DY257830

Overview
NameDY257830
Unique NameDY257830
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1120
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.495e-25
Identity = 86/237 (36.29%), Postives = 114/237 (48.10%), Query Frame = 3
Query:  237 FYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVGI--QGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAV-------VKGFQKSQYEMLGGGANMLSKG-YSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIV 917
            F R G AEF  TF      VL   G +   +    VGI   G+A AFG  +  + Y    ISGGH NPAVT GL  + +        Y++ Q +GAI  AA        V GF     +    G    S G YS    L  EIV +   V+ +  ATD +  A        AP+PIG A+ L+HL +IP+T T +NP+RS G AL      A +  W+FW  P  GA + AL +++V
Sbjct:    5 FKRCG-AEFFGTFWL----VLGGCGSAVLAAGVPQVGIGYAGVALAFGLTVLTMAYAVGHISGGHFNPAVTVGLAASGRFGWRDVPPYIVAQVVGAIVAAATLASIAQGVAGFDLVASKFAANGYGDHSPGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVG-GWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.256e-25
Identity = 82/234 (35.04%), Postives = 125/234 (53.42%), Query Frame = 3
Query:  216 GELSSWSFYRAGIAEFVATFLFLYITVLTVM--GVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYH 908
            G+  S +  +A +AEF+AT LF++  V + +  G   +       G+  IA A    +F  V   A  SGGH+NPAVTFGL +   +++ T +FY + Q LGA     +++     +     G    +S G ++ +G+  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    LA  P +G  +NP+RS G A +   D A +  W++W GP IG  LA L +
Sbjct:   10 GDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHG----VSGGTTELEGVVFEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPA-VAAADFAGN--WVYWVGPLIGGGLAGLVY 232          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 4.256e-25
Identity = 78/240 (32.50%), Postives = 121/240 (50.42%), Query Frame = 3
Query:  213 PGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDG-LGA---EIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQI 914
            P E +     +A +AEF++T +F+     + M  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG F+   ++L   + Y I Q LG++    ++K           GG  + + G S G G L A   EIV TF LVYTV++     +N     +  +AP+ IGF V    LA    +G  +NP+ + G A++      W + W++WAGP +G  +A L +++
Sbjct:   11 PDEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTENGATTPSGLVAAAVAHAFGLFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILK--------FATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKN---GSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLVGGGIAGLIYEV 236          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 9.482e-25
Identity = 80/238 (33.61%), Postives = 119/238 (50.00%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKG------DGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIVIRAIP 932
            RA ++EFVAT +F++    +V G+ K      T+G +  +A A    + A V  +   SGGH+NPAVTFG+ + R++S   A  Y   Q LGA+    +++        +  GG  M   G++ G        L  E+V TF LVYTV+ +A D +    D     +APL IG       LA  P  G  +NP+R+ G AL+      W   W++W GP IGA +A   ++ V+   P
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLR--------LASGG--MRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD-----IAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALV---GWNWRHHWVYWLGPLIGAGMAGALYEFVMAEQP 248          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.238e-24
Identity = 71/198 (35.86%), Postives = 103/198 (52.02%), Query Frame = 3
Query:  342 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGF--QKSQYEMLGGGANMLSK----GYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQI 914
            +G  G+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y++ Q LGA+  AA +      K+  E+ G  AN   +    GYS    L  EI+ T   +  +  +T  +       VP+  AP+ IG A+ L+HL +IP+T T +NP+RS G AL      A    W+FW  P +G  + A+  +I
Sbjct:   34 IGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGSTHGR-------VPVGFAPVAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPILGGAIGAVVWKI 223          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.617e-24
Identity = 78/228 (34.21%), Postives = 117/228 (51.32%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIV 917
            RA +AEF++T +F++    + +  +K     +T   G+   A A    +F  V   A ISGGH+NPAVTFG+ L   ++L   + Y I Q LG++  A  +  F      +   G   LS G    + L  EIV TF LVYTV+ +A D K  +    +  +AP+ IGF V    LA    +G  +NP+ + G A++      W + W++WAGP IG  LA + +  V
Sbjct:   22 RAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPSGLVAAALAHAFGLFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSV-AACFLLSFATGGEPIPAFG---LSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVV---SWTWTNHWVYWAGPLIGGGLAGIIYDFV 238          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.617e-24
Identity = 70/199 (35.18%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  342 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVV-------KGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIV 917
            +G  G+A AFG  +  + Y    ISG H+NPAV+ GL+   +        Y++ Q LGAI   AV+        GF  ++     G A     GYS    L  E+V T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NP+RS G AL      A    W+FW  P IGA L A  ++++
Sbjct:   33 IGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG-GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.759e-24
Identity = 80/241 (33.20%), Postives = 123/241 (51.04%), Query Frame = 3
Query:  204 LFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVSKSKSKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQYEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVF-SATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIV 917
            ++ PG L      +A +AEF++T +F++    + M  SK     +T   G+   A A    +F  V   A ISGGH+NPAVTFG F+   ++L   + Y I Q LG+     +++         L  G   L+ G S  + L  EIV TF LVYTV+ +A D K+ +    +  +AP+ IGF V    L      G  +NP+ S G AL+     +W+  W++W GP IG  LA + ++++
Sbjct:   14 VYHPGAL------KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGG----LATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALV---SWSWESQWVYWVGPLIGGGLAGVIYEVL 236          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 4.706e-24
Identity = 80/242 (33.06%), Postives = 118/242 (48.76%), Query Frame = 3
Query:  243 RAGIAEFVATFLFLYI----TVLTVMGVSKSKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQ--------YEMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNA----RDSHVPILAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYNKDQAWDDPWIFWAGPFIGATLAALYHQIVI 920
            RA  AEF +TFLF++I    T+   M      S  S++    +A AFG  +FA V+  A +SGGH+NPAVTF   +   +++ +A+FY   Q LG+     V+      Q         EM G GA +L            E V TF++VYTV  A D +       +      L  L +G       LA   +TG  +NP+RS G A++      + +  ++WAGP +GA +AAL HQ ++
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGIL------------EGVLTFMVVYTVHVAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGH---YSNQAVYWAGPMVGAAVAALVHQALV 242          
BLAST of DY257830 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.027e-24
Identity = 81/250 (32.40%), Postives = 131/250 (52.40%), Query Frame = 3
Query:  228 SWSFYRAGIAEFVATFLFLYITVLTVMGVSK--SKSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTTAVFYMIMQCLGAICGAAVVKGFQKSQY--------EMLGGGANMLSKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPSRSLGAALIYN--KDQAWDDPWIFWAGPFIGATLAALYHQIVIRAIPIQ 938
            S +  R  ++EF++TF F+   V +VM   K  +       G+   A A    + + VY +  +SGGH+NPAVTF + +A ++S+ TA+FY   Q + ++    V+K     Q+        EM G GA++L            E V  FVLVYTVF+A+D +R      +P+ + P+ IGF      LA  P +G  +NP+ + G+A++Y   K+QA     ++W GP +G   AAL +  V+  +P++
Sbjct:   18 SMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVL------------EGVLAFVLVYTVFTASDPRRG-----LPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSFKNQA-----VYWVGPLLGGATAALVYDNVV--VPVE 243          
The following BLAST results are available for this feature:
BLAST of DY257830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
AQPZ_BORBR2.495e-2536.29Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIP22_MAIZE4.256e-2535.04Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
TIP11_ARATH4.256e-2532.50Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP32_ORYSJ9.482e-2533.61Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPZ1_AGRT51.238e-2435.86Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
TIP12_ARATH1.617e-2434.21Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQPZ_CHRVO1.617e-2435.18Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP11_ORYSJ2.759e-2433.20Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP51_ORYSJ4.706e-2433.06Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
TIP51_ARATH8.027e-2432.40Probable aquaporin TIP5-1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB1CH07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257830 ID=DY257830; Name=DY257830; organism=Citrus clementina; type=EST; length=1120bp
GGAGCCCGTTGTGCCATTTATTTATTCTATTCACTCCCAAGAAACTTGAA
CCTATCTTGTCTATTAATTTTCACAAGAACATAATGGAGGGCAAAGAAGA
GGATGTAAGAGTGGGAGCAAATAGGTATCGAGAGAGTCAACCTATTGGAA
CCGCGGCTCAAACTCAGGATGTGAAGGATTACACGGAGCCACCTCCGGCG
CCGCTCTTCGAGCCCGGCGAATTATCGTCGTGGTCCTTTTACAGGGCTGG
CATTGCGGAGTTTGTGGCCACGTTCTTGTTTCTTTACATCACTGTTCTAA
CAGTGATGGGCGTGTCCAAATCCAAAAGCAAATGTTCCACTGTGGGAATC
CAGGGCATCGCTTGGGCTTTTGGCGGCATGATCTTCGCTCTAGTCTACTG
CACTGCTGGCATTTCAGGGGGTCACATTAACCCAGCGGTGACATTCGGGC
TGTTCTTGGCCCGAAAGCTGTCGCTTACCACGGCAGTTTTTTACATGATA
ATGCAGTGTTTAGGGGCCATATGCGGTGCCGCCGTTGTAAAGGGCTTTCA
GAAAAGCCAATATGAAATGCTAGGCGGCGGTGCCAACATGCTCAGCAAAG
GCTACAGCAAGGGAGATGGCCTTGGAGCCGAGATTGTTGGTACCTTTGTT
CTTGTTTACACTGTCTTCTCGGCCACTGATGCCAAGCGCAATGCCCGCGA
TTCTCATGTTCCTATATTGGCACCCCTGCCCATAGGATTTGCTGTGTTTT
TGGTGCACTTGGCAACAATTCCTATCACAGGAACAGGCATTAACCCATCT
AGGAGTCTTGGCGCAGCTCTGATATACAACAAGGACCAAGCCTGGGATGA
TCCTTGGATTTTCTGGGCAGGACCATTCATTGGAGCAACGCTTGCCGCTT
TATATCATCAAATTGTGATCAGGGCCATCCCAATTCAGTCCAAATGGATA
GTCATTAATTTCAATCCGTTCAATTAAAACCCCTGTATGGAAGTTAAATT
GCCCCCTGTCCCGGGGGTTTGCTTTTAATTTTTCCCCGGGATAGGGACCA
CCCTTTTGGGGGTTTGGGCCTTTTAAATTGTGGTTGAGACCTTCCATGTT
TCAGGGGCCCATTTCCCTTT
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