DY258182

Overview
NameDY258182
Unique NameDY258182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: AL1A1_HUMAN (Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1 PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 9.582e-31
Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEW 307
            ++KP+E   +T L +A + +E G PPG++NIV G GP AGA + SH  +DK+AFTGS   G  I  AA    +K V+LELGGKSP IV  D DLD AVE+
Sbjct:  191 VVKPAEQTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVLADADLDNAVEF 290

HSP 2 Score: 35.8094 bits (81), Expect = 9.582e-31
Identity = 22/63 (34.92%), Postives = 32/63 (50.79%), Query Frame = 1 
Query:  466 GPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            GP + + QY+KIL  + +GK EGA   +         KG F++     NV  E+R  K +I G
Sbjct:  343 GPQIDKEQYDKILDLIESGKKEGAK--LECGGGPWGNKGYFVQPTVFSNVTDEMRIAKEEIFG 403

HSP 3 Score: 35.4242 bits (80), Expect = 9.582e-31
Identity = 17/37 (45.95%), Postives = 22/37 (59.46%), Query Frame = 3 
Query:  318 GCFWTNGQICSATSRLLVHESIAANFLKRMVEGNPKH 428
            G F+  GQ C A SR+ V ESI   F++R VE   K+
Sbjct:  294 GVFYHQGQCCIAASRIFVEESIYDEFVRRSVERAKKY 330
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.587e-31
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE   +T L+LAE+  E GLP G+ N+V G G E G  L  HP ++KI+FTG   TG ++MA+AA   +K V++ELGGKSP+I+ ED DL++A +
Sbjct:  172 AMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAAD 272

HSP 2 Score: 43.1282 bits (100), Expect = 9.587e-31
Identity = 19/52 (36.54%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:  394 F*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            F K  ++ ++ I+I D + E   FGP+ S    EK+L F+ +GK +GA  L+
Sbjct:  302 FEKAVVERVKRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLI 353

HSP 3 Score: 28.1054 bits (61), Expect = 9.587e-31
Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ V +S  A+F K +VE
Sbjct:  279 FFSSGQVCTNGTRVFVPKSRLADFEKAVVE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: AL1A1_RAT (Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Aldh1a1 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 1.244e-30
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEW 307
            ++KP+E   +T L +A + +E G PPG++NIV G GP AGA + SH  VDK+AFTGS   G  I  AA    +K V+LELGGKSP IVF D DLD AVE+
Sbjct:  191 VVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTQVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDIAVEF 290

HSP 2 Score: 35.039 bits (79), Expect = 1.244e-30
Identity = 22/74 (29.73%), Postives = 36/74 (48.65%), Query Frame = 1 
Query:  433 ISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            + + L +    GP + + Q++KIL  + +GK EGA   +         KG F++     NV  E+R  K +I G
Sbjct:  332 LGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAK--LECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFG 403

HSP 3 Score: 33.8834 bits (76), Expect = 1.244e-30
Identity = 15/37 (40.54%), Postives = 22/37 (59.46%), Query Frame = 3 
Query:  318 GCFWTNGQICSATSRLLVHESIAANFLKRMVEGNPKH 428
            G F+  GQ C A SR+ V ES+   F+++ VE   K+
Sbjct:  294 GVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKY 330
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.245e-30
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE   +T L+LAE+  E GLP G+ N+V G G E G  L  HP ++KI+FTG   TG ++MA+AA   +K V++ELGGKSP+I+ ED DL++A +
Sbjct:  172 AMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAAD 272

HSP 2 Score: 42.743 bits (99), Expect = 1.245e-30
Identity = 18/52 (34.62%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:  394 F*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            F K  ++ ++ I++ D + E   FGP+ S    EK+L F+ +GK +GA  L+
Sbjct:  302 FEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLI 353

HSP 3 Score: 28.1054 bits (61), Expect = 1.245e-30
Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ V +S  A+F K +VE
Sbjct:  279 FFSSGQVCTNGTRVFVPKSRLADFEKAVVE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.245e-30
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE   +T L+LAE+  E GLP G+ N+V G G E G  L  HP ++KI+FTG   TG ++MA+AA   +K V++ELGGKSP+I+ ED DL++A +
Sbjct:  172 AMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAAD 272

HSP 2 Score: 42.743 bits (99), Expect = 1.245e-30
Identity = 18/52 (34.62%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:  394 F*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            F K  ++ ++ I++ D + E   FGP+ S    EK+L F+ +GK +GA  L+
Sbjct:  302 FEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLI 353

HSP 3 Score: 28.1054 bits (61), Expect = 1.245e-30
Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ V +S  A+F K +VE
Sbjct:  279 FFSSGQVCTNGTRVFVPKSRLADFEKAVVE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.245e-30
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE   +T L+LAE+  E GLP G+ N+V G G E G  L  HP ++KI+FTG   TG ++MA+AA   +K V++ELGGKSP+I+ ED DL++A +
Sbjct:  172 AMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAAD 272

HSP 2 Score: 42.743 bits (99), Expect = 1.245e-30
Identity = 18/52 (34.62%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:  394 F*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            F K  ++ ++ I++ D + E   FGP+ S    EK+L F+ +GK +GA  L+
Sbjct:  302 FEKAVVERVKRIRVGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLI 353

HSP 3 Score: 28.1054 bits (61), Expect = 1.245e-30
Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ V +S  A+F K +VE
Sbjct:  279 FFSSGQVCTNGTRVFVPKSRLADFEKAVVE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.348e-30
Identity = 53/101 (52.48%), Postives = 73/101 (72.28%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+ S+T L+LAE+  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F DVDLDKA +
Sbjct:  172 AMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADVDLDKAAD 272

HSP 2 Score: 41.9726 bits (97), Expect = 2.348e-30
Identity = 19/58 (32.76%), Postives = 35/58 (60.34%), Query Frame = 1 
Query:  376 KALQQIF*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            +ALQ  F +  ++ ++ I I D  +E   FGP+VS    + +++++ +GK EGA  L+
Sbjct:  296 QALQAAFEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLI 353
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_SERP5 (Betaine aldehyde dehydrogenase OS=Serratia proteamaculans (strain 568) GN=betB PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.348e-30
Identity = 52/101 (51.49%), Postives = 72/101 (71.29%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+ S+T L+LAE+  E GLP G+ N+VTG G E G  L  HP + K++FTG   TG ++MA A+   +K V++ELGGKSP+I+F+D DLD+A +
Sbjct:  172 AMIFKPSEVTSLTALKLAEIYTEAGLPDGVFNVVTGSGAEVGQYLTDHPGIAKVSFTGGVKTGKKVMANASGSTLKEVTMELGGKSPLIIFDDADLDRAAD 272

HSP 2 Score: 43.1282 bits (100), Expect = 2.348e-30
Identity = 21/56 (37.50%), Postives = 32/56 (57.14%), Query Frame = 1 
Query:  379 ALQQIF*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            ALQ  F    L+ ++ I++ D  +    FGP+VS    E +L+F+ +GKN GA  L
Sbjct:  297 ALQAQFEAKILERVKRIRLGDPTDPQTNFGPLVSFAHMESVLRFIESGKNSGARLL 352
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: AL1A7_RAT (Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norvegicus GN=Aldh1a7 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.725e-30
Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEW 307
            I+KP+E   +T L +A + +E G PPG++N+V G G  AGA + SH  +DK++FTGS   G  I  AA    +K V+LELGGKSP IVF D DLD AVE+
Sbjct:  191 IVKPAEQTPLTALYMASLIKEAGFPPGVVNVVPGYGSTAGAAISSHMDIDKVSFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPCIVFADADLDSAVEF 290

HSP 2 Score: 37.7354 bits (86), Expect = 2.725e-30
Identity = 19/37 (51.35%), Postives = 23/37 (62.16%), Query Frame = 3 
Query:  318 GCFWTNGQICSATSRLLVHESIAANFLKRMVEGNPKH 428
            G F+  GQIC A SRL V ESI   F++R VE   K+
Sbjct:  294 GVFFHQGQICVAASRLFVEESIYDEFVRRSVERAKKY 330

HSP 3 Score: 34.2686 bits (77), Expect = 2.725e-30
Identity = 22/74 (29.73%), Postives = 35/74 (47.30%), Query Frame = 1 
Query:  433 ISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            + + L+     GP + + Q+ KIL  + +GK EGA   +         KG F++     NV  E+R  K +I G
Sbjct:  332 LGNPLDSGISQGPQIDKEQHAKILDLIESGKKEGAK--LECGGGRWGNKGFFVQPTVFSNVTDEMRIAKEEIFG 403
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.727e-30
Identity = 51/101 (50.50%), Postives = 70/101 (69.31%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE   +T L+LAE+  E GLP G+ N+V G G E G  L  HP ++KI+FTG   TG ++MA+AA   +K V++ELGGKSP+I+ ED DL++A +
Sbjct:  172 AMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMASAAGSTLKEVTMELGGKSPLIICEDADLNRAAD 272

HSP 2 Score: 41.5874 bits (96), Expect = 2.727e-30
Identity = 19/52 (36.54%), Postives = 30/52 (57.69%), Query Frame = 1 
Query:  394 F*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            F K  ++ ++ I I D + E   FGP+ S    EK+L F+ +GK +GA  L+
Sbjct:  302 FEKAVVERVKRILIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLI 353

HSP 3 Score: 28.1054 bits (61), Expect = 2.727e-30
Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ V +S  A+F K +VE
Sbjct:  279 FFSSGQVCTNGTRVFVPKSRLADFEKAVVE 308
The following BLAST results are available for this feature:
BLAST of DY258182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
AL1A1_HUMAN9.582e-3152.00Retinal dehydrogenase 1 OS=Homo sapiens GN=ALDH1A1... [more]
BETB_ACIBC9.587e-3150.50Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
AL1A1_RAT1.244e-3054.00Retinal dehydrogenase 1 OS=Rattus norvegicus GN=Al... [more]
BETB_ACIBY1.245e-3050.50Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB51.245e-3050.50Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB31.245e-3050.50Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_YERPY2.348e-3052.48Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_SERP52.348e-3051.49Betaine aldehyde dehydrogenase OS=Serratia proteam... [more]
AL1A7_RAT2.725e-3051.00Aldehyde dehydrogenase, cytosolic 1 OS=Rattus norv... [more]
BETB_ACIBS2.727e-3050.50Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258182 ID=DY258182; Name=DY258182; organism=Citrus clementina; type=EST; length=713bp
ATGCGCTGCAATATTAAAGCCATCCGAATTGGCATCTGTGACCTGTTTGG
AGCTTGCTGAAGTGTGTAGAGAGGTGGGTCTTCCTCCCGGCATTCTTAAT
ATTGTCACCGGATTGGGTCCTGAAGCTGGGGCTCCTTTGGTATCCCATCC
CCATGTCGACAAGATTGCATTTACTGGAAGCAATGCAACAGGGATCAGGA
TAATGGCTGCTGCAGCTCCGATGGTCAAGCCTGTTTCTTTGGAGCTGGGA
GGAAAAAGTCCAATCATTGTGTTTGAGGATGTTGATCTAGATAAAGCGGT
TGAGTGGACCATCTTTTGGTTGCTTTTGGACAAATGGTCAAATCTGTAGT
GCAACATCTCGCCTTCTTGTGCACGAAAGCATTGCAGCAAATTTTTTAAA
AAGGATGGTTGAAGGGAATCCAAAACATTAAGATTTCCGATTCCCTGGAA
GAAAGTTGCAAATTTGGTCCTGTTGTTAGCGAAGGGCAGTATGAAAAAAT
TTTGAAATTTCTTTCAAATGGCAAAAACGAAGGGGCACCATTTTTGGTGG
GGGGGGGCCCTCCGGGACCTTTTGAAAAAGGGGATTTTTTGAAAAAACCA
ACCCTCCAAAACGTGGAATTACGCACAACTAAAGGGAAAATTTTGGGAAA
AAAAAAAGATTTTTTTGGGGAACCTGTTTTTTTGGGTGGTGTTAGGAGGG
GGTTTTTTTCCCC
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