DY257952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: CSHA_BACLD (DEAD-box ATP-dependent RNA helicase cshA OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=cshA PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.301e-51 Identity = 109/293 (37.20%), Postives = 170/293 (58.02%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINL-MDELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 A+ GTGKTAAF IP +EKI+ ++ IQ +++ PTRELA+Q S+ ++G+ +V+ GG + I L + H++VGTPGR+LD + L+ + +V+DEAD++L+ F +E ++ +PA Q L+FSAT P +K ++++ P + + E+T+ I Q+Y V ER+K L L +I+F + RV+ L + + GY+ IH + Q R F+ GA LV TD+ RG+DI V V NFD P++PE+Y+HR+GR+GR G G Sbjct: 47 AQTGTGKTAAFGIPLVEKINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTG 339
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: UAP56_CAEEL (Spliceosome RNA helicase BAT1 homolog OS=Caenorhabditis elegans GN=hel-1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 1.699e-51 Identity = 113/297 (38.05%), Postives = 178/297 (59.93%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDDIMRLYQPV-HLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F I L++++ + + VV + TRELA Q S+ + K+L ++V V GG ++K D RL H++VGTPGR+L L++ G L V+DE DK++ + + V+++++ P +Q++MFSAT P ++ +++Q P + + DE LTL G+ Q+Y ++E +K L L L+ NQ +IF +V R E L + +TE + IH +M Q+ R + F++ R LV TDLF RG+DI+ VN+V N+D P++ ++YLHRV R+GRFG G Sbjct: 85 AKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKG 381
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DBPA_BACSU (ATP-dependent RNA helicase dbpA OS=Bacillus subtilis GN=dbpA PE=1 SV=2) HSP 1 Score: 203.756 bits (517), Expect = 1.699e-51 Identity = 113/293 (38.57%), Postives = 164/293 (55.97%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE-LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 ++ G+GKTA+F IP E + D N Q +IL PTRELA+Q + +G+ I+ G +S L Q H++VGTPGR+LD +KG L S LV+DEAD++L+ F VE +I+ LP R ++FSAT P ++ +Y+Q P I + LT + I V E K L + + IIFC + V L ++ +LGY C IH M+Q+ R V ++F+ G R LV TD+ RGIDI+ +++VIN+D P E+Y+HR GR+GR G+ G Sbjct: 46 SQTGSGKTASFGIPLCELANWDENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGTPGRVLDHIEKGTLPLDRLSYLVIDEADEMLNMGFIEQVEAIIKHLPTERTTMLFSATLPQDIEKLSRQYMQNPEHIEVKAAGLTTRNIEHAVIQVREENKFSLLKDVLMTENPDSCIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRGEYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKG 338
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 4.944e-51 Identity = 118/298 (39.60%), Postives = 178/298 (59.73%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKD--DIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + +L++ID + ++L TRELA Q + K+L ++V V GG +K D+++ P H++VGTPGRIL L+++ LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ K++Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TDL RGIDI+ VN+VIN+D P + ++YLHRVGR+GRFG G Sbjct: 95 AKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP-HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKG 391
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.944e-51 Identity = 118/298 (39.60%), Postives = 178/298 (59.73%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKD--DIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + +L++ID + ++L TRELA Q + K+L ++V V GG +K D+++ P H++VGTPGRIL L+++ LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ K++Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TDL RGIDI+ VN+VIN+D P + ++YLHRVGR+GRFG G Sbjct: 95 AKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP-HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKG 391
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH15_ARATH (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=2 SV=2) HSP 1 Score: 200.29 bits (508), Expect = 1.879e-50 Identity = 116/298 (38.93%), Postives = 175/298 (58.72%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + L++I+ + ++L TRELA Q +L + +V V GG ++K D+++ P H++VGTPGR+L L+++ LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ K++Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P + +TYLHRVGR+GRFG G Sbjct: 90 AKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKTRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 4.186e-50 Identity = 116/298 (38.93%), Postives = 175/298 (58.72%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLL-SPEFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + L++I+ + ++L TRELA Q +L + +V V GG ++K D+++ P H++VGTPGR+L L+++ LK+ ++DE DK+L S + + V+++ + P ++Q++MFSAT ++ K++Q P I + DE LTL G+ Q+Y + E +K LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P + +TYLHRVGR+GRFG G Sbjct: 90 AKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECP-HIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKG 386
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX39_RAT (ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.186e-50 Identity = 114/298 (38.26%), Postives = 178/298 (59.73%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + L++I+ N + V+++ TRELA Q S+ + K++ +++V V GG S+K +D+++ P H++VGTPGRIL L + L++ V+DE DK+L + + V+++ R P +Q +MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+D P++ +TYLHRV R+GRFG G Sbjct: 88 AKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCP-HVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 384
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX39_MOUSE (ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 4.186e-50 Identity = 114/298 (38.26%), Postives = 178/298 (59.73%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLK--DDIMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + L++I+ N + V+++ TRELA Q S+ + K++ +++V V GG S+K +D+++ P H++VGTPGRIL L + L++ V+DE DK+L + + V+++ R P +Q +MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L+ NQ +IF SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+D P++ +TYLHRV R+GRFG G Sbjct: 88 AKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCP-HVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 384
BLAST of DY257952 vs. ExPASy Swiss-Prot
Match: DDX39_HUMAN (ATP-dependent RNA helicase DDX39 OS=Homo sapiens GN=DDX39 PE=1 SV=2) HSP 1 Score: 199.134 bits (505), Expect = 4.186e-50 Identity = 116/298 (38.93%), Postives = 177/298 (59.40%), Query Frame = 3 Query: 3 AKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHL-NIQVMVTTGGTSLKDD--IMRLYQPVHLLVGTPGRILDLSKKGVCILKDCSMLVMDEADKLLSP-EFQPSVEQLIRFLPANRQILMFSATFPVTVKDFKDKYLQKPYVINLMDE--LTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNPETYLHRVGRSGRFGHLG 878 AK+G GKTA F + L++I+ N + V+++ TRELA Q S+ + K++ +++V V GG S+K D +++ P H++VGTPGRIL L + LK+ V+DE DK+L + + V+++ R P +Q +MFSAT ++ K++Q P + + DE LTL G+ QYY +++ +K L L L+ NQ IIF SV R LA+ + E + IH M Q+ R + F++ R LV T+LF RG+DI+ VN+V N+D P++ +TYLHRV R+GRFG G Sbjct: 88 AKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCP-HVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKG 384 The following BLAST results are available for this feature:
BLAST of DY257952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257952 ID=DY257952; Name=DY257952; organism=Citrus clementina; type=EST; length=1192bpback to top |