DY258182

Overview
NameDY258182
Unique NameDY258182
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.981e-30
Identity = 52/101 (51.49%), Postives = 74/101 (73.27%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+ S+T L+LAE+  E G+P G+ N++TG G E G  L  HP ++K++FTG   TG ++MA A++  +K V++ELGGKSP+IVFED DLD+A +
Sbjct:  172 AMIFKPSEVTSLTTLKLAEIYTEAGVPAGVFNVLTGSGREVGTWLTEHPRIEKVSFTGGTDTGKKVMASASSSSLKEVTMELGGKSPLIVFEDADLDRAAD 272

HSP 2 Score: 40.4318 bits (93), Expect = 3.981e-30
Identity = 23/73 (31.51%), Postives = 36/73 (49.32%), Query Frame = 1 
Query:  376 KALQQIF*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLK 594
            K LQ  F    ++ +  I++ D  +E+  FGP+VS    E +L +++ GK +GA  L           GDF K
Sbjct:  296 KHLQAAFEAKIVERVARIRVGDPQDENTNFGPLVSFAHMESVLGYIAKGKEQGARLL---CGGDRLTDGDFAK 365
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAST (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae GN=ALD5 PE=1 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 4.592e-30
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            +LKP+E   ++ L  +++C+E G+P G++NI+ G G   G  L +HP V KIAFTGS ATG  IM  AA  VK V+LELGGKSP IVF D DLDKAV+
Sbjct:  211 VLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADTVKKVTLELGGKSPNIVFADADLDKAVK 308

HSP 2 Score: 32.7278 bits (73), Expect = 4.592e-30
Identity = 21/78 (26.92%), Postives = 37/78 (47.44%), Query Frame = 1 
Query:  421 QNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            +++K+ D  +E    G   S+ Q  KIL ++   K+EGA  +          KG F+K     +V  ++R  K ++ G
Sbjct:  347 ESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHG--SKGYFVKPTVFADVKGDMRIVKEEVFG 422

HSP 3 Score: 30.8018 bits (68), Expect = 4.592e-30
Identity = 10/38 (26.32%), Postives = 24/38 (63.16%), Query Frame = 3 
Query:  294 KRLSGPSFGCFWTNGQICSATSRLLVHESIAANFLKRM 407
            K +   +FG F+ +G++C A SR+ + +++    L+++
Sbjct:  305 KAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKL 342
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: ALDH5_YEAS7 (Aldehyde dehydrogenase 5, mitochondrial OS=Saccharomyces cerevisiae (strain YJM789) GN=ALD5 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 4.592e-30
Identity = 54/98 (55.10%), Postives = 69/98 (70.41%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            +LKP+E   ++ L  +++C+E G+P G++NI+ G G   G  L +HP V KIAFTGS ATG  IM  AA  VK V+LELGGKSP IVF D DLDKAV+
Sbjct:  211 VLKPAETTPLSALFASQLCQEAGIPAGVVNILPGSGRVVGERLSAHPDVKKIAFTGSTATGRHIMKVAADTVKKVTLELGGKSPNIVFADADLDKAVK 308

HSP 2 Score: 32.7278 bits (73), Expect = 4.592e-30
Identity = 21/78 (26.92%), Postives = 37/78 (47.44%), Query Frame = 1 
Query:  421 QNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            +++K+ D  +E    G   S+ Q  KIL ++   K+EGA  +          KG F+K     +V  ++R  K ++ G
Sbjct:  347 ESLKVGDPFDEEVFQGAQTSDKQLHKILDYVDVAKSEGARLVTGGARHG--SKGYFVKPTVFADVKEDMRIVKEEVFG 422

HSP 3 Score: 30.8018 bits (68), Expect = 4.592e-30
Identity = 10/38 (26.32%), Postives = 24/38 (63.16%), Query Frame = 3 
Query:  294 KRLSGPSFGCFWTNGQICSATSRLLVHESIAANFLKRM 407
            K +   +FG F+ +G++C A SR+ + +++    L+++
Sbjct:  305 KAVKNIAFGIFYNSGEVCCAGSRIYIQDTVYEEVLQKL 342
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.598e-30
Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA A++  +K V++ELGGKSP+I+F D DLD+A +
Sbjct:  172 AMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAAD 272

HSP 2 Score: 36.1946 bits (82), Expect = 4.598e-30
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            L+ +Q I++ D  +E+  FGP+VS    E +L ++ +GK + A  L
Sbjct:  307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLL 352

HSP 3 Score: 28.4906 bits (62), Expect = 4.598e-30
Identity = 10/30 (33.33%), Postives = 21/30 (70.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ +H S  A F  +++E
Sbjct:  279 FFSSGQVCTNGTRVFIHRSQQARFEAKVLE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.598e-30
Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA A++  +K V++ELGGKSP+I+F D DLD+A +
Sbjct:  172 AMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAAD 272

HSP 2 Score: 36.1946 bits (82), Expect = 4.598e-30
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            L+ +Q I++ D  +E+  FGP+VS    E +L ++ +GK + A  L
Sbjct:  307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLL 352

HSP 3 Score: 28.4906 bits (62), Expect = 4.598e-30
Identity = 10/30 (33.33%), Postives = 21/30 (70.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ +H S  A F  +++E
Sbjct:  279 FFSSGQVCTNGTRVFIHRSQQARFEAKVLE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEA7 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=betB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.598e-30
Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA A++  +K V++ELGGKSP+I+F D DLD+A +
Sbjct:  172 AMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAAD 272

HSP 2 Score: 36.1946 bits (82), Expect = 4.598e-30
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            L+ +Q I++ D  +E+  FGP+VS    E +L ++ +GK + A  L
Sbjct:  307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLL 352

HSP 3 Score: 28.4906 bits (62), Expect = 4.598e-30
Identity = 10/30 (33.33%), Postives = 21/30 (70.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ +H S  A F  +++E
Sbjct:  279 FFSSGQVCTNGTRVFIHRSQQARFEAKVLE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: AL1A1_HORSE (Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1A1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.967e-30
Identity = 51/101 (50.50%), Postives = 68/101 (67.33%), Query Frame = 2 
Query:   11 ILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAAPM-VKPVSLELGGKSPIIVFEDVDLDKAVEWT 310
            ++KP+E   ++ L +A + +E G PPG++NIV G GP AGA + SH  +DK+AFTGS   G  I  AA    +K V+LELGGKSP IVF D DL+ A+E T
Sbjct:  190 VVKPAEQTPLSALHVATLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDIDKVAFTGSTEVGKLIKEAAGKSNLKRVTLELGGKSPFIVFADADLETALEVT 290

HSP 2 Score: 36.1946 bits (82), Expect = 5.967e-30
Identity = 22/63 (34.92%), Postives = 32/63 (50.79%), Query Frame = 1 
Query:  466 GPVVSEGQYEKILKFLSNGKNEGAPFLVXXXXXXXFEKGDFLKKPTLQNV--ELRTTKGKILG 648
            GP + + QY+KIL  + +GK EGA   +         KG F++     NV  E+R  K +I G
Sbjct:  342 GPQIDKEQYDKILDLIESGKKEGAK--LECGGGPWGNKGYFIQPTVFSNVSDEMRIAKEEIFG 402

HSP 3 Score: 34.2686 bits (77), Expect = 5.967e-30
Identity = 17/35 (48.57%), Postives = 21/35 (60.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVEGNPKH 428
            F+  GQ C A SRL V ESI   F++R VE   K+
Sbjct:  295 FYHQGQCCVAASRLFVEESIYDEFVRRSVERAKKY 329
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 5.970e-30
Identity = 50/101 (49.50%), Postives = 73/101 (72.28%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+  +T L+LAE+  E G+P G+ N++TG G E G  L  HP ++KI+FTG  +TG ++MA A++  +K V++ELGGKSP+I+F D DLD+A +
Sbjct:  172 AMIFKPSEVTPLTTLKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAAD 272

HSP 2 Score: 36.1946 bits (82), Expect = 5.970e-30
Identity = 16/46 (34.78%), Postives = 28/46 (60.87%), Query Frame = 1 
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            L+ +Q I++ D  +E+  FGP+VS    E +L ++ +GK + A  L
Sbjct:  307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLL 352

HSP 3 Score: 28.4906 bits (62), Expect = 5.970e-30
Identity = 10/30 (33.33%), Postives = 21/30 (70.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ +H S  A F  +++E
Sbjct:  279 FFSSGQVCTNGTRVFIHRSQQARFEAKVLE 308
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_YERP3 (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=betB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.749e-30
Identity = 52/101 (51.49%), Postives = 72/101 (71.29%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMA-AAAPMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+ S+T L+LAE+  E GLP G+ N++TG G + G  L  HP + K++FTG  A+G ++MA AA   +K V++ELGGKSP+I+F D DLDKA +
Sbjct:  172 AMIFKPSEVTSLTALKLAEIYTEAGLPAGVFNVLTGSGDQVGQMLTEHPGIAKVSFTGGIASGKKVMANAAGSTLKDVTMELGGKSPLIIFADADLDKAAD 272

HSP 2 Score: 41.9726 bits (97), Expect = 6.749e-30
Identity = 19/58 (32.76%), Postives = 35/58 (60.34%), Query Frame = 1 
Query:  376 KALQQIF*KGWLKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFLV 549
            +ALQ  F +  ++ ++ I I D  +E   FGP+VS    + +++++ +GK EGA  L+
Sbjct:  296 QALQAAFEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLI 353
[Close]
BLAST of DY258182 vs. ExPASy Swiss-Prot
Match: BETB_PSEU5 (Betaine aldehyde dehydrogenase OS=Pseudomonas stutzeri (strain A1501) GN=betB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.007e-29
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 2 
Query:    5 AAILKPSELASVTCLELAEVCREVGLPPGILNIVTGLGPEAGAPLVSHPHVDKIAFTGSNATGIRIMAAAA-PMVKPVSLELGGKSPIIVFEDVDLDKAVE 304
            A I KPSE+  ++ L LAE+  E GLP G+ N++TG G   GA +  HP + K++FTG  ATG ++MA+AA   +K V++ELGGKSP+IV ED DLD+A +
Sbjct:  172 AMIFKPSEVTPLSALRLAEIFSEAGLPDGVFNVLTGSGAGVGALITEHPRIAKVSFTGGVATGKKVMASAAGSSLKDVTMELGGKSPLIVCEDADLDRAAD 272

HSP 2 Score: 39.6614 bits (91), Expect = 1.007e-29
Identity = 16/46 (34.78%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:  409 LKGIQNIKISDSLEESCKFGPVVSEGQYEKILKFLSNGKNEGAPFL 546
            L+ +Q +++ D  +E+  FGP+VS    +K+L +++ GK  GA  L
Sbjct:  307 LERVQRVRLGDPQQEATNFGPLVSFAHMDKVLDYIAQGKAAGARIL 352

HSP 3 Score: 25.409 bits (54), Expect = 1.007e-29
Identity = 8/30 (26.67%), Postives = 21/30 (70.00%), Query Frame = 3 
Query:  324 FWTNGQICSATSRLLVHESIAANFLKRMVE 413
            F+++GQ+C+  +R+ +   + A+F  +++E
Sbjct:  279 FFSSGQVCTNGTRVFIPAGLKASFEAKLLE 308
The following BLAST results are available for this feature:
BLAST of DY258182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 395
Match NameE-valueIdentityDescription
BETB_PSEFS3.981e-3051.49Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
ALDH5_YEAST4.592e-3055.10Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
ALDH5_YEAS74.592e-3055.10Aldehyde dehydrogenase 5, mitochondrial OS=Sacchar... [more]
BETB_PSEAE4.598e-3049.50Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA84.598e-3049.50Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA74.598e-3049.50Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
AL1A1_HORSE5.967e-3050.50Retinal dehydrogenase 1 OS=Equus caballus GN=ALDH1... [more]
BETB_PSEAB5.970e-3049.50Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_YERP36.749e-3051.49Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_PSEU51.007e-2950.50Betaine aldehyde dehydrogenase OS=Pseudomonas stut... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3BG07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258182 ID=DY258182; Name=DY258182; organism=Citrus clementina; type=EST; length=713bp
ATGCGCTGCAATATTAAAGCCATCCGAATTGGCATCTGTGACCTGTTTGG
AGCTTGCTGAAGTGTGTAGAGAGGTGGGTCTTCCTCCCGGCATTCTTAAT
ATTGTCACCGGATTGGGTCCTGAAGCTGGGGCTCCTTTGGTATCCCATCC
CCATGTCGACAAGATTGCATTTACTGGAAGCAATGCAACAGGGATCAGGA
TAATGGCTGCTGCAGCTCCGATGGTCAAGCCTGTTTCTTTGGAGCTGGGA
GGAAAAAGTCCAATCATTGTGTTTGAGGATGTTGATCTAGATAAAGCGGT
TGAGTGGACCATCTTTTGGTTGCTTTTGGACAAATGGTCAAATCTGTAGT
GCAACATCTCGCCTTCTTGTGCACGAAAGCATTGCAGCAAATTTTTTAAA
AAGGATGGTTGAAGGGAATCCAAAACATTAAGATTTCCGATTCCCTGGAA
GAAAGTTGCAAATTTGGTCCTGTTGTTAGCGAAGGGCAGTATGAAAAAAT
TTTGAAATTTCTTTCAAATGGCAAAAACGAAGGGGCACCATTTTTGGTGG
GGGGGGGCCCTCCGGGACCTTTTGAAAAAGGGGATTTTTTGAAAAAACCA
ACCCTCCAAAACGTGGAATTACGCACAACTAAAGGGAAAATTTTGGGAAA
AAAAAAAGATTTTTTTGGGGAACCTGTTTTTTTGGGTGGTGTTAGGAGGG
GGTTTTTTTCCCC
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