DY258175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THEMA (60 kDa chaperonin OS=Thermotoga maritima GN=groL PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.614e-31 Identity = 75/158 (47.47%), Postives = 105/158 (66.46%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVV---EIKEPEPAMP 467 VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E L+ DE K+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++V E K+ P+MP Sbjct: 379 VGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGDE-KIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPSMP 535
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_ACIBL (60 kDa chaperonin OS=Acidobacteria bacterium (strain Ellin345) GN=groL PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.614e-31 Identity = 75/157 (47.77%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 473 VGA TETE+KEKK RVEDA++AT+AA L+R VDA+K T D E +GANI+KRAL PL+ I NAG G++V K+ + YGYNA T Y DL+ AG+IDPTKV R L++A S+A L ++ ++ EI E + + PAG Sbjct: 390 VGAATETEMKEKKARVEDAMHATRAAVEEGIVPGGGVALIRCVEAVDALKLTGD---EGIGANIIKRALEEPLRQIVGNAGEEGAIVVGKIRDHKDPHYGYNAQTSEYVDLVKAGVIDPTKVTRTALQNAGSIAGLMLTTEALISEIPEEKKSEPAG 543
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.614e-31 Identity = 75/163 (46.01%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 485 VG TE E+KEKK RV+DAL+AT+AA LLR +D+IK ND+++VG +IV+RA+ P++ IA+NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PAMPAG MD Sbjct: 381 VGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSIKTA--NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGMD 541
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH602_PROM5 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9515) GN=groL2 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.614e-31 Identity = 74/167 (44.31%), Postives = 106/167 (63.47%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 503 VGA TETE+K+KKLR+EDA+NATKAA TL L+ + + + EE +GANIV+ +L PL IA+NAG NG+V++E V S + G+NAATG Y D+ +AGI+DP KV R L++A+S+A L ++C+V ++ E + + PAG P + Y Sbjct: 379 VGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPILKEWADATLSGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADMPEKKESAPAGAPGMGGDFDY 544
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 135.191 bits (339), Expect = 4.614e-31 Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 497 VGA TETE+K++KLR+EDA+NATKAA TL L+ +++ DEE GA IV RAL PLK IA+NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 379 VGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPQLEDWATGNLKDEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E L+ DE K+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++VE E + P+ Sbjct: 379 VGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGDE-KIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPS 533
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THEP1 (60 kDa chaperonin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=groL PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31 Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E L+ DE K+GA IV +AL P+K IA+NAG +G+V+ EK+LS+D+ YG++A G Y ++ GIIDP KV R L++A+S+A L ++ ++VE E + P+ Sbjct: 379 VGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELEGDE-KIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNMFERGIIDPAKVTRSALQNAASIAGMLLTTEVLIVEKPEEKKETPS 533
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: RUB2_BRANA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31 Identity = 75/156 (48.08%), Postives = 107/156 (68.59%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETEL+++KLR+EDA NAT AA TL+ LS+ + AIKET ++ + ++GA+IV++AL LIA+NAG+ G VV EK++ S+ + GYNA T YE+L+ AG+IDP KV RC L++A+SVA L + +VV+ +P+P PA Sbjct: 423 VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKETFEDADVRLGADIVQKAL-VAQSLIAQNAGIEGEVVVEKIMFSE-WELGYNAMTDTYENLLEAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVD--KPKPKAPA 574
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_THENE (60 kDa chaperonin OS=Thermotoga neapolitana GN=groL PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31 Identity = 73/156 (46.79%), Postives = 103/156 (66.03%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 470 VGA TETELKEKK R+EDAL+AT+AA TLLR V+ + E LD DE K+GA IV +AL P++ IA+NAG +G+V+ EK+L+SD+ YG++A G + ++ GIIDP KV R L++A+S+A L ++ +VVE E + P+ Sbjct: 379 VGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRSRKAVEKLLEELDGDE-KIGAQIVYKALSAPIRQIAENAGYDGAVIIEKILASDDPAYGFDALRGEFGNMFEKGIIDPAKVTRSALQNAASIAGMLLTTEVLVVEKPEEKKETPS 533
BLAST of DY258175 vs. ExPASy Swiss-Prot
Match: CH60_LAWIP (60 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groL PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 7.870e-31 Identity = 75/155 (48.39%), Postives = 100/155 (64.52%), Query Frame = 3 Query: 3 VGAQTETELKEKKLRVEDALNATKAAXXXXXXXXXXCTLLRLSSKVDAIKETLDNDEEKVGANIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 467 VGA TETE+KEKK RVEDALNAT+AA +R +D IK +D+E G NI++R+L PL+ IA NAG GS+V EKV + + +G+NAA+G YEDL+ AG+IDP KV R L++A+SVA L ++C + E EP+ MP Sbjct: 381 VGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTAFVRSIKVLDDIKPA--DDDELAGLNIIRRSLEEPLRQIAANAGYEGSIVVEKVREAKDG-FGFNAASGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMP 532 The following BLAST results are available for this feature:
BLAST of DY258175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258175 ID=DY258175; Name=DY258175; organism=Citrus clementina; type=EST; length=860bpback to top |