DY257827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRATF (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRAT1 (tRNA-specific 2-thiouridylase mnmA OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=mnmA PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 41/133 (30.83%), Postives = 66/133 (49.62%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + P PW+ +KD++NNV+ + + ++ + L W++G+ P + R KVR+ +C +E +DG N V + + + GQ FY C+G GVI+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKDRPEVPWFAAKKDLENNVLIAVQGHDHPLLFKQSLQAIELSWVAGMAPADKFRCAAKVRYRQKDQSCE--VEVNQDGSVN---VTFDQPQRAITPGQSVVFYIDDVCLGGGVII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_FRAP2 (tRNA-specific 2-thiouridylase mnmA OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 39/133 (29.32%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG------PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVIL 381 G +YTIGQRQGL + G PW+ +KD++NNV+ + + + + L W++G P + R KVR+ C++ + + DG N+ E + + GQ FY C+G G+I+ Sbjct: 232 GLMYYTIGQRQGLGIGGVKNRPEIPWFAAQKDLENNVLIAVQGHDHPMLFKDTLQAIDLSWVAGSAPADSFRCSAKVRYRQKDQPCSVEVNN--DGSVNVV---FDEPQRAITPGQSVVFYDNDVCLGGGIII 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_CHLCV (tRNA-specific 2-thiouridylase mnmA OS=Chlamydophila caviae GN=mnmA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG--PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G +YTIGQR+GL L G P YVV KD++ N+V++ R + L W + PE I+R KVR+ C ++ H ++ E V+ S + + GQ AFY G +C+G GVI Sbjct: 232 GAHYYTIGQRRGLDLGGSEKPCYVVGKDMEKNIVYIVRGEDHPLLYQTELTAKELNWF--VSPESITRCSAKVRYRSEDEECEIL--HSDEDSE--VRVRFSSPVKAITPGQTIAFYDGEKCLGGGVI 353
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA2_GEOKA (tRNA-specific 2-thiouridylase mnmA 2 OS=Geobacillus kaustophilus GN=mnmA2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.987e-11 Identity = 42/130 (32.31%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG--PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G +YTIGQR GL + G PW+VV KDV+ NV++V++ + + + + W+S PE R K R+ + + + + DGG A V + + GQ FY G C+G G I E Sbjct: 235 GVMYYTIGQRHGLGIGGSGEPWFVVGKDVRENVLYVAQGFENEYLYSTSLKAVDVNWVSDRKPEAPFRCTAKFRYRQP--DVGVTVHPLADGG---AEVVFDAPARAVTPGQAVVFYNGEECLGGGTIDE 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_NITMU (tRNA-specific 2-thiouridylase mnmA OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11 Identity = 44/138 (31.88%), Postives = 63/138 (45.65%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILESWDD 396 G +YTIGQRQGL + G PW+V EKDVK NV+ V + + D R L W+SG P K+R+ C++ N ++ ++ +A GQ Y+ C+G GVI + DD Sbjct: 231 GLMYYTIGQRQGLGIGGTRGGDGEPWFVSEKDVKRNVLTVVQGHDHPDLLRPALAATDLTWVSGKMPRCNWVYAAKIRYRQSDAPCSITYLDC-----NKCKIEFAQPQWAVAPGQSVVVYESKVCLGGGVIAATQDD 363
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_LACC3 (tRNA-specific 2-thiouridylase mnmA OS=Lactobacillus casei (strain ATCC 334) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11 Identity = 41/131 (31.30%), Postives = 59/131 (45.04%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG-----PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G +YTIGQRQGL + G PW+VV KD+ N+++V + + + +L W +G P E + + K R+ L H D G A V + + GQ FY G C+G G I Sbjct: 239 GLMYYTIGQRQGLGIGGNSDNSEPWFVVGKDLDKNILYVGQGFDNPALMATSLSASNLNWTTGQAPAEGTHMTAKFRYRQRDTGVTL---HYHDDG--TATVDFDVPVRAITPGQAVVFYDGDECLGGGTI 364
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_SHELP (tRNA-specific 2-thiouridylase mnmA OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 45/136 (33.09%), Postives = 66/136 (48.53%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPG------GPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVG----SLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G ++T+GQR+GL + G PWYVV+KD++ NV+ V + K RL VG L W+ P + +++ K R+ C L E G + I V+ E + GQ A FY G C+G G+I Sbjct: 239 GLMYHTLGQRKGLGIGGMKNSNDDPWYVVDKDLERNVLVVGQG----GKHPRLMSVGFYADQLHWVDRTGPNDGAKITVKTRYRQQDVACTLTYE----GDDRIKVI-FDEPVAAVTPGQSAVFYDGEVCLGGGII 365
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_GEOTN (tRNA-specific 2-thiouridylase mnmA OS=Geobacillus thermodenitrificans (strain NG80-2) GN=mnmA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11 Identity = 42/130 (32.31%), Postives = 63/130 (48.46%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRLPGG--PWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVILE 384 G +YTIGQR GL + G PW+VV KDV+ NV++V++ + + + + W+S PE R K R+ + +M+ + DG A V + + GQ FY G C+G G I E Sbjct: 235 GVMYYTIGQRHGLGIGGSGEPWFVVGKDVRENVLYVAQGFENEYLYSTSLKAVDVNWVSDRKPEAPFRCTAKFRYRQP--DIGVMVHPLADGK---AEVVFDAPARAVTPGQAVVFYNGDECLGGGTIDE 359
BLAST of DY257827 vs. ExPASy Swiss-Prot
Match: MNMA_PSEHT (tRNA-specific 2-thiouridylase mnmA OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mnmA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 39/132 (29.55%), Postives = 63/132 (47.73%), Query Frame = 1 Query: 1 GFWFYTIGQRQGLRL------PGGPWYVVEKDVKNNVVFVSRNYYSFDKKRRLFRVGSLKWLSGLPPEEISRLQCKVRHGPGFYNCNLMIEHVEDGGENIAVVQLSEDDQGLAAGQFAAFYQGTRCIGSGVI 378 G ++T+GQR+GL + G PWYVV+KD++ NV+ V + L W+ + P+ +R K R+ +C L++ G + +A V E + + GQ A FY C+G G+I Sbjct: 235 GLMYHTLGQRKGLLIGGMKEGSGEPWYVVDKDLERNVLIVGQGKDHPRLYSNGLNANQLHWVDRIGPKGTTRCTVKTRYRQEDLSCTLLV-----GEDGMARVLFDEPQKAVTPGQSAVFYAEDVCLGGGII 361 The following BLAST results are available for this feature:
BLAST of DY257827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257827 ID=DY257827; Name=DY257827; organism=Citrus clementina; type=EST; length=716bpback to top |