DY258239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_RALSO (Chaperone protein clpB OS=Ralstonia solanacearum GN=clpB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.976e-22 Identity = 47/99 (47.47%), Postives = 68/99 (68.69%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF LD+ I SI R+QL R+ R+A + ++++D A+ L S GYDP +G RP+KR IQQ +EN +A+ IL G F +D + +D Sbjct: 751 FRPEFLNRIDEVVVFHALDQGHIESIARIQLQRLAARLAHMDLTLEISDPAVAKLASAGYDPVFGARPLKRAIQQQIENPVARMILEGRFTPKDVVPVD 849
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_AQUAE (Chaperone protein clpB OS=Aquifex aeolicus GN=clpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.580e-22 Identity = 56/136 (41.18%), Postives = 91/136 (66.91%), Query Frame = 3 Query: 24 RPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQ---LPQQKLVFRRLDTSSDASAADNQEA 422 RPEF+NR+DE IVF+PL ++S I+ L + V KR+A+R +K+++T+ A + L GYDP +G RP+KR IQ+YVE LA I+RGE KD T+V+D + +G+ +P+++ ++ + S AS+ + +E+ Sbjct: 878 RPEFINRIDEIIVFKPLTMRELSKIIDLLIANVNKRLAERNIKIELTEEAKKELVRRGYDPAFGARPLKRTIQKYVETPLADKIIRGEIKDGMTVVVD-----YKDGEFVFIPKEEYEKQKAEVS--ASSEEKKES 1006
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_CHRVO (Chaperone protein clpB OS=Chromobacterium violaceum GN=clpB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.370e-22 Identity = 50/110 (45.45%), Postives = 73/110 (66.36%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQL 350 FRPEF+NR+DE +VF LD I SI R+QL ++ R+A ++ +Q++D A+ LL G+DP YG RP+KR IQ +EN LAK IL G++ + T++++ NGQL Sbjct: 752 FRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQISDEALALLSEAGFDPVYGARPLKRAIQAELENPLAKAILAGKYPPKATVMVEAR-----NGQL 856
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_YERPE (Chaperone protein clpB OS=Yersinia pestis GN=clpB PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.401e-22 Identity = 48/107 (44.86%), Postives = 71/107 (66.36%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 D FRPEF+NR+DE +VF PL R ++SI +QL+R+ KR+ +R ++++T A++ LG G+DP YG RP+KR IQQ +EN LA+ IL G+ + +D E Sbjct: 743 DVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEVKITQPALEFLGEAGFDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGIPVTLDVE 849
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_NITEU (Chaperone protein clpB OS=Nitrosomonas europaea GN=clpB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.748e-22 Identity = 50/113 (44.25%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 12 RSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQL 350 ++ FRPEF+NR+DE +VF L I SI R+QL + KR+A +MK+ V++ A+ L +G+DP +G RP+KR IQ +EN LAK +L G F DTI+++ +SNG + Sbjct: 750 KTYFRPEFINRIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVSEPALTKLAEVGFDPVFGARPLKRAIQAQIENPLAKELLEGHFSAGDTILVE-----YSNGHM 857
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_THET8 (Chaperone protein clpB OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=clpB PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 46/99 (46.46%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF+PL ++QI IV +QL ++ R+A++++ +++T+AA L GYDP +G RP++RVIQ+ +E LA+ IL GE K+ D + +D Sbjct: 740 FRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_THET2 (Chaperone protein clpB OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=clpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 46/99 (46.46%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 FRPEF+NR+DE +VF+PL ++QI IV +QL ++ R+A++++ +++T+AA L GYDP +G RP++RVIQ+ +E LA+ IL GE K+ D + +D Sbjct: 740 FRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVD 838
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 45/105 (42.86%), Postives = 75/105 (71.43%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 317 + RS F+PEF+NR+D+ +VF L ++++S I RLQ++ + +R+A+R++ ++VTD A+ L G DP YG RP++R++Q + + LA+ IL GE KD DT+ +D Sbjct: 745 EVVRSSFKPEFLNRLDDLVVFSALSQEELSRIARLQINGLARRLAERRLTLEVTDEALAWLAEEGNDPAYGARPLRRLVQTAIGDRLAREILSGEIKDGDTVRVD 849
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_PSEPK (Chaperone protein clpB OS=Pseudomonas putida (strain KT2440) GN=clpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 48/107 (44.86%), Postives = 74/107 (69.16%), Query Frame = 3 Query: 3 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 323 DA + FRPEF+NR+DE +VF+PL R+QI+ I +QL R++ R+ +R++ + ++ A+ L ++GYDP YG RP+KR IQ+++EN LA+ IL G+F I E Sbjct: 741 DAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILAGKFLPGTAITAKVE 847
BLAST of DY258239 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.507e-22 Identity = 46/92 (50.00%), Postives = 72/92 (78.26%), Query Frame = 3 Query: 21 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKD 296 FRPEF+NR+DE +VF+PL R+QI++IV++QL+ V+KR+A+R++ ++++ A+ L GYDP +G RP+KRVIQ+ +E L++ IL GE D Sbjct: 740 FRPEFLNRLDEIVVFRPLAREQIAAIVQIQLEAVRKRLAERRITLELSQEALDFLAQRGYDPVFGARPLKRVIQRELETPLSRKILAGEVAD 831 The following BLAST results are available for this feature:
BLAST of DY258239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258239 ID=DY258239; Name=DY258239; organism=Citrus clementina; type=EST; length=587bpback to top |