DY257807

Overview
NameDY257807
Unique NameDY257807
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length753
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_CANGA (Pyruvate decarboxylase OS=Candida glabrata GN=PDC1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.264e-20
Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            + K L     VI ETG S F   +   P       Q+ +GSIG++ GA LG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I+NW++  L+     G       +V    E  +  ++    K   +  IEV++   D    L+E     ++ N++
Sbjct:  374 VSKFLQEGDVVITETGTSAFGINQTPFPNNAYGISQVLWGSIGFTTGACLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGEKAGYNDIQNWDHLALLPTF--GAKDYENHRVATTGEWDKLTQDKEFNKNSKIRMIEVMLPVMDAPTSLIEQAKLTASINAK 562          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20
Identity = 65/176 (36.93%), Postives = 92/176 (52.27%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE--KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 520
            + + L  +  VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E  +R +  +GDGSFQ+T Q+VSTM+R     IIF+I N GYTIE  IH  +  YN I+ W++  +  A    + K    KV   +EL E   N       CL  +E+ + +DD    L
Sbjct:  382 VGQWLKEKDVVITETGTANFGIWDTRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGRRTVLFVGDGSFQLTLQEVSTMIRNNLNPIIFVICNEGYTIERYIHGWEAVYNDIQPWDFLNIPVAF-GAKDKYKGYKVTTRDELRELFANEEFASAPCLQLVELHMPRDDCPASL 556          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC4_SCHPO (Putative pyruvate decarboxylase C3G9.11c OS=Schizosaccharomyces pombe GN=SPAC3G9.11c PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.043e-20
Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 2
Query:   17 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGA----TLGYAQS-VPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIK-NWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            L     V  ETG S F       PKGC    Q+ +GSIGWSVGA    TLG   S  P +R I  +GDGS  +T Q++S  +R G   IIF+INN GYTIE  IH     YN I   W+Y  L+     G     +  +  E+EL++  ++    K D +  +EV +   D  + L+E     ++ N +
Sbjct:  384 LRESDVVTTETGTSNFGILDCIFPKGCQNLSQVLWGSIGWSVGAMFGATLGIKDSDAPHRRSILIVGDGSLHLTVQEISATIRNGLTPIIFVINNKGYTIERLIHGLHAVYNDINTEWDYQNLLKGY--GAKNSRSYNIHSEKELLDLFKDEEFGKADVIQLVEVHMPVLDAPRVLIEQAKLTASLNKQ 570          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19
Identity = 65/191 (34.03%), Postives = 95/191 (49.74%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLEWGSRVSAANSR 559
            + + L     VI ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I+NW +  L+     G       +V    E  +   +        +  IEV++   D    L++     +A N++
Sbjct:  374 VGEFLREGDVVITETGTSAFGINQTHFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQNWQHLELLPTF--GAKDYEAVRVSTTGEWNKLTTDEKFQDNTRIRLIEVMLPTMDAPSNLVKQAQLTAATNAK 562          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: DCIP_ENTCL (Indole-3-pyruvate decarboxylase OS=Enterobacter cloacae GN=ipdC PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.916e-19
Identity = 58/170 (34.12%), Postives = 94/170 (55.29%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIH-NGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDD 505
            +Q  +     ++A+ G S F    L+LP    +  Q  +GSIG+++ A  G   + P +RVI   GDG+ Q+T Q++ +MLR  Q  II ++NN GYT+E  IH  +  YN I  WN+T +  A+  + + +CW  +V   E+L + +E     ++  L  IEV++ K D
Sbjct:  369 LQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECW--RVSEAEQLADVLEKVAHHER--LSLIEVMLPKAD 534          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.503e-19
Identity = 65/178 (36.52%), Postives = 95/178 (53.37%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWT-TKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 520
            I + L     VI ETG + F   + + P G     Q+ +GSIG+SVGA  G A +  E   +R I  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  +  YN I+ W+Y  L  A   G GK +   +V  ++++I+  EN        L  +E+ + ++D    L
Sbjct:  382 IGQWLKENDIVITETGTANFGIWETRFPAGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTILFVGDGSIQLTLQEISTMIRNKLNPIIFVICNEGYTIERYIHGWEASYNDIQQWDYKSLPVAF--GAGKDYKGYRVKTKDDMIKLFENTEFASAPFLQLVELYMPREDAPSAL 557          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.576e-19
Identity = 65/164 (39.63%), Postives = 84/164 (51.22%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSV----PEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGL-----------VDAIHNGE-GKCWTTKVFCEEELIEAIE 442
            + K L     V+ ETG S F   +   P       Q+ +GSIG++ GATLG A +     P+KRVI  IGDGS Q+T Q++STM+R G K  +F++NN GYTIE  IH     YN I++W +  L           V     GE  K  T K F E   I  IE
Sbjct:  374 VGKFLQEGDVVLTETGTSAFGINQTHFPNDTYGISQVLWGSIGFTGGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQSWKHLDLLPTFGAKDYEAVRVATTGEWNKLTTDKKFQENSKIRLIE 537          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_EMENI (Pyruvate decarboxylase OS=Emericella nidulans GN=pdcA PE=3 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.767e-18
Identity = 61/161 (37.89%), Postives = 84/161 (52.17%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCL 472
            + + L     VI ETG + F     + P G     Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     IIF+I N GYTIE  IH  D  YN I+ W+  GL  A   G+G+    KV   +EL +   +       CL
Sbjct:  381 VGQWLKENDIVITETGTANFGIWDTRFPSGVTAISQVLWGSIGYSVGACQGAALAAKEQGNRRTVLWVGDGSLQLTLQEISTMIRNNLNPIIFVICNEGYTIERFIHGWDESYNDIQTWDIKGLPVAF-GGKGRYKGYKVTTRDELTKLFASEEFSSAPCL 540          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: KDC_MYCPA (Alpha-keto-acid decarboxylase OS=Mycobacterium paratuberculosis GN=kdc PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.767e-18
Identity = 55/172 (31.98%), Postives = 97/172 (56.40%), Query Frame = 2
Query:   17 LSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPEKRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKELLE 526
            L+    V+A+ G S++     +LP+G  +  Q  +GSIG+++ A LG A + P++R +  IGDG+ Q+T Q++ T  R G   +I ++NN GYT+E  IH    PYN I  W +T + +A+   E   +  + +   EL +A+  A    +D +  +EV++ + +  + L+E
Sbjct:  382 LTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGTFAREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVGWKWTEVPNALGVTEHLAFRVQTY--GELDDAL-TAAARHQDRMVLVEVVLPRLEIPRLLVE 550          
BLAST of DY257807 vs. ExPASy Swiss-Prot
Match: PDC_ASPTN (Pyruvate decarboxylase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pdcA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.614e-18
Identity = 61/177 (34.46%), Postives = 89/177 (50.28%), Query Frame = 2
Query:    5 IQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQMQYGSIGWSVGATLGYAQSVPE---KRVIACIGDGSFQVTAQDVSTMLRCGQKTIIFLINNGGYTIEVEIH--DGPYNVIKNWNYTGLVDAIHNGEGKCWTTKVFCEEELIEAIENATGPKKDCLCFIEVLVHKDDTSKEL 520
            + + L     VI ETG + F     + P       Q+ +GSIG+SVGA  G A +  E   +R +  +GDGS Q+T Q++STM+R     I+F+I N GYTIE  IH  D  YN I+ W+  GL   +   + K    +V   +EL +   N       CL  +E+ + +DD    L
Sbjct:  382 VGQWLKERDIVITETGTANFGIWDTRFPANVTAISQVLWGSIGYSVGACQGAALAAKEQNNRRTVLFVGDGSLQLTVQEISTMIRNNLNPIVFVICNQGYTIERFIHGWDEAYNDIQPWDIKGL-PVVFGAKDKYKGYRVKTRDELTKLFANDEFNSVPCLQLVELHMPRDDAPASL 557          
The following BLAST results are available for this feature:
BLAST of DY257807 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
PDC1_CANGA2.264e-2034.55Pyruvate decarboxylase OS=Candida glabrata GN=PDC1... [more]
PDC_ASPOR5.043e-2036.93Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
PDC4_SCHPO5.043e-2035.98Putative pyruvate decarboxylase C3G9.11c OS=Schizo... [more]
PDC1_KLULA1.916e-1934.03Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
DCIP_ENTCL1.916e-1934.12Indole-3-pyruvate decarboxylase OS=Enterobacter cl... [more]
PDC_ASPFU2.503e-1936.52Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]
PDC1_KLUMA5.576e-1939.63Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
PDC_EMENI2.767e-1837.89Pyruvate decarboxylase OS=Emericella nidulans GN=p... [more]
KDC_MYCPA2.767e-1831.98Alpha-keto-acid decarboxylase OS=Mycobacterium par... [more]
PDC_ASPTN3.614e-1834.46Pyruvate decarboxylase OS=Aspergillus terreus (str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAB1CD01ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257807 ID=DY257807; Name=DY257807; organism=Citrus clementina; type=EST; length=753bp
ACATATACAGAAGATGCTGTCTAGTGAAACTGCTGTGATTGCTGAGACAG
GGGACTCTTGGTTTAACTGCCAGAAACTGAAATTGCCTAAGGGATGCGGG
TATGAGTTCCAAATGCAATATGGATCAATTGGTTGGTCTGTTGGTGCTAC
TCTTGGATATGCACAGTCTGTGCCAGAGAAGCGTGTCATTGCTTGCATAG
GTGATGGTAGCTTCCAGGTAACTGCACAAGATGTGTCAACAATGCTGCGA
TGTGGGCAGAAGACTATAATCTTCCTGATTAACAATGGTGGTTACACCAT
TGAAGTTGAGATCCATGATGGACCGTACAATGTGATCAAGAACTGGAACT
ACACCGGGTTGGTTGATGCAATCCACAATGGCGAAGGCAAGTGCTGGACA
ACCAAGGTCTTCTGCGAGGAGGAGCTCATCGAAGCCATTGAGAACGCTAC
TGGACCCAAGAAGGATTGCTTGTGCTTCATTGAAGTACTTGTTCACAAGG
ATGATACAAGCAAAGAGCTTTTGGAATGGGGCTCCAGGGTCTCCGCTGCC
AATAGCCGCCCACCAAATCCTCAGTAGATATGAGGCGGCTCATATTGCAA
ATTGCACTCTACTACCATTTATAGCCAAATTAAATGCGCGCATGTCTTTT
CTGTGGTTACTTTACTAAGTTTTGGGTATTTTGAACTATTTGCTGGTTTC
TAATGTAAATTCATTTTAAAATTTAATATCTACTAAATCCTCTCCATTGC
TTC
back to top