DY258241

Overview
NameDY258241
Unique NameDY258241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1143
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10094 contig Ccv1_Contig10094:4..1146. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_FRATF (Catalase-peroxidase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=katG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 90/368 (24.46%), Postives = 134/368 (36.41%), Query Frame = 2
Query:   62 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---------------PER------------------------SGFDGPWTREPLKFDNSYFVELLN--------------------------------GESEGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPGS 802
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H               P++                        SG +G WT  P  +++ +   L N                                G     +   TD AL ED  F +Y   +  + + F  ++A +  KL+     P S
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTHGAVPEDKVKQAIGPAPDKAPIEQQGLGWHNSYGTGNGDDTMGSGLEGSWTSTPTFWNHDFLHNLYNLDWKKTLSPAGAHQWTPTNAKPENMVPDAHKLGVKHKPIMFTTDLALKEDDGFNKYTQEFYNNPEEFKEEFAKAWFKLTHRDMGPKS 423          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_FRAT1 (Catalase-peroxidase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=katG PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 90/368 (24.46%), Postives = 134/368 (36.41%), Query Frame = 2
Query:   62 ALPVVDTEYLKEIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---------------PER------------------------SGFDGPWTREPLKFDNSYFVELLN--------------------------------GESEGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPGS 802
            A   +DTE LK      +D++ L+          + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H               P++                        SG +G WT  P  +++ +   L N                                G     +   TD AL ED  F +Y   +  + + F  ++A +  KL+     P S
Sbjct:   62 AFKKLDTEQLK------KDMQDLLTQSQDWWPADFGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTHGAVPEDKVKQAIGPAPDKAPIEQQGLGWHNSYGTGNGDDTMGSGLEGSWTSTPTFWNHDFLHNLYNLDWKKTLSPAGAHQWTPTNAKPENMVPDAHKPGVKHKPIMFTTDLALKEDDGFNKYTQEFYNNPEEFKEEFAKAWFKLTHRDMGPKS 423          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPN (Catalase-peroxidase 2 OS=Legionella pneumophila GN=katG2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 571
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPH (Catalase-peroxidase 2 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=katG2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 571
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPC (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Corby) GN=katG2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 571
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPA (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Paris) GN=katG2 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.487e-14
Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 571
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K+G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGPEGKWLESKRQDKDGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_FRAP2 (Catalase-peroxidase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=katG PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.948e-14
Identity = 84/334 (25.15%), Postives = 120/334 (35.93%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKDS--------KISP--------KEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---PER------------------------------------SGFDGPWTREPLKFDNSYFVELLN--------------------------------GESEGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPGS 802
            + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          ISP        K+G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H   PE+                                    SG +G WT  P  +++ +   L N                                G     +   TD AL ED  F +Y   +  +   F  ++A +  KL+     P S
Sbjct:   88 FGNYGPFFIRLSWHDAGTYRLADGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGISPEQLMSSNVKDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTHGAVPEKDIKKDIGPAPDKAPIEQQGLGWHNSYGTGMGDDTMGSGLEGSWTSTPTFWNHDFLHNLYNLNWEKTLSPSGAHQWTPTNAKPENMVPDAHKPGVKHKPIMFTTDLALKEDDGFNKYTQEFYNNPQEFKEEFAKAWFKLTHRDMGPKS 421          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_FRATN (Catalase-peroxidase OS=Francisella tularensis subsp. novicida (strain U112) GN=katG PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.015e-13
Identity = 82/334 (24.55%), Postives = 121/334 (36.23%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPN-GSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKDS--------KISPKE--------GRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---------------PER------------------------SGFDGPWTREPLKFDNSYFVELLN--------------------------------GESEGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPGS 802
            + N  P  +RL+WHDAGTY +    GG N G  R     S   N  L  A      +K K+   ++++DL  LAG V++E  G   + F  GR+D          +SP+E        G+L                      PD K  A  +R  F  MG++DK+ VAL +GGHT G+ H               P++                        SG +G WT  P  +++ +   L N                                G     +   TD AL ED  F +Y   +  + + F  ++A +  KL+     P S
Sbjct:   88 FGNYGPFFIRLSWHDAGTYRIYDGRGGANRGQQRFSPLNSWPDNVNLDKARQLLWPIKQKYGDAVSWSDLIVLAGTVSLESMGMKPIGFAFGREDDWQGDDTNWGLSPEEIMSSNVRDGKLAPAYAATQMGLIYVNPEGPDGKPDIKGAASEIRQAFRAMGMTDKETVALIAGGHTFGKTHGAVPEDKVKEAIGPAPDKAPIEQQGLGWHNSYGTGNGDDTMGSGLEGSWTSTPTFWNHDFLHNLYNLNWKKTLSPAGAHQWTPTNAKPENMVPDAHKLGVKHKPIMFTTDLALKEDDGFNKYTQEFYNNPEEFKEEFAKAWFKLTHRDMGPKS 421          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_LEGPL (Catalase-peroxidase 2 OS=Legionella pneumophila (strain Lens) GN=katG2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.015e-13
Identity = 61/187 (32.62%), Postives = 83/187 (44.39%), Query Frame = 2
Query:  137 YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGSI-RNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPERSG 571
            Y N  P+ +R++WH AGTY +    GG NG   R   + S   N  L  A      +K K+  KI++ADL  LAG VA+E  G  T+ F  GR+D                 SK   K G+L                      PD    A  +R+ F RM ++D++ VAL +GGH  G+ H   SG
Sbjct:   95 YGNYGPLFIRMSWHAAGTYRIYDGRGGANGGFQRFAPQNSWPDNANLDKARRLLWPIKQKYGRKISWADLLVLAGNVAMESMGFKTIGFAGGREDAWEAININWGTEGKWLESKRQDKVGKLEKPLAATVMGLIYVNPEGPNGVPDPLAAAEKIRETFGRMAMNDEETVALIAGGHAFGKTHGAASG 281          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_THELT (Catalase-peroxidase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=katG PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.260e-13
Identity = 78/283 (27.56%), Postives = 113/283 (39.93%), Query Frame = 2
Query:   77 DTEYLKEI-----DKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGG-PNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD------------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH---PER--------------------------------SGFDGPWTREPLKFDNSYFVELLNGESE 649
            D +YLKE+     D    DL+ L+          + +  P+ +RL+WH AG+Y ++   GG  NGSIR     +   N  L  A+     +K K+  K+++ADL  LAG VA++  G   + F  GR+D                   K   KEG L                      PD    A  +R  F RMG++D++ VAL +GGH+ G+ H   P +                                SGF+  W+ +P KF   Y   LL  E E
Sbjct:   39 DYDYLKEVKTLDVDAVIEDLKKLMKTSQDWWPADFGHYGPLFIRLSWHSAGSYRIHDGRGGAKNGSIRFPARINWPDNINLDKAIRLLWPIKKKYGKKLSWADLIILAGTVALQDMGVKILGFSLGREDVFEADESPDWGAEQEMLSGKERFKEGELEKPFAATEMGLIYVNPEGPMGNPDPSGSAKEIRLAFTRMGMNDEETVALIAGGHSFGKCHGAGPSKDLGPDPSSSPIEQMGLGWKYTYKTGKASDTYTSGFEVIWSSKPTKFGIQYLKFLLEFEWE 321          
The following BLAST results are available for this feature:
BLAST of DY258241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
KATG_FRATF3.487e-1424.46Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG_FRAT13.487e-1424.46Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG2_LEGPN3.487e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila GN... [more]
KATG2_LEGPH3.487e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila su... [more]
KATG2_LEGPC3.487e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG2_LEGPA3.487e-1432.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_FRAP25.948e-1425.15Catalase-peroxidase OS=Francisella philomiragia su... [more]
KATG_FRATN1.015e-1324.55Catalase-peroxidase OS=Francisella tularensis subs... [more]
KATG2_LEGPL1.015e-1332.62Catalase-peroxidase 2 OS=Legionella pneumophila (s... [more]
KATG_THELT2.260e-1327.56Catalase-peroxidase OS=Thermotoga lettingae (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DB05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258241 ID=DY258241; Name=DY258241; organism=Citrus clementina; type=EST; length=1143bp
GAAAACCAACGACAGCTGTCGTAAACTGTCAAAAGGTCGTTACACAGAAG
GAGCTCCGATGGCTTTACCGGTCGTTGACACAGAGTACCTGAAGGAGATC
GACAAGGCTCGTCGCGATCTTCGCGCTCTTATCGCTTACAAGAACTGTGC
TCCAATCATGCTCCGTCTAGCGTGGCACGACGCGGGAACATATGACGTGA
ACACGAAGACTGGTGGACCAAATGGCTCGATAAGGAACGAAGAGGAGTAC
TCTCATGGCTCCAACAATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGA
AGTGAAGGCTAAACATCCAAAAATAACATATGCAGACCTATACCAGCTTG
CGGGTGTTGTTGCAGTTGAGGTCACTGGAGGTCCTACAGTCGACTTTTTT
CCTGGTAGAAAGGATTCAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGA
TGCCAAACGAGGTGCACCTCATCTGAGGGATATCTTTTATCGGATGGGTC
TGTCTGACAAGGATATAGTGGCACTCTCAGGGGGCCATACTTTGGGAAGG
GCACATCCAGAGAGATCAGGTTTTGACGGCCCTTGGACCAGGGAGCCGCT
GAAATTTGATAACTCATACTTTGTGGAGTTGCTGAATGGGGAATCAGAAG
GATTACTGCAACTTCCAACAGACAAGGCTTTATTAGAAGACCCTGAGTTC
CGTCGTTATGTTGTGTTGTATGCAAAGGATGAGGATGCATTCTTTAGAGA
TTATGCAGCATCACATAAGAAACTTTCAGAGCTAGGGTTTTCACCCGGTT
CTGGCTCCAAATCAACAGCAAATGATTGCACCATATTGGCTCAAGGTGCA
GTTGGAGTAGCGGTTACTGCGGGAGTGGTGATTCTAAGCTACTTTTAACA
AGTTTCGCAAAGGATGAAGTGAAACAGATTACTCAAATTTGAATTTGGTT
TACTATACCACCAGTTATTTGCTAGGGAATTTAGCCAGAAATTTGCCCGC
CCCAGGTGCTGCCAAGTTCTTATTATTCCCGAAAGTACCCGGGGCAAGAA
AAAAATTTTAAAAATGGCGCTTTTTACTCCGGGTCCAAACCCCGGGTCAG
CCCCCCAAAAATTCATAAAAACGAATGGTCTTTTTTAAAACTT
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