct:  586 VECYAKNSKLRELANLVIVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATD 803          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.374e-85
Identity = 152/216 (70.37%), Postives = 181/216 (83.80%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 645
            VE Y   +KLRELVNLVVV G    K+S D EE  E++KM+ L+ QY LNG+FRWI++Q NR RNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEII +G SG+HIDPYH +QA+E+LVDFF++CK DP++W+K+S GGL+RI E+YTWKIYS+RL+TL GVY FWK+VS L+R E+RRYLEMFY LK+R LA SVP+A
Sbjct:  592 VESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.171e-84
Identity = 153/218 (70.18%), Postives = 177/218 (81.19%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGG-DRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 651
            VE YG  AKLREL NLVVV G +  K+S D EE AE++KM+ LI +Y L GQFRWI+SQ NRVRNGELYRYICD  G F QPA YEAFGLTVVEAMTCGLPTFATC GGPAEII +G SG+HIDPYH +Q AE + +FF KC+ DP+YW KIS GGL RI+E+YTW+ YS+RL+TL GVYGFWK+VS L+R E+RRYLEMFY LK+R LA SVPLA +
Sbjct:  535 VECYGKNAKLRELANLVVVAGYNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGELYRYICDKGGIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATD 751          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.617e-63
Identity = 128/208 (61.54%), Postives = 150/208 (72.12%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKD---LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKY 615
            VE  G  A+LREL N V+V GD  KESKD    EEQ   KKMYSLID YK  G  R IS+QMNRVRNGELY+YICDTKGAFVQPA YEAF L                   P EII +G SG HIDPYH ++ A+ILV+FF+KC ADPSYWD+IS GG +RI EKYTWK+YS+RL+TLTG YGFW +VS L+R ++ RY++MFYAL+Y
Sbjct:   13 VEISGKKARLRELANPVIVAGDHGKESKDRDEAEEQGGFKKMYSLIDDYKFKGHIRLISAQMNRVRNGELYQYICDTKGAFVQPA-YEAFRLDCDRVHEVRSAKDRDLPWRPCEIIADGVSGLHIDPYHSDKDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.531e-18
Identity = 61/175 (34.86%), Postives = 86/175 (49.14%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL ++ G+R   +       + +  +  LIDQY L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  AD   W K    GLK I   Y+W  +S+  L+
Sbjct:  492 VKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDQYDLYGQVAY-PKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALL----KLVADKQLWTKCQQNGLKNI-HLYSWPEHSKTYLS 660          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.904e-17
Identity = 59/175 (33.71%), Postives = 87/175 (49.71%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +II    +G  IDP+  +  A+ L+    K  AD   W K    GLK I   ++W  + +  L+
Sbjct:  502 VKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLISILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALL----KLVADKHLWTKCRQNGLKNI-HLFSWPEHCKNYLS 670          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.098e-17
Identity = 58/175 (33.14%), Postives = 86/175 (49.14%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL ++ G+R   +       + +  +  LID+Y L G   +     N+    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I   Y+W  + +  LT
Sbjct:  507 VKAFGECRPLRELANLTLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALL----KLVADKNLWQECRRNGLRNI-HLYSWPEHCRTYLT 675          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  521 VKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 59/179 (32.96%), Postives = 90/179 (50.28%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  521 VKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 60/177 (33.90%), Postives = 86/177 (48.59%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 516
            V+ +G    LR+L NL ++ G+R   +       A +  +  +ID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP H +QA   + D   K  AD   W K    GLK I   ++W    K Y  R+
Sbjct:  492 VKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDP-HDQQA---IADALLKLVADKQLWAKCRANGLKNI-HLFSWPEHCKTYLSRI 662          
The following BLAST results are available for this feature:
BLAST of DY257040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_ARATH5.167e-8669.72Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_PEA4.374e-8570.37Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU2.171e-8470.18Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUSY_SACOF1.617e-6361.54Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS_BETVU3.531e-1834.86Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SPIOL3.904e-1733.71Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_MAIZE5.098e-1733.14Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_ORYSJ2.530e-1632.96Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI2.530e-1632.96Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_SOLTU3.305e-1633.90Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CG09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257040 ID=DY257040; Name=DY257040; organism=Citrus clementina; type=EST; length=874bp
GTGGAGTGGTATGGAAATATTGCTAAGCTACGTGAGTTGGTGAACTTAGT
CGTAGTGGGTGGCGATAGGAGAAAGGAGTCCAAGGACTTGGAAGAACAGG
CTGAAATGAAGAAGATGTATTCCCTCATTGATCAATACAAATTGAATGGC
CAGTTCCGATGGATCTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATT
GTACCGGTACATTTGTGATACAAAGGGAGCTTTTGTGCAACCTGCACTGT
ATGAGGCCTTTGGCTTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCA
ACATTTGCAACTTGCAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAA
ATCTGGCTACCACATTGATCCTTACCATGGTGAGCAGGCTGCTGAGATCC
TTGTTGACTTCTTTGAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAG
ATATCACTGGGTGGCCTGAAGCGTATTGAAGAGAAGTATACATGGAAAAT
TTACTCTCAGAGGCTTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAAC
ATGTATCTAACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTT
TATGCTCTCAAGTACCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGTGGA
GTAAATGGACATTGAGGAAGCTCTCAGGGTGGTTGGTCCGAGTGGAGATT
TCTCGAGTTGTGGAGAATAATGTCCCTTCTGGGATTGCGATTGGACAAAG
ACTTTTTTACCGGCTTAAATTTTCTTTTTTCAATTTTTTTTTTCCTTTTT
GCATTTCTCAGCATTGTTTGTACTTTGGGTGTTGCACCCTCATCAATTCC
ATTATAGTTTGTGACTTTTTTGGC
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