DY258166

Overview
NameDY258166
Unique NameDY258166
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length996
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_TERTT (Adenylate kinase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=adk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.108e-17
Identity = 61/209 (29.19%), Postives = 104/209 (49.76%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKG-------KVRKIDAAKPVAEVFDAV 730
            LG PG+GKGTQ   I+E F    +S GD+LRA +K+GS  G  +++++  G++V  ++ I L+++ + +    + FL DGFPR        EA+T+  +E E V+     +EE+  R+  R                   +G           R+DD  +T+R R  ++ + + P+V+YY+ +        K  +I    P+AE+ D V
Sbjct:    6 LGAPGAGKGTQAKFIMEAFEIPQISTGDMLRAAVKAGSPLGVKVKDIMASGQLVSDDIIIDLVKERISKPDCANGFLFDGFPRTIPQA---EALTESGVEIEHVMEIHVDDEEIVARLSGRRVHEASGRIYHVTHNPPKTEGVDDITGEPLVQRDDDQEDTVRNRLSIYHDQTEPLVEYYQKQEAENPGTVKFTRIAGVGPLAEIKDKV 211          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_LEPCP (Adenylate kinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=adk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.108e-17
Identity = 59/192 (30.73%), Postives = 91/192 (47.40%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKP 706
            LG PG+GKGTQ A I   +G   +S GD+LRA +K+G+E G   + ++  G +V  ++ I L+ ++ +++   + FL DGFPR      A +A   ++ + VL  D   E +  R+  R                                R+DD  ET+RKR +V+   + P+V YY A       DAA P
Sbjct:    6 LGAPGAGKGTQAAFICRKYGIPQISTGDMLRAAVKAGTEMGLAAKKVMDAGGLVSDDIIIGLVKERILQDDCANGFLFDGFPRTIPQAEAMKA-AGVKLDLVLEIDVPSEAIIERMSGRRSHPASGRTYHVKFNPPKVDGVDDVTGEPLVQRDDDKEETVRKRLEVYQAQTRPLVDYYSAWAATG--DAAAP 194          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_LEGPL (Adenylate kinase OS=Legionella pneumophila (strain Lens) GN=adk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.108e-17
Identity = 62/211 (29.38%), Postives = 98/211 (46.45%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIRKRFKVFLESSLPVVQYY--------EAKGKVRKIDAAKPVAEVFDAVKAV 739
            LGGPG+GKGTQ + ++  +    +S GD+LRA I  G+  G   Q +++ G +V  ++ I L+++ ++    D+ FL DGFPR      A +   +I  + V+     +EE+  RI  R                  N G           R+DD  ETIRKR +V+   + P+VQYY        +   K   I     V ++FD +  +
Sbjct:    6 LGGPGAGKGTQASLLINRYKIPQISTGDMLRAAIAKGTPLGLSAQKIMESGGLVSDDIIIGLVKERLKNPDCDRGFLFDGFPRTLVQAEALKD-AEIHLDHVIEIAVDDEEIIERISGRRIHQPSGRVYHVVNQPPKNPGVDDITGEPLIQRDDDKEETIRKRLQVYHSQTAPLVQYYKEWAESGSKEAPKFHTISGTGTVDQIFDNIVTI 215          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_FUSNN (Adenylate kinase OS=Fusobacterium nucleatum subsp. nucleatum GN=adk PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 8.108e-17
Identity = 54/193 (27.98%), Postives = 96/193 (49.74%), Query Frame = 2
Query:  224 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNRNQG------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEV 718
            G PG+GKGTQ   IV+ +G   +S GD+LR  + + ++ G   +  +  G++VP E+   L+ + + E   +K F++DGFPRN  + +   E +TK+  + E V+  +  ++++  RI  R                           R DD  E + KR + +   + PV+ YY+ + KV +ID  K + ++
Sbjct:   10 GAPGAGKGTQAKFIVDKYGIPQISTGDILRVAVANKTKLGLEAKKFMDAGQLVPDEIVNGLVAERLAEKDCEKGFIMDGFPRNVAQAKVLDEILTKLGKQIEKVIALNVPDKDIIERITGRRTSKVTGKIYHIKFNPPVDEKPEDLVQRADDTEEVVVKRLETYHNQTAPVLDYYKVQNKVTEIDGTKKLEDI 202          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SINMW (Adenylate kinase OS=Sinorhizobium medicae (strain WSM419) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 50/185 (27.03%), Postives = 94/185 (50.81%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ  ++ E +G   LS GD+LRA +   +E G   + ++  G++V  E+  +++   ++     K F++DG+PR      A + + +   ++ + V+     E  + RR+ NR           R DDN E  R+R + + E + P+ ++Y   G+++ +D    V  V   ++ +
Sbjct:    6 LGPPGAGKGTQAKHLTERYGIPQLSTGDMLRAAVAQATEVGKRAKAVMDAGQLVSDEIVNEIVSDRIDAPDCAKGFILDGYPRTVPQAVALDRMLEEKNLKLDAVIELKVDEAALVRRMENRVAETVAAGGTVRSDDNPEAFRRRLQEYREKTAPLSEHYARTGRLKTVDGMADVKTVTAEIEKI 190          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_SHEON (Adenylate kinase OS=Shewanella oneidensis GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 64/211 (30.33%), Postives = 102/211 (48.34%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV--------RKIDAAKPVAEVFDAVKAV 739
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY   GKV         K D  + VA V + + +V
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLGIYHEQTKPLVEYY---GKVAAAGNTQYHKFDGTQSVAAVSEQLASV 212          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_PYRKO (Adenylate kinase OS=Pyrococcus kodakaraensis GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 53/202 (26.24%), Postives = 96/202 (47.52%), Query Frame = 2
Query:  224 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEE-----NRAAFEAVTKIEPEFVLFF--DCSEEEMERRILNRNQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVFDAVK 733
            G PGSGK T    I+E +G  ++S+GDL+R EI+  S  G  ++  +  G ++P  +   L+   +     + F++DG+PR  E         F+   K++    +F   D S E +  R +  N G                         R DD  E +RKR++++ ++  P++++Y AKG   ++D   P++EV+  ++
Sbjct:    7 GPPGSGKSTHSRTIMEKYGLVYISSGDLIRREIERKSSLGREMEAYLSRGDLIPDTIVNTLIISKLRRQ-RENFILDGYPRTPEQVISLENYLFDHGIKLDLALEIFIDEDTSVERISGRRICPNCGAVYHVKYNPPKVPGICDVCGSELIQRADDREEVVRKRYRIYSKNMEPIIKFYRAKGIYVRVDGDGPISEVWKRIQ 207          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_DIAST (Adenylate kinase OS=Diaphorobacter sp. (strain TPSY) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 57/191 (29.84%), Postives = 92/191 (48.17%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAK 703
            LG PG+GKGTQ A I + FG   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + E      FL DGFPR      A +A   ++ ++VL  D   + +  R+  R                                REDD  ET++KR +V+ + + P+V YY +  K    +A K
Sbjct:    6 LGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQADAMKA-AGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAKTDPANAPK 195          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_COLP3 (Adenylate kinase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 58/183 (31.69%), Postives = 91/183 (49.73%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGK 679
            LG PG+GKGTQ   ++  FG   +S GD+LRA IK+GSE G   + ++  G++V  ++ I L+ ++  +E     FL+DGFPR      A +  + I  + VL FD  +E +  R+  R                   +G           R DD   T+RKR  ++ E + P+V +Y+A+ K
Sbjct:    6 LGAPGAGKGTQAQFLMAKFGIPQISTGDMLRAAIKAGSELGNKAKAVMDAGQLVSDDLIIGLVKERVAQEDCKAGFLLDGFPRTIPQADAMKE-SGIVVDHVLEFDVPDEVIVERMAGRRVHSGSGRVYHLVYNPPKVEGKDDVSGDDLSIRPDDEEATVRKRLAIYHEQTKPLVDFYQAEAK 187          
BLAST of DY258166 vs. ExPASy Swiss-Prot
Match: KAD_CHLMU (Adenylate kinase OS=Chlamydia muridarum GN=adk PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.059e-16
Identity = 59/208 (28.37%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  221 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFL--------------IDGFPRN-EENRAAFEAVTKIEPEF-VLFFDCSEEEMERR------------ILNRNQG-------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKIDAAKPVAEVF 721
            +G PGSGKGTQ   +       H+S+GDLLR  +   +  G  I++ + +GK++P ++  KL+ + ++E   D  L              +DGFPR   + +   E +    P++ ++  D S+EE+  R            I N+ QG             R DD  E I  R + + + + PV+ YY A  ++  IDA  P  +VF
Sbjct:   11 MGAPGSGKGTQSKLLASQLSLQHISSGDLLRNAVSQNTPLGQEIKSYLDQGKLLPDQLVWKLVHEKLDELQQDTLLRKLSFLSRSENGAILDGFPRTVAQAKLLNEFLCSYFPDYKIILLDISDEEVLNRLTSRYICPSCQGIYNKQQGFSRCPKCLVELTRRSDDTPEVILDRIQTYKQETQPVLDYYAALQRLITIDANAPTQQVF 218          
The following BLAST results are available for this feature:
BLAST of DY258166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_TERTT8.108e-1729.19Adenylate kinase OS=Teredinibacter turnerae (strai... [more]
KAD_LEPCP8.108e-1730.73Adenylate kinase OS=Leptothrix cholodnii (strain A... [more]
KAD_LEGPL8.108e-1729.38Adenylate kinase OS=Legionella pneumophila (strain... [more]
KAD_FUSNN8.108e-1727.98Adenylate kinase OS=Fusobacterium nucleatum subsp.... [more]
KAD_SINMW1.059e-1627.03Adenylate kinase OS=Sinorhizobium medicae (strain ... [more]
KAD_SHEON1.059e-1630.33Adenylate kinase OS=Shewanella oneidensis GN=adk P... [more]
KAD_PYRKO1.059e-1626.24Adenylate kinase OS=Pyrococcus kodakaraensis GN=ad... [more]
KAD_DIAST1.059e-1629.84Adenylate kinase OS=Diaphorobacter sp. (strain TPS... [more]
KAD_COLP31.059e-1631.69Adenylate kinase OS=Colwellia psychrerythraea (str... [more]
KAD_CHLMU1.059e-1628.37Adenylate kinase OS=Chlamydia muridarum GN=adk PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BE04ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258166 ID=DY258166; Name=DY258166; organism=Citrus clementina; type=EST; length=996bp
GACAACAACAAAAAAACTTACATTGGCAATTGGCATCCCTCTGCCTTCTT
TCTTTCCCTCTTTATTCTTCTCTCTCTCTCCAAACAAAACAACGCTCGCA
ATTCGCTAAGATCGGTTATTCAGACTGAGTTAGTTGGCGCTGATGGGAAC
TGTGGTTGAAACTCCTGTCAAGGAAGCAGATGCTACCGTAACTGTGAAGA
AGCCCACTGTTGTTTTTGTTTTGGGTGGACCAGGCAGTGGAAAAGGAACC
CAGTGCGCAAACATTGTTGAACACTTTGGATACACCCATCTCAGTGCTGG
TGATCTTCTCAGAGCCGAAATCAAATCTGGCTCTGAAAATGGAACCATGA
TTCAAAACATGATTAAAGAGGGAAAAATCGTTCCTTCAGAGGTCACAATT
AAGCTTCTCCAAAAAGCAATGGAGGAAAGTGGAAATGATAAATTTCTCAT
CGATGGTTTTCCCAGAAACGAGGAAAATCGTGCTGCATTTGAAGCTGTTA
CCAAAATTGAGCCAGAATTCGTTCTGTTTTTTGACTGTTCTGAGGAGGAG
ATGGAGAGGCGCATTTTGAATAGGAATCAGGGAAGAGAAGATGATAACGT
TGAGACAATTAGGAAGCGGTTTAAGGTTTTCTTAGAATCTAGTCTCCCTG
TGGTTCAATATTATGAAGCTAAGGGTAAAGTTCGGAAGATTGATGCTGCA
AAGCCTGTTGCAGAGGTTTTTGATGCTGTTAAAGCTGTTTTTACCCCAAA
AGATGAGAAGGCTGCTGCTTANGTCTTCTCTGTCCAGAGTATCAGATTTA
ATATCAAGGTGGTGGTATTGTTGTTGGCTGCTGCCTATTATTGTACTTTA
TTATTATGAGGTTATTATGTCACATGTTTTACTAAAATGTCATAAAAGTT
CATAATGTATCATGATATTTATTCCTGTTTGCCTAAGTATTCTTGTTATT
GAAACTGAAAACCAAGATCAAAATTTATAAAACAGCCTTGATGCTT
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