DY257890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METTP (50S ribosomal protein L2P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rpl2p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.699e-11 Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K+R K WP+VRGVAMN V+HP GGG QH G TV R PPG+KVG I Sbjct: 178 KYRSKAVKWPRVRGVAMNAVDHPFGGGGRQHPGRPKTVSRGTPPGRKVGSI 228
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 29/38 (76.32%), Postives = 31/38 (81.58%), Query Frame = 1 Query: 34 VRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 147 VRGVAMN V HPHGGGNHQH+G STV R PPG+KVG Sbjct: 184 VRGVAMNAVNHPHGGGNHQHVGRPSTVGRGTPPGRKVG 221
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_CENSY (50S ribosomal protein L2P OS=Cenarchaeum symbiosum GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.219e-11 Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 +FR K +P VRGVA HPHGGG HQH+G +STV R+APPG KVG I Sbjct: 179 RFRSKGRKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKVGSI 229
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METKA (50S ribosomal protein L2P OS=Methanopyrus kandleri GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.898e-11 Identity = 31/49 (63.27%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 7 RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 R K WPKVRGVAMN V+HP GGGNHQ G +T+ R PPG+KVG I Sbjct: 184 RSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_NITMS (50S ribosomal protein L2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11 Identity = 30/50 (60.00%), Postives = 34/50 (68.00%), Query Frame = 1 Query: 4 FRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 F+ K +P VRGVA HPHGGG HQH+G +STV RD PPG KVG I Sbjct: 181 FKAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSI 230
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_HALWD (50S ribosomal protein L2P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl2p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.785e-11 Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 147 K + + WP+VRGVAMN V+HP GGG QH G +V RDAPPG+KVG Sbjct: 179 KMKARGIKWPRVRGVAMNAVDHPFGGGGRQHPGQPKSVSRDAPPGRKVG 227
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11 Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLI 153 K + + + +P+VRGVAMNPVEH HGGGNHQH+G +TV ++D QK+GL+ Sbjct: 174 KAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLV 225
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METS3 (50S ribosomal protein L2P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl2p PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 1 Query: 4 FRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 ++ K + VRGVAMN V+HPHGGGN QH G +TV R APPG+KVG I Sbjct: 183 YKAKGKKFMTVRGVAMNAVDHPHGGGNRQHPGRPTTVSRHAPPGRKVGSI 232
BLAST of DY257890 vs. ExPASy Swiss-Prot
Match: RL2_METLZ (50S ribosomal protein L2P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl2p PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11 Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 1 Query: 1 KFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 153 K + WP+VRGVAMN ++HP GGG HQH G TV R A PG+KVG + Sbjct: 181 KMKTSATRWPRVRGVAMNVIDHPFGGGGHQHPGKPKTVARGASPGRKVGSV 231 The following BLAST results are available for this feature:
BLAST of DY257890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257890 ID=DY257890; Name=DY257890; organism=Citrus clementina; type=EST; length=438bpback to top |