DY257890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_KORCO (50S ribosomal protein L2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.423e-12 Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 1 Query: 25 WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 WP VRGVAMNPV HPHGGG+H+ G +TV R APPGQKVG I Sbjct: 187 WPVVRGVAMNPVSHPHGGGSHKRPGKPTTVARTAPPGQKVGHI 229
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_THEVO (50S ribosomal protein L2P OS=Thermoplasma volcanium GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 34 VRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 147 VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 184 VRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 34 VRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 147 VRGVAMN V HPHGGGNHQH+G STV R+APPG+KVG Sbjct: 184 VRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVG 221
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_HYPBU (50S ribosomal protein L2P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl2p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.471e-12 Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K+ K + WP+VRGVAMN V HPHGGG+HQ +TV R+APPG+KVG I Sbjct: 178 KWSAKPHVWPRVRGVAMNAVNHPHGGGSHQSPSFPTTVSRNAPPGRKVGHI 228
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METVS (50S ribosomal protein L2P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl2p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG I Sbjct: 186 KAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METVA (50S ribosomal protein L2P OS=Methanococcus vannielii GN=rpl2p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQH+G S+V R+ PG+KVG I Sbjct: 186 KAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRNTSPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METMP (50S ribosomal protein L2P OS=Methanococcus maripaludis GN=rpl2p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.626e-12 Identity = 31/47 (65.96%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQHIG S+V R PG+KVG I Sbjct: 186 KAVAWPKVRGVAMNAVDHPYGGGRHQHIGKPSSVSRHTSPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METM7 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl2p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG I Sbjct: 186 KAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METM6 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl2p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG I Sbjct: 186 KAIAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METM5 (50S ribosomal protein L2P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl2p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.301e-11 Identity = 30/47 (63.83%), Postives = 35/47 (74.47%), Query Frame = 1 Query: 13 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K WPKVRGVAMN V+HP+GGG HQH+G S+V R PG+KVG I Sbjct: 186 KAVAWPKVRGVAMNAVDHPYGGGRHQHLGKPSSVSRHTSPGRKVGHI 232 The following BLAST results are available for this feature:
BLAST of DY257890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257890 ID=DY257890; Name=DY257890; organism=Citrus clementina; type=EST; length=438bpback to top |