DY257045
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR_YEAST (Polygalacturonase OS=Saccharomyces cerevisiae GN=PGU1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.569e-11 Identity = 65/273 (23.81%), Postives = 116/273 (42.49%), Query Frame = 1 Query: 154 YSSLIFGTNLTDVVITGDNG-TIDGQGEPWWRKFRVGELKYTRPYLIEIMHSQNIQISNLTLINSPSWNVHPVYS----SSVIVQGITILA----PVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSG----------WDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGSEMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGFVKDI-YVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNVXMAARLKXL 912 +S + + + + + G +G TIDGQG WW +G+ +P +++ + +++ L + N+P H V+S S + + ITI NTDG + S +N I+ C + + DDC+AV SG ++ +GI+ G ++G + AE+ I+S++G+RIKT G G V ++ ++ + I G Y + +P I N+ +D+ A R+K L Sbjct: 83 WSGPLISISGSKISVVGASGHTIDGQGAKWWDG--LGDSGKVKPKFVKLALTGTSKVTGLNIKNAP----HQVFSINKCSDLTISDITIDIRDGDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSGSTIKFMNNYCYNGHGISVG---------------------SVGGRSDNTVNGFWAENNHVINSDNGLRIKTVEGATGTVTNVNFISNKISGIKSYGIVIEGDYLNSKTTGTATGGVP-ISNLVMKDITGSVNSTAKRVKIL 327
BLAST of DY257045 vs. ExPASy Swiss-Prot
Match: PGLR1_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.569e-11 Identity = 70/281 (24.91%), Postives = 122/281 (43.42%), Query Frame = 1 Query: 187 DVVITGDNGTIDGQGEPWWRKFRVGELKYT---RPYLIEIMHSQNIQISNLTLINSPSWNVHPVYSSSVIVQGITILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDQYGIAYGMPTKQLIIRRLTCISPFSAVIALGS----EMSGGIQDVRAEDITAIDSESGVRIKTAVGRGGF--VKDIYVRRMTMKTMKWAFWITGSYGSHPDKYYDPHALPEIQNINYRDMVAKNV------XMAARLKXLAGGSFTGICLSNVTIDLTNKPKKT 984 ++VITG G +DGQG W K + KY P + + N ++S +TL+NS ++++ ++++ +T+ AP SPNTDGI+ + I + I GDDC+++ G T ++ I +TC I++GS + + D+ +D T + GVRIK V I+ + M+ +I Y P+K + + +D+ KN+ A L A TG+ + +V ++ + KT Sbjct: 129 NLVITG-KGNLDGQGPAVWSKNSCTK-KYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG-----------TSKVNITGVTCGPGHG--ISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKY--CPNKLCTANG---ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKT 389 The following BLAST results are available for this feature:
BLAST of DY257045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257045 ID=DY257045; Name=DY257045; organism=Citrus clementina; type=EST; length=1296bpback to top |