DY257040

Overview
NameDY257040
Unique NameDY257040
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length874
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL ++ G+R     D++E +      +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  ++ + W++    GLK I   ++W  + +  LT
Sbjct:  515 VKAFGECRPLRELANLTLIMGNR----DDIDEMSGGNASVLTTVLKLIDRYDLYGQVAF-PKHHKQSDVPEIYRLASKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALL----KLVSEKNLWNECRKNGLKNI-HLFSWPEHCRTYLT 683          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-15
Identity = 59/188 (31.38%), Postives = 90/188 (47.87%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRLLTLTGVYGFWK 549
            V+ +G    LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  IDP+  +  A+ L+    K  ++   W K    GLK I   ++W    K Y  ++ T    +  W+
Sbjct:  495 VKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLIDPHDEKSIADALL----KLVSNKQLWAKCRQNGLKNI-HLFSWPEHCKTYLSKIATCKPRHPQWQ 676          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.654e-15
Identity = 59/177 (33.33%), Postives = 85/177 (48.02%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 516
            V+ +G    LREL NL ++ G+R    +     A  +  +  LID+Y L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A+ L+    K  A    W +    GLK I   ++W    K Y  R+
Sbjct:  494 VKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSIADALL----KLVAGKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664          
BLAST of DY257040 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 1
Query:    1 VEWYGNIAKLRELVNLVVVGGDRRKESKDLEEQAE-MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 522
            V+ +G    LREL NL ++ G+R    +     A  +  +  +ID+Y L G   +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP++ E  A+ L+    K  A+   W K    GLK I   ++W  + +  L+
Sbjct:  493 VKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKYDLYGLVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGILVDPHNQESIADALL----KLVAEKHLWAKCRANGLKNI-HLFSWPEHCKSYLS 661          
The following BLAST results are available for this feature:
BLAST of DY257040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SPS2_CRAPL7.362e-1632.40Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_VICFA1.256e-1531.38Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS1_CITUN3.654e-1533.33Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS1_CRAPL4.772e-1532.00Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CG09ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257040 ID=DY257040; Name=DY257040; organism=Citrus clementina; type=EST; length=874bp
GTGGAGTGGTATGGAAATATTGCTAAGCTACGTGAGTTGGTGAACTTAGT
CGTAGTGGGTGGCGATAGGAGAAAGGAGTCCAAGGACTTGGAAGAACAGG
CTGAAATGAAGAAGATGTATTCCCTCATTGATCAATACAAATTGAATGGC
CAGTTCCGATGGATCTCTTCTCAGATGAATCGGGTCAGGAACGGTGAATT
GTACCGGTACATTTGTGATACAAAGGGAGCTTTTGTGCAACCTGCACTGT
ATGAGGCCTTTGGCTTGACTGTTGTTGAGGCCATGACCTGTGGATTGCCA
ACATTTGCAACTTGCAAGGGTGGCCCCGCTGAGATTATCGTTAACGGGAA
ATCTGGCTACCACATTGATCCTTACCATGGTGAGCAGGCTGCTGAGATCC
TTGTTGACTTCTTTGAGAAGTGCAAGGCAGATCCCTCATACTGGGACAAG
ATATCACTGGGTGGCCTGAAGCGTATTGAAGAGAAGTATACATGGAAAAT
TTACTCTCAGAGGCTTCTGACCCTGACTGGAGTCTATGGGTTCTGGAAAC
ATGTATCTAACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATGTTT
TATGCTCTCAAGTACCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGTGGA
GTAAATGGACATTGAGGAAGCTCTCAGGGTGGTTGGTCCGAGTGGAGATT
TCTCGAGTTGTGGAGAATAATGTCCCTTCTGGGATTGCGATTGGACAAAG
ACTTTTTTACCGGCTTAAATTTTCTTTTTTCAATTTTTTTTTTCCTTTTT
GCATTTCTCAGCATTGTTTGTACTTTGGGTGTTGCACCCTCATCAATTCC
ATTATAGTTTGTGACTTTTTTGGC
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