DY258098

Overview
NameDY258098
Unique NameDY258098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1343
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP1_MOUSE (C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.021e-11
Identity = 52/224 (23.21%), Postives = 102/224 (45.54%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +DI +A   GI V  +P    + T ++  C  L +Y     L    ++     ++EQ +        + G+T+ I+G G +G  +A R + FG  ++     +  +     + +    +   + DL+    C            V + C  LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVL----FYDPYLSDGIERALGLQRVSTLQDLLFHSDC------------VTLHC-GLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRI 284          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP1_HUMAN (C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.021e-11
Identity = 52/224 (23.21%), Postives = 102/224 (45.54%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +DI +A   GI V  +P    + T ++  C  L +Y     L    ++     ++EQ +        + G+T+ I+G G +G  +A R + FG  ++     +  +     + +    +   + DL+    C            V + C  LN+    ++N   +  M++G+ LVN ARGGL+D +A+A  L+ G +
Sbjct:   78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVL----FYDPYLSDGVERALGLQRVSTLQDLLFHSDC------------VTLHC-GLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRI 284          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: CTBP_DROME (C-terminal-binding protein OS=Drosophila melanogaster GN=CtBP PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 2.639e-11
Identity = 59/227 (25.99%), Postives = 102/227 (44.93%), Query Frame = 1
Query:  268 TMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEM-RMAIEQKKLGVPTG--------ETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHL 921
            T+ L    + +   +++I++ G G + +D+ AA   GI V  +PG         A+ T+ L+L L R+   +  M  E KK   P            + G T+ ++G G IG  +A R + FG  +I     +  +       S    +   + DL+ +  C            V + C +LN+    ++N+  +  M+ G+ LVN ARGGL+D E +A  L+ G +
Sbjct:   78 TIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPG---YGVEEVADTTMCLILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAKAFGFNVI----FYDPYLPDGIDKSLGLTRVYTLQDLLFQSDC------------VSLHC-TLNEHNHHLINEFTIKQMRPGAFLVNTARGGLVDDETLALALKQGRI 284          
BLAST of DY258098 vs. ExPASy Swiss-Prot
Match: FDH_PICAN (Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.679e-11
Identity = 67/245 (27.35%), Postives = 113/245 (46.12%), Query Frame = 1
Query:  217 ISDAPDVIAN-YHLCVVKTMRLDSNVISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTG-NAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT----GETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSALAVKNGIIDDLVDEKGCHEDIFKFASMADVVVCCLSLNKQTAGIVNKSFLSSMKKGSLLVNIARGGLLDYEAIAHYLESGHLGRLG 933
            ISDA  +I+  +H   +   R+D     +A ++KL++  GVG + +D++   + G  ++ +  +VTG N  S AE  +  ML L+R        I      V         + GK +  +G G IG  + +RL  F  K +     +  +  +S ++          ++ V  +  H DI +  + AD+V     L+  + G+VN   L   KKG+ LVN ARG +   E +A  ++SG L   G
Sbjct:   58 ISDADVIISTPFHPAYITKERID-----KAKKLKLLVVAGVGSDHIDLDYINQSGRDISVL--EVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIISGGWNVAEIAKDSFDIEGKVIATIGAGRIGYRVLERLVAFNPKELL----YYDYQSLSKEA----------EEKVGARRVH-DIKELVAQADIVTINCPLHAGSKGLVNAELLKHFKKGAWLVNTARGAICVAEDVAAAVKSGQLRGYG 280          
The following BLAST results are available for this feature:
BLAST of DY258098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CTBP1_MOUSE2.021e-1123.21C-terminal-binding protein 1 OS=Mus musculus GN=Ct... [more]
CTBP1_HUMAN2.021e-1123.21C-terminal-binding protein 1 OS=Homo sapiens GN=CT... [more]
CTBP_DROME2.639e-1125.99C-terminal-binding protein OS=Drosophila melanogas... [more]
FDH_PICAN7.679e-1127.35Formate dehydrogenase OS=Pichia angusta GN=FMDH PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AA08ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258098 ID=DY258098; Name=DY258098; organism=Citrus clementina; type=EST; length=1343bp
GGGAAAAGGCCTCTGGATTTATTCAATATCTGCAGTCTCTTCAGTTCACA
AGGGTAACTGGGCGGATTTGATATAAGCAAAATGGAGGGAATGGCTAGGA
GCAGTGATAAAAACATCACCCGTGTTCTCTTTTGCGGTCCACATTTCCCT
GCTTCCCATAATTATACTAAAGAATACTTGCAAAATTACCCTTCCATTCA
GGTTGATGTGATCCCCATTAGTGATGCGCCTGATGTCATAGCAAACTACC
ATCTTTGTGTGGTAAAAACCATGCGGCTAGATTCAAATGTTATATCTCGT
GCGAATCAAATGAAGCTTATAATGCAGTTTGGGGTTGGCCTGGAAGGTGT
GGATATTAATGCTGCTACAAGATGCGGCATCAAAGTTGCTAGAATCCCAG
GTGACGTGACTGGAAATGCTGCATCGTGTGCTGAATTGACCATATATCTA
ATGCTGGGCCTTCTCAGAAAGCAGAATGAGATGAGAATGGCCATAGAGCA
AAAAAAACTTGGAGTGCCAACTGGTGAGACACTACTTGGGAAAACTGTAT
TTATCTTGGGCTTTGGAAATATTGGGGTTGAATTGGCAAAGCGCTTGCGA
CCATTTGGTGTGAAAATTATTGCCACAAAAAGGAGTTGGGCTTCTCATTC
TCAAGTTTCTTGCCAATCTAGTGCACTTGCAGTAAAAAACGGGATCATTG
ATGATTTGGTTGATGAGAAGGGTTGTCATGAAGATATTTTTAAGTTTGCT
AGCATGGCCGACGTGGTTGTTTGTTGCCTGAGTTTAAATAAGCAGACGGC
TGGCATTGTAAACAAGTCATTTCTATCTTCAATGAAAAAGGGTTCTCTTC
TGGTGAATATTGCTCGAGGAGGTCTTTTAGACTATGAGGCCATTGCTCAT
TACCTCGAATCTGGCCACTTGGGGAGGCTGGGGCATTGATGTTGCTTGGA
CAGACCCCTTTGATCCCCATGACCCCATTCTAAAGTTCAAGAATGTTTTA
ATCAACCTCAAGGTTGGAAGTGTTACCAAACATTCTTACAAATCAAGGGG
CTAAGGTTGGTTGGCCAACGTTGCCCCTCAACTTTCAGGCGGGGGACTCC
TTTGAAAAGGAACTAAAATTTGGGGAATTGAATCCACCCTTCAAAGGAAC
TCTGTTTCCATCCGGCCCAAACCTTAATAAGGCCTGGCTTTCCCTTTTTT
AACAAATCTTTTTCCCGGGGCATTTTTTGAAAAAAAAACCCCCCATTTTT
GTCTGGTTTTTTTAAAAATTTGGAAACCATATTTAACACCAACAAAAATA
TTCTCTTTAATACAACCCTCTCCTATATTGTTTTTTGTTTTTT
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