DY257794

Overview
NameDY257794
Unique NameDY257794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length851
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB5_PEA (Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 5.541e-29
Identity = 76/148 (51.35%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FT++QEALV  SW   K+N G   L F+  I + AP+ K +F+FLKDS   V  +PKL+ HA  VF M  +SAVQLR +G+V + ++ L   GA H + GV D HF V K ALLETIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:    3 FTDKQEALVNSSWELFKQNPGYSVL-FYNIILKKAPATKGMFSFLKDS-AGVVDSPKLQAHAEKVFGMVHDSAVQLRVSGEVVLGDATL---GAIHIQKGVVDSHFVVVKEALLETIKEASGEKWSEELSTAWEVAYEGLASAIKKAM 145          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB3_SESRO (Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 71/148 (47.97%), Postives = 95/148 (64.19%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FTE+QEALV  S+ A K+N    ++ F+  I E AP+AK +F+FLKD D   + NP L+ HA  VF +  +SA QLR  G V + +++   LG+ H + GV D HF V K ALL+T+KEA    WS E+ NAW  AYD+L+AAIK  M
Sbjct:    3 FTEKQEALVNASYEAFKQNLPGNSVLFYSFILEKAPAAKGMFSFLKDFDEVPQNNPSLQAHAEKVFGLVRDSAAQLRATGVVVLADAS---LGSVHVQKGVLDPHFVVVKEALLKTLKEAGGATWSDEVSNAWEVAYDELSAAIKKAM 147          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB2_PEA (Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.234e-28
Identity = 73/148 (49.32%), Postives = 93/148 (62.84%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FT++QEALV  SW + K+N    ++ F+  I E AP+AK LF+FLKD+   VE +PKL+ HA  VF +  +SA QLR  G+V +  + L   GA H + GV D HF V K ALL+TIK+A    WS EL  AW  AYD LA AIK  M
Sbjct:    3 FTDKQEALVNSSWESFKQNLSGNSILFYTIILEKAPAAKGLFSFLKDT-AGVEDSPKLQAHAEQVFGLVRDSAAQLRTKGEVVLGNATL---GAIHVQRGVTDPHFVVVKEALLQTIKKASGNNWSEELNTAWEVAYDGLATAIKKAM 146          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB3_VICFA (Leghemoglobin 49 OS=Vicia faba PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28
Identity = 74/148 (50.00%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FT++QEALV  SW + K+N     L F+  I E AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QL+  G+V ++  +L   GA H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA AIK  M
Sbjct:    3 FTQQQEALVNSSWESFKQNPSYSVL-FYTIILEKAPAAKGMFSFLKDS-AGVVDSPKLQAHAEQVFGMVRDSAIQLQATGEVVLKNGSL---GAIHIQKGVVDPHFVVVKEALLKTIKEASGDKWSEELSIAWEVAYDGLATAIKKAM 145          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB4_PEA (Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 75/148 (50.68%), Postives = 94/148 (63.51%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FTE+QEALV  SW   K+N     L F+  I + AP+AK +F+FLKDS   V  +PKL+ HA  VF M  +SA+QLR +G+V + +  L   GA H + GV D HF V K ALL+TIKEA  E WS EL  AW  AY+ LA+AIK  M
Sbjct:    3 FTEKQEALVNSSWELFKQNPSYSVL-FYTIILKKAPAAKGMFSFLKDS-AEVVDSPKLQAHAEKVFGMVHDSAIQLRASGEVVLGDVTL---GAIHIQKGVIDPHFVVVKEALLDTIKEASGEKWSEELSTAWEIAYEGLASAIKKAM 145          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB1_LUPLU (Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3)

HSP 1 Score: 126.331 bits (316), Expect = 2.106e-28
Identity = 70/148 (47.30%), Postives = 89/148 (60.14%), Query Frame = 2
Query:  278 TEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEMK 721
            T+ Q ALV  S+     N  +   +FF  + EIAP AK LF+FLK S    + NP L+ HA  VF +T E+A+QL+  G V   ++ LK LG+ H   GV D HF V K A+L+TIKE V + WS EL  AW  AYD+LA  IK EMK
Sbjct:    5 TDVQVALVKSSFEEFNANIPKNTHRFFTLVLEIAPGAKDLFSFLKGSSEVPQNNPDLQAHAGKVFKLTYEAAIQLQVNGAVA-SDATLKSLGSVHVSKGVVDAHFPVVKEAILKTIKEVVGDKWSEELNTAWTIAYDELAIIIKKEMK 151          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB1_MEDTR (Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.045e-27
Identity = 72/149 (48.32%), Postives = 94/149 (63.09%), Query Frame = 2
Query:  272 AFTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIKTEM 718
            +FT++QEALV  S+ A K+N    ++ F+  I E AP+AK LF+FLKDS   V+ +P+L+ HA  VF +  +SA QLR  G V + ++ L   GA H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA  IK  M
Sbjct:    2 SFTDKQEALVNSSYEAFKQNLSGYSVFFYTVILEKAPAAKGLFSFLKDS-AGVQDSPQLQAHAEKVFGLVRDSASQLRATGGVVLGDAAL---GAIHIQKGVVDPHFVVVKEALLKTIKEAAGDKWSEELSTAWEVAYDALATEIKKAM 146          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB_LOTJA (Leghemoglobin OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.574e-26
Identity = 69/149 (46.31%), Postives = 95/149 (63.76%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAV-PEMWSPELKNAWAEAYDQLAAAIKTEM 718
            FT +QEALV  S+   KKN    ++ F+  I EIAP+AK +F+FLK+S    + +P+L+ HA  VF +T ++A QL   G+VT+ +++   LGA H +  V D HF V K ALL+T+KEAV  + WS +L  AW  AYD LA AIK  M
Sbjct:    3 FTAQQEALVGSSYETFKKNLPTNSVLFYTVILEIAPTAKDMFSFLKESG--PKHSPQLQAHAEKVFALTRDAATQLVAKGEVTLADAS---LGAVHVQKAVTDPHFVVVKEALLQTVKEAVGADEWSDDLSTAWEGAYDGLATAIKKAM 146          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB1_VICFA (Leghemoglobin-1 OS=Vicia faba PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.361e-26
Identity = 71/145 (48.97%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 709
            FTE+QEALV  S    K+N    ++ F+  I + AP+AK +F+FLKDS   V  +PKL  HA  VF M  +SAVQLR  G+V +   +    G+ H + GV D HF V K ALL+TIKEA  + WS EL  AW  AYD LA AIK
Sbjct:    3 FTEKQEALVNSSSQLFKQNPSNYSVLFYTIILQKAPTAKAMFSFLKDS-AGVVDSPKLGAHAEKVFGMVRDSAVQLRATGEVVLDGKD----GSIHIQKGVLDPHFVVVKEALLKTIKEASGDKWSEELSAAWEVAYDGLATAIK 142          
BLAST of DY257794 vs. ExPASy Swiss-Prot
Match: LGB_PSOTE (Leghemoglobin OS=Psophocarpus tetragonolobus PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.489e-26
Identity = 69/145 (47.59%), Postives = 89/145 (61.38%), Query Frame = 2
Query:  275 FTEEQEALVVKSWNAMKKNSGELALKFFLRIFEIAPSAKKLFTFLKDSDIPVEQNPKLKPHATTVFVMTCESAVQLRKAGKVTVRESNLKDLGATHFKYGVADEHFEVTKYALLETIKEAVPEMWSPELKNAWAEAYDQLAAAIK 709
            FTE+QEALV  S+ A K N  + ++ F+  I E AP+AK LF FL +   P   NPKL  HA  +F +  +SA QLR  G V    +    LG+ H + GV D  F V K ALL+T+KEAV + WS EL NAW  AY++LAAA+K
Sbjct:    4 FTEKQEALVNSSYEAFKANVPQYSVVFYTSILEKAPAAKDLFPFLANGVDPT--NPKLIGHAEKLFGLVHDSAAQLRAKGAVVADAA----LGSLHAQKGVTDPQFVVVKEALLKTVKEAVGDKWSDELSNAWEVAYNELAAALK 142          
The following BLAST results are available for this feature:
BLAST of DY257794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
LGB5_PEA5.541e-2951.35Leghemoglobin Lb120-29 OS=Pisum sativum PE=2 SV=3[more]
LGB3_SESRO9.451e-2947.97Leghemoglobin 3 OS=Sesbania rostrata GN=GLB3 PE=2 ... [more]
LGB2_PEA1.234e-2849.32Leghemoglobin Lb5-10 OS=Pisum sativum PE=2 SV=3[more]
LGB3_VICFA1.612e-2850.00Leghemoglobin 49 OS=Vicia faba PE=2 SV=3[more]
LGB4_PEA2.106e-2850.68Leghemoglobin Lb120-8 OS=Pisum sativum PE=2 SV=3[more]
LGB1_LUPLU2.106e-2847.30Leghemoglobin-1 OS=Lupinus luteus PE=1 SV=3[more]
LGB1_MEDTR1.045e-2748.32Leghemoglobin 1 OS=Medicago truncatula GN=LB1 PE=2... [more]
LGB_LOTJA2.574e-2646.31Leghemoglobin OS=Lotus japonicus PE=2 SV=1[more]
LGB1_VICFA3.361e-2648.97Leghemoglobin-1 OS=Vicia faba PE=1 SV=2[more]
LGB_PSOTE7.489e-2647.59Leghemoglobin OS=Psophocarpus tetragonolobus PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CA02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257794 ID=DY257794; Name=DY257794; organism=Citrus clementina; type=EST; length=851bp
GCTCCCTCAATTTTCTGCTCTGCATCTTGTGGCCATTCATAGTGTTGCTT
CAAAAGCTACAACCATGCTACTCTCAAATGATTCTGTCATCTACAAGTGT
GATACAAGGGATTTGAGTAAGATTTTTGCAACCTCAACGTCAAGAGTTAG
GCATCAACAATACGTGAATCTCTCATGGAAGATGAGGGATGGATCATTGA
AGGGTCTTTTTTGCACAGCTCCAAAATCAATCAGAAGTGTGAGGAGGAAC
AGCGGAAGCTTCAACGTGACTGCTTTTACAGAAGAGCAAGAGGCTCTAGT
GGTCAAATCTTGGAATGCCATGAAAAAAAATTCTGGGGAACTTGCTCTTA
AGTTCTTCTTGAGGATCTTTGAGATTGCACCATCAGCAAAGAAGCTGTTC
ACTTTTCTCAAAGATTCAGATATTCCTGTGGAGCAGAATCCGAAACTAAA
GCCCCATGCCACGACTGTCTTTGTTATGACGTGTGAATCGGCAGTGCAAC
TTAGAAAGGCTGGCAAAGTTACAGTGAGAGAGTCCAATCTAAAAGACTTG
GGAGCTACCCATTTCAAATACGGAGTTGCTGATGAACATTTTGAGGTGAC
AAAGTATGCATTGTTGGAGACCATAAAGGAAGCAGTACCTGAAATGTGGT
CACCAGAGTTGAAGAATGCTTGGGCGGAGGCTTATGATCAACTGGCTGCC
GCCATCAAAACTGAAATGAAGCCTCCTTCATAATTTGCTGATTGAATGTA
AAAGTGATGCTGTTTCATGGAAAAAAATAATATTGTAAAAATGTCATGTA
ATCATCAATTATCGAATATTGTGTTGATCTAATCTAAGATCCAGTTCTCT
C
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