DY258031

Overview
NameDY258031
Unique NameDY258031
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1285
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.233e-11
Identity = 56/228 (24.56%), Postives = 96/228 (42.11%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGL-RVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 772
            EV V++ ++ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T+L  G +V +      C +C +C+      C   +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A +N    P                  + A   G  R+I ID   ++ +    +G  +FV+ +DH  P + + A
Sbjct:   36 EVRVKILFTSLCHTDVYFWEAKGQTPVFPR---IFGHEAGGIVESVGEG-VTDLAPGDHV-LPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLA 258          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 56/222 (25.23%), Postives = 92/222 (41.44%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T L  G +V +      C DC +C+      C   +             S ++++G          TF +Y V +   +  I    PL++   + C   T   A LN +K + G                     A   R+I +D    K +    +G   FV+ +DH+ P
Sbjct:   36 EVRVKILYTALCHTDVYFWEAKGQTPVFPR---ILGHEAGGIVESVGEG-VTELVPGDHV-LPVFTGECKDCAHCKSEESNLCDLLRINVDRGVMIGDGQSRFTINGKPIFHFVGTSTFSEYTVIHVGCLAKINPEAPLDKVCVLSCGLSTGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKP 252          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 56/221 (25.34%), Postives = 92/221 (41.63%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLN-SKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSD 751
            EV +++ ++ +CHTD++ W  KG  P  PR   + GHE  G + ++G+G +T+LK G +V +      C  C +C+      C   +             + +S DG          TF +Y V ++  VT I    PL++   + C   T   A LN +K   G                     A   R+I +D    +      +G  +FV+ +DH D
Sbjct:   38 EVRLKILFTSLCHTDVYFWEAKGQTPLFPR---IFGHEAGGIVESVGEG-VTDLKPGDHV-LPVFTGECQQCRHCKSEESNMCDLLRINTDRGVMIHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGATLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVNPKDHGD 253          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 56/228 (24.56%), Postives = 96/228 (42.11%), Query Frame = 2
Query:  164 EVLVRVDYSGVCHTDLHAW--KGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQAQC------------SGYSVDG----------TFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGL-RVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKA 772
            EV V++ Y+ +CHTD++ W  KG  P  PR   + GHE  G I ++G+G +T++  G +V +      C +C +C+      C   +             S +S++G          TF +Y V +   V  I    PL++   + C   T   A +N    P                  + A   G  R+I +D    + +    +G  +FV+ +DH+ P + + A
Sbjct:   36 EVRVKILYTSLCHTDVYFWEAKGQTPVFPR---IFGHEAGGIIESVGEG-VTDVAPGDHV-LPVFTGECKECPHCKSAESNMCDLLRINTVRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVNPKDHNKPVQEVLA 258          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_NAJNA (Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 61/222 (27.48%), Postives = 88/222 (39.64%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATC----------------SQAQCSGYSVD-----GTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVY-RALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            K  EV +++  +GVC +D H   G +  +  LP+V GHE AG + ++G+G +T +K G  V I   A  C  C  C+      C                S+  C G S+       TF +Y V +   V  I    PLE+   I C   T Y  A+  +K  PG                    AA   R+I +D   DK       GA + ++  D   P
Sbjct:   32 KAHEVRIKILATGVCRSDEHVISGAF--RMPLPMVLGHEAAGVVESVGEG-VTCVKPGDKV-IPLFAPQCGKCRACQSPKGNLCTSNDLNSGSGLMPDGTSRFTCKGKSIHHFISTSTFTEYTVVHENSVVKIDPSAPLEKVCLIGCGFSTGYGAAMQTAKVEPGSICAVFGLGGVGLSVVMGCKAAGASRIIGVDINKDKFAKAKEMGATECINPLDFKKP 249          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 64/234 (27.35%), Postives = 97/234 (41.45%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQA----------------QCSGYSV-----DGTFQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVY-RALLNSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDPEKFIKAIKDMCD 790
            K  EV +++  +GVC +D H   G       LP V GHEGAG + ++G+G +T +K G  V I   +  C +C  C+      CS++                 C G  +       TF QY V     V  I    PL++   I C   T Y  A+  +K  PG                    AA   R+IA+D   DK       GA + ++ +D+S P +  + +++M D
Sbjct:   33 KAHEVRIKMVATGVCRSDDHVVSGTLVTP--LPAVLGHEGAGIVESVGEG-VTCVKPGDKV-IPLFSPQCGECRICKHPESNFCSRSDLLMPRGTLREGTSRFSCKGKQIHNFISTSTFSQYTVVDDIAVAKIDGASPLDKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYSKPIQ--EVLQEMTD 260          
BLAST of DY258031 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 9.446e-11
Identity = 61/222 (27.48%), Postives = 89/222 (40.09%), Query Frame = 2
Query:  155 KPGEVLVRVDYSGVCHTDLHAWKGDWPAKPRLPLVGGHEGAGPIVAIGDGTLTNLKVGQNVGIKWLADSCLDCENCREGIEATCSQ---AQCSGYSVDGT------------------FQQYAVSYARHVTPIPDGLPLEQAAPILCAGVTVYRALL-NSKARPGQYXXXXXXXXXXXXXXXQYAAAMGLRVIAIDTGDDKRKLCASYGADKFVDFEDHSDP 754
            K  EV +++  +G+C +D H   G +  K  LP+V GHE AG + ++G+G +T +K G  V I      C  C +CR      C+    +  +G   DGT                  F +Y V +   V  I    PLE+   I C   T Y A +  +K  PG                    AA   R+I +D   DK       GA + V+  D+  P
Sbjct:   32 KAHEVRIKILATGICRSDDHVISGAF--KMPLPMVLGHEAAGVVESVGEG-VTCVKPGDKV-IPLFVPQCGKCSSCRSTRGNLCTSNDLSAATGLMPDGTSRFTCKGKSLHHFISTSSFTEYTVVHENSVVKIDAAAPLEKVCLIGCGFSTGYGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKP 249          
The following BLAST results are available for this feature:
BLAST of DY258031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 197
Match NameE-valueIdentityDescription
ADH1_ORYSI7.233e-1124.56Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH3_HORVU9.446e-1125.23Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_PETHY9.446e-1125.34Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_PENAM9.446e-1124.56Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_NAJNA9.446e-1127.48Alcohol dehydrogenase 1 OS=Naja naja PE=1 SV=1[more]
ADH1_MOUSE9.446e-1127.35Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1A_UROHA9.446e-1127.48Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2CH02ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258031 ID=DY258031; Name=DY258031; organism=Citrus clementina; type=EST; length=1285bp
GACTCTCTCTTTCTCTCTTCACAACTCTACAGCAATCAAAACTATGTCAC
AAACCCTCGATTACCCCAAGACCGGCGCAGCCTGCGTCTTCAAAGACCAC
AATGCCAACATTGATTTCGTCAAGGATCACCCAGTCCCCCAACAGGCTGA
CCTCAAGCCTGGAGAGGTCCTCGTTCGTGTCGACTACTCTGGTGTATGCC
ACACCGATCTTCACGCTTGGAAAGGTGACTGGCCGGCGAAGCCTCGTCTA
CCCCTCGTAGGTGGTCATGAGGGTGCAGGTCCAATCGTGGCCATCGGAGA
CGGTACATTGACTAACCTCAAAGTTGGTCAAAACGTCGGAATCAAATGGC
TCGCCGACTCGTGTCTCGACTGCGAGAACTGTCGTGAAGGTATCGAGGCT
ACATGTTCTCAGGCTCAATGCTCCGGATACTCTGTCGACGGTACTTTCCA
ACAATACGCAGTATCTTACGCTCGTCACGTCACCCCTATTCCCGACGGAT
TACCCTTGGAACAAGCCGCTCCTATCTTGTGCGCTGGAGTTACTGTCTAT
CGTGCTCTCTTGAACTCGAAAGCGAGACCTGGACAATATGTCGCCATTGT
GGGTGCTGGAGGAGGTCTAGGACATCTAGCTGTGCAATACGCTGCCGCCA
TGGGACTTCGAGTCATCGCCATCGACACTGGTGACGACAAGAGGAAACTT
TGTGCCTCATACGGTGCCGACAAATTCGTCGATTTCGAGGATCACTCGGA
TCCCGAGAAGTTTATCAAAGCGATCAAGGATATGTGCGATGGCGTAGGAC
CTCACGCTGCTGTAGTTGCGGCAGCTGGTGCCGCCGCTTACGAGCAGGCT
CTCGAGTAATTCGTCCAACCGGTACTCTCGTTGCCGTCGGGTCTCCCCCC
AACACTTCCATAAAGGCCAACGTCTTCTTCCCCGTCTTCTACTCCAAGCG
CAAATCGGGGCCTAACTTGGGAACAGGCAAGATGCCCGTGGAAGCTCCCA
ATTTCCCTGCCCCGGAAAAGGTACCCCCCCCAAATCGAGTTTTGCCCCCT
TGGAAAATTTTTCCCGAAATTTTAAAAACCCCAGGGGAAAAAGGGGCAAA
ATCCCCCGGGGAGAATTTTTTTCCCAAAAAATTTTAAAACCCTTCTCCCC
CCCCCTCCCCCCCCTCCCCCCCCCCTCTTCCCCCCTTTTTTGGGGTTTTT
AACCTTTTTCCCCCCCGGGGGCCCCCCCCTTTCCCGGGGGGCTCGGGGGG
GGGGGCCCCCCCGAGGAAAAAGGAGGGGGGAGAAA
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