DY258207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.636e-31 Identity = 70/165 (42.42%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +S+ + W++E+ ++ S ++ LVGNK+DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.636e-31 Identity = 70/165 (42.42%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +S+ + W++E+ ++ S ++ LVGNK+DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.055e-31 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK N+ F +A+ Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLAR 167
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.055e-31 Identity = 70/172 (40.70%), Postives = 107/172 (62.21%), Query Frame = 3 Query: 240 GSSDAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKV-TVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 G D ++ K++L+GDSGVGK+C+++RF G F + + TVG F ++ + + D VK +IWDTAGQER+ ++ YYR YD+T+ SF+ Q W+ E+Q+H D+V+ L+GNK D ++R V +D + A+ G+ F+ETSAKT N++ F IAK L Sbjct: 55 GGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDV-DGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKEL 225
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.055e-31 Identity = 70/165 (42.42%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +S+ + W++E+ ++ S ++ LVGNK+DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRM 173
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 6.055e-31 Identity = 70/165 (42.42%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLF----EEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +TI L D T+K +IWDTAGQER+ + YYRG YD+T +S+ + W++E+ ++ S ++ LVGNK+DL K+ V E+A+ G+ F+ETSAK A N+ Q F EI KR+ Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL-DGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 173
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.908e-31 Identity = 66/161 (40.99%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAKRL 752 KL+L+GDSGVGKSC++LRF + + T+G F +T+ L D +K +IWDTAGQER+ + YYRG YD+T +SFN + W+ E+ ++ S ++ LVGNK+DL K+ V +A++ G+ F+ETSAK A N+ Q F +A + Sbjct: 10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVEL-DGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 7.908e-31 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK N+ F +A+ Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 134.806 bits (338), Expect = 7.908e-31 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK N+ F +A+ Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167
BLAST of DY258207 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 7.908e-31 Identity = 65/159 (40.88%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 270 KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGXXXXXXXYDITSPDSFNKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPAQDGIEYAEKNGMFFIETSAKTADNINQLFEEIAK 746 KL+L+GDSGVGK+C++ RF F+ T T+G F +TI L D +K +IWDTAGQER+ + YYRG YDIT+ SF+ + W++ +++H S D+ ++GNK D+++KR+V + G + A G+ F+ETSAK N+ F +A+ Sbjct: 10 KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIEL-DGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLAR 167 The following BLAST results are available for this feature:
BLAST of DY258207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258207 ID=DY258207; Name=DY258207; organism=Citrus clementina; type=EST; length=1033bpback to top |