DY258166

Overview
NameDY258166
Unique NameDY258166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length996
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_PROM3 (Adenylate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 52/170 (30.59%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAME-ESGNDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 718
            LG PG+GKGTQ   +       HLS GDLLRAE+ + +  G     ++  G++V  E+ + +++  ++ +SG   +L+DGFPR      A E +    K   E V+  + ++  +  R+++R  GR DDN   IR R +V+ E + P++ +Y  +G ++ ++A   +  +
Sbjct:    8 LGPPGAGKGTQAERLCAAHELMHLSTGDLLRAEVGAKTPLGQEAAAVMNRGELVSDELVLAIVENQLKNQSGG--WLLDGFPRTLIQATALEPLLEELKQPIEAVVLLELNDAVLIERLISR--GRSDDNESVIRNRLEVYREKTAPLIDHYRQQGLLQTVEAQGSIESI 173          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_OCHA4 (Adenylate kinase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALGTMLAGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTSPLSSYYAGTGELRVINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_CLOBM (Adenylate kinase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 58/206 (28.16%), Postives = 96/206 (46.60%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   I E F   H+S GD+ RA IK  +  G   +  +  G++VP EVTI +++  + +   D  FL+DGFPR      A +   K    E +  L     EE +  R+  R                   +G           R+DD   T+++R +V+ + + P++ YY+  G + +++  + + EVF  +  +
Sbjct:    6 LGPPGAGKGTQAKLISEKFSIPHISTGDIFRANIKEKTPLGIEAKRYMDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVNGTESIDEVFGNISNI 211          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_CHLTB (Adenylate kinase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 60/211 (28.44%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFL--------------IDGFPRN-EENRAAFEAVTKIEPEF-VLFFDCSEEEMERR------------ILNRNQG-------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 730
            +G PGSGKGTQ   +       H+S+GDLLR  +   +     I++ + +GK++P  +  KL+ + ++E   D  L              +DGFPR   + +   E ++   P + V+  D S+EE+  R            I N  QG             R DD +E I  R + + + + PV+ YY  K K+  IDA  P  +VF ++
Sbjct:   11 MGAPGSGKGTQSKLLASQLSLLHISSGDLLRGAVSKDTPLSQEIKSYLDQGKLLPDTLVWKLVHEKLDEFQQDTLLRRLSFLSRSENSAILDGFPRTVTQAKLLHEFLSSYFPNYKVILLDISDEEVLNRLTSRYICPACQGIYNEQQGFSSCPKCSVELIRRSDDTLEVILDRIQTYKQETQPVLDYYTEKQKLITIDANAPTQQVFQSI 221          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_CHLT2 (Adenylate kinase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 60/211 (28.44%), Postives = 96/211 (45.50%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFL--------------IDGFPRN-EENRAAFEAVTKIEPEF-VLFFDCSEEEMERR------------ILNRNQG-------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAV 730
            +G PGSGKGTQ   +       H+S+GDLLR  +   +     I++ + +GK++P  +  KL+ + ++E   D  L              +DGFPR   + +   E ++   P + V+  D S+EE+  R            I N  QG             R DD +E I  R + + + + PV+ YY  K K+  IDA  P  +VF ++
Sbjct:   11 MGAPGSGKGTQSKLLASQLSLLHISSGDLLRGAVSKDTPLSQEIKSYLDQGKLLPDTLVWKLVHEKLDEFQQDTLLRRLSFLSRSENSAILDGFPRTVTQAKLLHEFLSSYFPNYKVILLDISDEEVLNRLTSRYICPACQGIYNEQQGFSSCPKCSVELIRRSDDTLEVILDRIQTYKQETQPVLDYYTEKQKLITIDANAPTQQVFQSI 221          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUMB (Adenylate kinase OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRIINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUAB (Adenylate kinase OS=Brucella abortus GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRIINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUA2 (Adenylate kinase OS=Brucella abortus (strain 2308) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRIINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_BRUA1 (Adenylate kinase OS=Brucella abortus (strain S19) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAA-----------FEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAVFTP 748
            LG PG+GKGTQ   + +  G   LS GD+LRA +   SE G   + ++  G++V  E+  +++ + ++     + F++DG+PR      A            +AV +++ +        E  +   I    Q R DDN E  RKR   + E + P+  YY   G++R I+   PV EV   ++ +  P
Sbjct:    6 LGPPGAGKGTQAGLLTKKHGIPQLSTGDMLRAAVAQQSEIGKRAKAVMDAGQLVSDEIVNQIVSERIDAPDCANGFILDGYPRTVPQAQALSQMLSGKGLKLDAVIELKVDENALVKRMESRVAETIAKGGQVRSDDNPEAFRKRLVEYREKTAPLSSYYAGTGELRIINGMAPVEEVTAEIERILVP 193          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_ANATD (Adenylate kinase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=adk PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.787e-17
Identity = 59/188 (31.38%), Postives = 95/188 (50.53%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF------VLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKG 676
            LG PG+GKGTQ   + + F   H+S GD+LR  +K+ +E G   +  + +G +VP E+ I++++ +  +E   + FL+DGFPR     A  EA+ K+  E       VL  +  +E++  R+  R    N G                         REDD  ET++KR +V+   + P++ YY+AKG
Sbjct:    6 LGAPGAGKGTQAEYLSKRFSIPHISTGDILRENVKNETELGKKAKEYMDKGLLVPDEIVIEIVKDRLSKEDCKNGFLLDGFPR---TIAQAEALDKVLEELGQKIDKVLNIEVPDEKILERMSGRRICKNCGASFHVIYRPPQKEGVCDVCGGELYQREDDKEETVKKRLEVYHAQTQPLIDYYKAKG 190          
The following BLAST results are available for this feature:
BLAST of DY258166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PROM32.787e-1730.59Adenylate kinase OS=Prochlorococcus marinus (strai... [more]
KAD_OCHA42.787e-1728.72Adenylate kinase OS=Ochrobactrum anthropi (strain ... [more]
KAD_CLOBM2.787e-1728.16Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CHLTB2.787e-1728.44Adenylate kinase OS=Chlamydia trachomatis (strain ... [more]
KAD_CHLT22.787e-1728.44Adenylate kinase OS=Chlamydia trachomatis (strain ... [more]
KAD_BRUMB2.787e-1728.72Adenylate kinase OS=Brucella melitensis biotype 2 ... [more]
KAD_BRUAB2.787e-1728.72Adenylate kinase OS=Brucella abortus GN=adk PE=3 S... [more]
KAD_BRUA22.787e-1728.72Adenylate kinase OS=Brucella abortus (strain 2308)... [more]
KAD_BRUA12.787e-1728.72Adenylate kinase OS=Brucella abortus (strain S19) ... [more]
KAD_ANATD2.787e-1731.38Adenylate kinase OS=Anaerocellum thermophilum (str... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258166 ID=DY258166; Name=DY258166; organism=Citrus clementina; type=EST; length=996bp
GACAACAACAAAAAAACTTACATTGGCAATTGGCATCCCTCTGCCTTCTT
TCTTTCCCTCTTTATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCA
ATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAAC
TGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGA
AGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACC
CAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGG
TGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGA
TTCAAAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATT
AAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCAT
CGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTA
CCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAG
ATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGT
TGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTG
TGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCA
AAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAA
AGATGAGAAGGCTGCTGCTTANGTCTTCTCTGTCCAGAGTATCAGATTTA
ATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTTTA
TTATTATGAGGTTATTATGTCACATGTTTTACTAAAATGTCATAAAAGTT
CATAATGTATCATGATATTTATTCCTGTTTGCCTAAGTATTCTTGTTATT
GAAACTGAAAACCAAGATCAAAATTTATAAAACAGCCTTGATGCTT
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