DY258098

Overview
NameDY258098
Unique NameDY258098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1343
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: YEAA_SCHPO (Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Schizosaccharomyces pombe GN=SPACUNK4.10 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.711e-15
Identity = 65/205 (31.71%), Postives = 98/205 (47.80%), Query Frame = 1
Query:  310 MKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGV---PTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESG 915
            +K I   G G E VD+ A T  GI+V+ +P  V     + A++ I+LMLG LR  N+    + +        P+ +   GKT+ ILG G IG  +AKR R F +KI+   R+     +      A   +    DDL+             + +DV+   L LN  T  I+ K     MK+G ++VN ARG ++D  A+   L+ G
Sbjct:   81 VKFICHLGAGYETVDVAACTARGIQVSHVPKAVDD---ATADVGIFLMLGALRGFNQGIFELHKNNWNANCKPSHDPE-GKTLGILGLGGIGKTMAKRARAFDMKIVYHNRTPLPEEE------AEGAEFVSFDDLL-------------AKSDVLSLNLPLNAHTRHIIGKPEFQKMKRGIVIVNTARGAVMDEAALVEALDEG 262          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 6.711e-15
Identity = 62/217 (28.57%), Postives = 102/217 (47.00%), Query Frame = 1
Query:  292 ISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP-TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGC--HEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            I +A  ++L++  G+G + +D+ AA   G+ VA + G  T + A    + I ++L       +  +  E    G+      L GKTV  +G G IG  L +RL+PF   ++        H ++            I  +L  E G    ED+       DV+V    L ++T G+ NK  ++ MKKG ++VN ARG ++D +A+A    SG +   G
Sbjct:  106 IKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFNCNLLY-------HDRLK-----------IDPELEKEIGAKYEEDLDAMLPKCDVIVINTPLTEKTRGMFNKERIAKMKKGVIIVNNARGAIMDTQAVADACSSGQVAGYG 304          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: GRHPR_MOUSE (Glyoxylate reductase/hydroxypyruvate reductase OS=Mus musculus GN=Grhpr PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.495e-14
Identity = 78/289 (26.99%), Postives = 127/289 (43.94%), Query Frame = 1
Query:  205 DVIPISDAPDVIANYH--LCVVKTMRLDSNVISRAN-QMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--------GETLLGKTVFILGFGNIGVELAKRLRPFGV-KIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLGH*CCLDRPL*SP*PHSKVQECFNQPQ-GWKCYQT 1032
            D IP  D    +   H  LC +   R+D  ++  A   +++I    VG++ + ++   + GI+V   PG +T    + AEL + L+L   R+  E   AIE+ K G  +        G  L   TV I+G G IG  +A+RL+PFGV + + T R          Q+  + +                   + A+ +D +V   SL   T G+ +K F   MK  ++ +NI+RG +++ E +   L SG +   G       PL    P   ++ C   P  G   Y+T
Sbjct:   38 DPIPRKDLEQGVVGAHGLLCRLSD-RVDKKLLDAAGANLRVISTLSVGVDHLALDEIKKRGIRVGYTPGVLTD---ATAELAVSLLLTTCRRLPE---AIEEVKNGGWSSWSPLWMCGYGLSQSTVGIVGLGRIGQAIARRLKPFGVQRFLYTGRQPRPQEAAEFQAEFVPIA------------------QLAAESDFIVVSCSLTPDTMGLCSKDFFQKMKNTAIFINISRGDVVNQEDLYQALASGQIAAAGLDVTTPEPLPPSHPLLTLKNCVILPHIGSATYKT 301          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: GRHPR_HUMAN (Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens GN=GRHPR PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.495e-14
Identity = 74/278 (26.62%), Postives = 123/278 (44.24%), Query Frame = 1
Query:  211 IPISDAPDVIANYH--LCVVKTMRLDSNVISRAN-QMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--------GETLLGKTVFILGFGNIGVELAKRLRPFGV-KIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLGH*CCLDRPL*SP*PHSKVQECFNQP 1008
            IP  +    +A  H  LC++    +D  ++  A   +K+I    VG++ + ++   + GI+V   P  +T   A   EL + L+L   R+  E   AIE+ K G  T        G  L   TV I+G G IG  +A+RL+PFGV + + T R          Q+  ++                    + A+ +D +V   SL   T G+ NK F   MK+ ++ +NI+RG +++ + +   L SG +   G       PL +  P   ++ C   P
Sbjct:   40 IPAKELERGVAGAHGLLCLLSD-HVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTA---ELAVSLLLTTCRRLPE---AIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTP------------------ELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILP 292          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: SERA_METTH (D-3-phosphoglycerate dehydrogenase OS=Methanobacterium thermoautotrophicum GN=serA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.550e-14
Identity = 64/239 (26.78%), Postives = 112/239 (46.86%), Query Frame = 1
Query:  232 DVIANYHLCVVKTM-RLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--GETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHE------DIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            D I ++   VV++  ++   VI  A ++K+I + GVG++ VD+ AAT  GI V   P      + + AE +I LML L RK      ++++ K       G  L GKT+ I+G G IG ++  R + FG+ I+                        + D  + ++   E      D+      +D+V   + L  +T  ++++     MK  + +VN ARGG++D +A+   L+ G +
Sbjct:   39 DAIKDFDAIVVRSRTKVTREVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAP---ESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIGSQVVVRTKAFGMDIM------------------------VYDPYISKEAAEEMGVTVTDLETLLRESDIVTIHVPLTPETRHLISEDEFKLMKDTAFIVNCARGGIIDEDALYRALKDGEI 250          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: YN14_YEAST (Putative 2-hydroxyacid dehydrogenase YNL274C OS=Saccharomyces cerevisiae GN=YNL274C PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 9.691e-14
Identity = 70/242 (28.93%), Postives = 110/242 (45.45%), Query Frame = 1
Query:  235 VIANYHLCVVKTMRLDSNV-ISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQN-EMRMAIEQK------KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFK-FASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            VI      V  T R D  + ++  + +  +   G G + +D+    +  I+VA +P D+  NA   A+  ++L+LG LR      R  IE          G P G    GKTV ILG G IG  + +RL+PFG +      ++  H++    S              +E GC    F+ F   +D+V   + LN  T  ++N   +  MK G ++VN ARG ++D +A+   L SG +   G
Sbjct:   57 VITRTARSVKNTGRFDEELALALPSSVVAVCHTGAGYDQIDVEPFKKRHIQVANVP-DLVSNAT--ADTHVFLLLGALRNFGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGILGLGRIGRCILERLKPFGFE------NFIYHNRHQLPSE-------------EEHGCEYVGFEEFLKRSDIVSVNVPLNHNTHHLINAETIEKMKDGVVIVNTARGAVIDEQAMTDALRSGKIRSAG 276          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 9.691e-14
Identity = 72/254 (28.35%), Postives = 111/254 (43.70%), Query Frame = 1
Query:  190 PSIQVDVIPISDAPDVIANYHLCVVKTMRLDSNVISRANQ-MKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLG-----VPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            P I +D + I  A  V A   L +    +    VI R  + +K I  + +G + +D++A    GIKV   P  VT    + AE+ + L+LG  R+  E    I  +           GE L  KT+ I GFG+IG  LAKR + F + I       AS S                D+   +   H+ +    S++           +T    NK+ + S+ +G+++VN ARG L+D E +   LE+G L   G
Sbjct:   33 PKITIDEM-IETAKSVDA---LLITLNEKCRKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVT---VATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS----------------DEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAG 263          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP2_RAT (C-terminal-binding protein 2 OS=Rattus norvegicus GN=Ctbp2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 6.282e-13
Identity = 59/225 (26.22%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYL----MLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + VDI AA   GI V  IP    + T ++  C  L +Y     +   LR+   ++ ++EQ +        + G+T+ ++GFG  G  +A R + FG  +I     +  + Q   + S    +   + DL+ +  C            V + C +LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHILNLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIF----YDPYLQDGIERSLGVQRVYTLQDLLYQSDC------------VSLHC-NLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRI 290          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP2_MOUSE (C-terminal-binding protein 2 OS=Mus musculus GN=Ctbp2 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 6.282e-13
Identity = 59/225 (26.22%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYL----MLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + VDI AA   GI V  IP    + T ++  C  L +Y     +   LR+   ++ ++EQ +        + G+T+ ++GFG  G  +A R + FG  +I     +  + Q   + S    +   + DL+ +  C            V + C +LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHILNLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIF----YDPYLQDGIERSLGVQRVYTLQDLLYQSDC------------VSLHC-NLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRI 290          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP2_HUMAN (C-terminal-binding protein 2 OS=Homo sapiens GN=CTBP2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.282e-13
Identity = 59/225 (26.22%), Postives = 108/225 (48.00%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYL----MLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + VDI AA   GI V  IP    + T ++  C  L +Y     +   LR+   ++ ++EQ +        + G+T+ ++GFG  G  +A R + FG  +I     +  + Q   + S    +   + DL+ +  C            V + C +LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIF----YDPYLQDGIERSLGVQRVYTLQDLLYQSDC------------VSLHC-NLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRI 290          
The following BLAST results are available for this feature:
BLAST of DY258098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
YEAA_SCHPO6.711e-1531.71Putative 2-hydroxyacid dehydrogenase UNK4.10 OS=Sc... [more]
FDH1_ORYSJ6.711e-1528.57Formate dehydrogenase 1, mitochondrial OS=Oryza sa... [more]
GRHPR_MOUSE1.495e-1426.99Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]
GRHPR_HUMAN1.495e-1426.62Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]
SERA_METTH2.550e-1426.78D-3-phosphoglycerate dehydrogenase OS=Methanobacte... [more]
YN14_YEAST9.691e-1428.93Putative 2-hydroxyacid dehydrogenase YNL274C OS=Sa... [more]
DHGY_HYPME9.691e-1428.35Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]
CTBP2_RAT6.282e-1326.22C-terminal-binding protein 2 OS=Rattus norvegicus ... [more]
CTBP2_MOUSE6.282e-1326.22C-terminal-binding protein 2 OS=Mus musculus GN=Ct... [more]
CTBP2_HUMAN6.282e-1326.22C-terminal-binding protein 2 OS=Homo sapiens GN=CT... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AA08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258098 ID=DY258098; Name=DY258098; organism=Citrus clementina; type=EST; length=1343bp
GGGAAAAGGCCTCTGGATTTATTCAATATCTGCAGTCTCTTCAGTTCACA
AGGGTAACTGGGCGGATTTGATATAAGCAAAATGGAGGGAATGGCTAGGA
GCAGTGATAAAAACATCACCCGTGTTCTCTTTTGCGGTCCACATTTCCCT
GCTTCCCATAATTATACTAAAGAATACTTGCAAAATTACCCTTCCATTCA
GGTTGATGTGATCCCCATTAGTGATGCGCCTGATGTCATAGCAAACTACC
ATCTTTGTGTGGTAAAAACCATGCGGCTAGATTCAAATGTTATATCTCGT
GCGAATCAAATGAAGCTTATAATGCAGTTTGGGGTTGGCCTGGAAGGTGT
GGATATTAATGCTGCTACAAGATGCGGCATCAAAGTTGCTAGAATCCCAG
GTGACGTGACTGGAAATGCTGCATCGTGTGCTGAATTGACCATATATCTA
ATGCTGGGCCTTCTCAGAAAGCAGAATGAGATGAGAATGGCCATAGAGCA
AAAAAAACTTGGAGTGCCAACTGGTGAGACACTACTTGGGAAAACTGTAT
TTATCTTGGGCTTTGGAAATATTGGGGTTGAATTGGCAAAGCGCTTGCGA
CCATTTGGTGTGAAAATTATTGCCACAAAAAGGAGTTGGGCTTCTCATTC
TCAAGTTTCTTGCCAATCTAGTGCACTTGCAGTAAAAAACGGGATCATTG
ATGATTTGGTTGATGAGAAGGGTTGTCATGAAGATATTTTTAAGTTTGCT
AGCATGGCCGACGTGGTTGTTTGTTGCCTGAGTTTAAATAAGCAGACGGC
TGGCATTGTAAACAAGTCATTTCTATCTTCAATGAAAAAGGGTTCTCTTC
TGGTGAATATTGCTCGAGGAGGTCTTTTAGACTATGAGGCCATTGCTCAT
TACCTCGAATCTGGCCACTTGGGGAGGCTGGGGCATTGATGTTGCTTGGA
CAGACCCCTTTGATCCCCATGACCCCATTCTAAAGTTCAAGAATGTTTTA
ATCAACCTCAAGGTTGGAAGTGTTACCAAACATTCTTACAAATCAAGGGG
CTAAGGTTGGTTGGCCAACGTTGCCCCTCAACTTTCAGGCGGGGGACTCC
TTTGAAAAGGAACTAAAATTTGGGGAATTGAATCCACCCTTCAAAGGAAC
TCTGTTTCCATCCGGCCCAAACCTTAATAAGGCCTGGCTTTCCCTTTTTT
AACAAATCTTTTTCCCGGGGCATTTTTTGAAAAAAAAACCCCCCATTTTT
GTCTGGTTTTTTTAAAAATTTGGAAACCATATTTAACACCAACAAAAATA
TTCTCTTTAATACAACCCTCTCCTATATTGTTTTTTGTTTTTT
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