DY257045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_SOLLC (Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.201e-15 Identity = 63/264 (23.86%), Postives = 123/264 (46.59%), Query Frame = 1 Query: 193 VITGDNGTIDGQGEPWW-RKFRVGELKYTR--PYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG----IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAARLKXLAGGSF--TGICLSNVTI 957 ++ G GTI+G G+ WW ++ + R P + + +N++++NL N+ ++ ++V+ + I A SPNTDG++ + +I D I +GDDC+++ SG ++ + +TC I++GS SG + +V + I +E+GVRIKT G G +I + M+ +K+ I +Y + + +++N+ Y ++ + A +K +F GI + N+ + Sbjct: 166 LVVGGGGTINGNGQVWWPSSCKINKSLPCRDAPTALTFWNCKNLKVNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGDDCISIVSG-----------SQNVQATNITCGPGHG--ISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKTWQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSATKVA-IKFDCSTNFPCEGIIMENINL 415
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.404e-15 Identity = 59/211 (27.96%), Postives = 108/211 (51.18%), Query Frame = 1 Query: 187 DVVITGDNGTIDGQGEPWWRKFRVGELKYTR--PYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFS-AVIALGS-EMSGGIQDVRAEDITAIDSESGVRIKTAVGRG-GFVKDIYVRRMTMKTMKWAFWITGSYGS 804 ++V+TG GT G+GE W+ G+ P ++ + +N++I+ ++ +N+ ++++ V + +V +Q I + AP SPNTDGI+ + N I D I +GDDCV+V G + + + R+ C +V +LG + + + + T I++++G+RIKT G DI + M+++K I +YGS Sbjct: 137 NLVLTG-TGTFHGKGEAVWKADGCGKKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSV-----------GRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGS 335
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR2_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=pehA PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.433e-14 Identity = 77/261 (29.50%), Postives = 118/261 (45.21%), Query Frame = 1 Query: 136 DTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGE--------PWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSS--VIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAK 879 D G + I + T+ I G GTIDGQG WW +V +LK P LI+I S+N + N++LINSP N H V+S TI P T+ NTDGI+P S N I I +GDD VA+K AY + I L +++GSE + G+ +V +D+ + +G+RIK+ G V + + MK + I Y + + +P+ +I ++D+ ++ Sbjct: 119 DKNGKGCDAFITAVSTTNSGIYGP-GTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIK--------AYKGRAETRNISILHNDFGTGHGMSIGSE-TMGVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVY-----EKKEGSNVPDWSDITFKDVTSE 362
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.421e-14 Identity = 60/245 (24.49%), Postives = 106/245 (43.27%), Query Frame = 1 Query: 142 EGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINY 861 EG ++ L+ + + G GT++G G+ WW K P + +N+++ NL +I+S ++ V + G+ ++AP TSPNTDGI+ I++ + +GDDC+++ + Q+ I + C I +LG S ++D+ + D+ +GVRIKT G G V I R + M + I Y + + I+NI++ Sbjct: 129 EGLNRRKWLYFHGLSRLTVEG-GGTVNGMGQEWWERSCKHNHSNPCRGAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIVIDNTTVSTGDDCISIVKN-----------STQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISF 361
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: QRT2_ARATH (Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.208e-13 Identity = 59/236 (25.00%), Postives = 107/236 (45.34%), Query Frame = 1 Query: 178 NLTDVVITGDNGTIDGQGEPWWRKFRVGELKYT---RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMSGG-IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDM 870 N+ ++ + G G IDG G WW K + P + + N+++SN+ L N+ ++ +V + + +P SPNTDGI+ N I+D + +GDDC+++ SG ++ + +TC I +LG + S + +V T I + +GVRIKT G G K+I + + MK + I Y + + + ++ N+ Y+++ Sbjct: 157 NVNNLRVEG-GGRIDGNGHIWWPKSCKINPQLPCLGAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGTQNILIQDSIVRTGDDCISIVSG-----------SENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNI 380
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_ACTDE (Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.744e-12 Identity = 57/229 (24.89%), Postives = 104/229 (45.41%), Query Frame = 1 Query: 211 GTIDGQGEPWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQG--ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGG----IQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDM 870 GTI+G G+ WW+ K P + S+++ + NL + N+ +H + + V VQ + + AP SPNTDGI+ N I C I +GDDC+++ +G ++++ + +TC I++GS G + DV + +GVRIKT G G +I + + M ++ I +Y + + +++N+ Y+++ Sbjct: 185 GTINGNGKIWWQNSCKTNKALPCKDAPTALTFYKSKHVIVKNLKIENAQQ--IHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGDDCISIVNG-----------SRKVRVNDITCGPGHG--ISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNI 398
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_PRUPE (Polygalacturonase OS=Prunus persica PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.975e-12 Identity = 71/248 (28.63%), Postives = 115/248 (46.37%), Query Frame = 1 Query: 148 GRYSSLIFGTNLTDVVITGDNGTIDGQGEPWWR-KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEM-SGGIQDVRAEDITAIDSESGVRIKTAVGR--GGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALP--EIQNINYRDM 870 G ++ IF ++ V I+G G +DGQG W K GE + + S NI +S L +NS +++ +V +QG+ + SPNTDGI+ + I + I +GDDCV++ G T L I + C I +LG E G+Q+V + +T +++G+RIK + GR GF ++I + TM ++ I Y PD P + +I ++ Y D+ Sbjct: 104 GNAANWIFFHHVNGVTISG--GILDGQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPG-----------TSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIK-SWGRPSTGFARNILFQHATMVNVENPIVIDQHY--CPDNKGCPGQVSGVQISDVTYEDI 335
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_PERAE (Polygalacturonase OS=Persea americana PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.975e-12 Identity = 63/277 (22.74%), Postives = 122/277 (44.04%), Query Frame = 1 Query: 178 NLTDVVITGDNGTIDGQGEPWWR---KFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVI-ALGSEMS-GGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNV-XMAARLKXLAGGSFTGICLSNVTIDLTNKPKKTSL 990 +++++ + G GT +G GE WW K + + P + +N+ +S+L++ +S ++ VI + + AP SPNTDGI+ + + I +GDDC++++SG +K +I +TC I +LG S + V + D+ +G+RIKT G G K+I + + M + I Y D + + ++ N+ Y ++ + +A + G + N+ + + N K+T++ Sbjct: 170 DISNLTLEG-GGTSNGNGETWWDSSCKRKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIASNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESG-----------SKMVIATNITCGPGHGISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNPIIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNINL-VGNGGKETTM 433
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR4_ARATH (Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.074e-12 Identity = 66/284 (23.24%), Postives = 125/284 (44.01%), Query Frame = 1 Query: 58 DAVLLASQDEKEWPVIEPLPSYGRGRDTEGGRYSSLIFGTNLTDVVITGDNGTIDGQGEPWW----RKFRVGELKYTR-----PYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS----EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDM 870 D VL+ +EWP + + L+F L +G GT++G G+ WW + R + + P +I S NI++ L + NSP +++ V++ I I +P SPNTDGI+ + + I + + +GDDC+++ +G + I+ +TC P S I++GS + ++ + DS++G+R+KT G G V ++ + M+ + + Y D + A+ ++ ++ YR++ Sbjct: 142 DGVLMPPDGPEEWP-------------EKDNKNQWLVF-YRLDGFTFSG-KGTVEGNGQKWWDLPCKPHRGPDGSSSSGPCASPTMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVGIYNSVVSNGDDCISIGTG-----------CSDVDIQGVTC-GP-SHGISIGSLGVHNSQACVSNITVRNTVIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNETSAV-KVFDVEYRNI 396
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_MALDO (Polygalacturonase OS=Malus domestica PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.610e-11 Identity = 63/247 (25.51%), Postives = 114/247 (46.15%), Query Frame = 1 Query: 163 LIFGTNLTDVVITGDNGTIDGQGEPWWR---KFRVGELKYT-RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQG--ITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQD----VRAEDITAIDSESGVRIKTAVGRGGFVKDIYVRRMTMKTMKWAFWITGSYGSHPDK-YYDPHALPEIQNINYRDM 870 LIF N+ ++++ G GTI+G G WW+ K + T P + N+ + NL + ++ +H ++ + + VQ +T+ AP SPNTDGI+ + N I I +GDDC+++ SG ++++ +TC I++GS G +D V + +G+RIKT G G +I + + M + I +Y H K + +++N+ Y+++ Sbjct: 179 LIFD-NVQNLLVVGP-GTINGNGNIWWKNSCKIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQ--IHVIFQNCINVQASCLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSG-----------SQRVQATDITCGPGHG--ISIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKDCKQQKSAVQVKNVLYQNI 408 The following BLAST results are available for this feature:
BLAST of DY257045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257045 ID=DY257045; Name=DY257045; organism=Citrus clementina; type=EST; length=1296bpback to top |