DY258241

Overview
NameDY258241
Unique NameDY258241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1143
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10094 contig Ccv1_Contig10094:4..1146. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_ALTMD (Catalase-peroxidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=katG PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.856e-13
Identity = 87/364 (23.90%), Postives = 132/364 (36.26%), Query Frame = 2
Query:   77 DTEYLK-----EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTY-DVNTKTGGPNGSIRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD-----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAHPER------------------------------------SGFDGPWTREPLKFDNSYFVELLNGE------SEGLLQ-LPTDK-------------------------ALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSP 796
            D +Y K     ++D+ + D+  L+          + N  P  +RL+WH AGTY  ++ + GG  G +R +   S   N  L  A      +K K+   +++ DL  LAG V +E  G  T  F  GR D                 S    +EG+L                      PD    A ++R  F RM ++D++ VAL +GGHT G+ H                                       SG +G WT+ P K+ + Y   LL  E        G +Q +PTD+                         AL  DPE+R+    +  D   +   +A +  KL+     P
Sbjct:   91 DFDYAKAFSKLDLDQVKSDINELLTTSQDWWPADFGNYGPFFIRLSWHSAGTYRTLDGRGGGDGGQMRFDPLNSWPDNGNLDKARRLLWPIKQKYGESLSWGDLMILAGTVGMENMGFDTYGFAGGRTDDWEPDMVYWGPEVEMLASDREEREGKLQRPLGATHMGLIYVNPEGPKGVPDPMGSAKNIRTAFARMAMNDEETVALIAGGHTFGKMHGAHKPADCLEAEPGGAGLEEQGLGWKNNCGKGNAEDTVTSGLEGAWTQLPTKWTSLYLQNLLGFEWKQTRSPAGAIQWVPTDESLHTSVPDAHVEGKKNPPVMTTADLALKYDPEYRKIAERFLADPKEYQTAFAKAWFKLTHRDMGP 454          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG_ROSDO (Catalase-peroxidase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=katG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.589e-13
Identity = 72/254 (28.35%), Postives = 101/254 (39.76%), Query Frame = 2
Query:  155 IMLRLAWHDAGTYDVNTKTGGP-NGSIRNEEEYSHGSNNGLKIALDFCEEVKAKHPK-ITYADLYQLAGVVAVEVTG--------------GPTVDFFPGRKDSKISPKEGRL-------------------------------PDAKRGAPHLRDIFYRMGLSDKDIVALS-GGHTLGRAH-----------PE------------------------RSGFDGPWTREPLKFDNSYFVELLNGESEGLLQLP 667
            +M+RLAWH AGTY +    GG  +G+IR     S   N  L  A      VK K+   +++ADL  L+G +A E  G              GP  D + G ++  ++P E R                                PD  R A H+R+ F RM + D++  AL+ GGHT+G+AH           PE                         SG +G WT  P ++D  YF +LL G    L + P
Sbjct:   92 LMIRLAWHSAGTYRMQDGRGGAGSGNIRFAPLNSWPDNASLDKARRLLWPVKKKYGNALSWADLIILSGNMAYESMGLKTFGFGFGREDIWGPETDVYWGSENEWLAPSENRYGDLDDASTLENPLAAVHMGLIYVNPEGVNGQPDPARTAQHVRETFARMAMDDEETAALTCGGHTVGKAHGRGAVDNIGVEPEAAGIEAQGFGWSNPRHDGKATNAFTSGIEGAWTTHPTQWDMGYF-KLLFGYEWQLTKSP 344          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.913e-12
Identity = 64/200 (32.00%), Postives = 87/200 (43.50%), Query Frame = 2
Query:  323 ITYADLYQLAGVVAVEVTGGPTVDFFPGRKDSKISPKEGRLP---DAKRGAPHLRDIFYRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTRE--------PLKFDNSYFVELLNGES------------------------------EGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPG 799
            ++ AD+  LA   AVE  GGP V+   GR+D K S      P   D       + D F   GLS +D+V LSG HT+G +H   + F+G + R+            DNSY   L+N  S                              +GL Q  TD AL+ED   R  V   A DE++FF+ ++ S  KLS +G   G
Sbjct:  118 VSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQDLVVLSGAHTIGASH--CNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQ--TDSALMEDNRTRTMVEELASDEESFFQRWSESFVKLSMVGVRVG 313          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_BURCM (Catalase-peroxidase 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=katG2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.499e-12
Identity = 72/266 (27.07%), Postives = 102/266 (38.35%), Query Frame = 2
Query:   95 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELL 634
            +I+  ++D+RA +          Y N  P  +R+AWH AGTY      GG  G+  R E   S   N  L  A      +K K+   I++ DL  L G VA+E  G  T  F  GR+D                S    K G+L                      PD    A  +RD F RM ++D++ +AL +GGHT G+AH    P++                                SG +G W+ +P+ F   Y   LL
Sbjct:   72 DIEAVKKDIRATLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRGGAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGENISWGDLMVLTGNVALESMGFQTFGFGGGREDDWQSDLVYWGAGTKFMSNNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDPVAAAKDIRDAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGAAPAGAGVEAQGLGWANKCGTGKGADTITSGLEGAWSVDPVHFTMQYLDNLL 337          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: PEM4_PHACH (Manganese peroxidase H4 OS=Phanerochaete chrysosporium PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.496e-12
Identity = 69/274 (25.18%), Postives = 119/274 (43.43%), Query Frame = 2
Query:  113 RDLRALIAYKNC---APIMLRLAWHDAGTYDVNTKT---GGPNGSIRNEE--EYSHGSNNGLKIALDFCEEVKAKHPKITYADLYQLAGVVAV-EVTGGPTVDFFPGRKDSKISPKEGRLPDAKRGAPHLRDIFYRMG-LSDKDIVALSGGHTLGRAHPERSGFD-GPWTREPLKFDNSYFVELL-----------------------NGESEGLLQLPTDKALLEDPEFRRYVVLYAKDEDAFFRDYAASHKKLSELGFSPGSGSKSTANDCT 832
            +DL+  +   +C   A  ++RL +HDA     +      GG +GS+ +    E +  +N+G+  +++       KH  I+ ADL Q AG VA+    G P ++F  GR ++ I   EG +P+ +     +   F   G  S  ++V+L   HT+ RA       D  P+   P  FD   F+E+L                       +G   G ++L +D AL  D     +   +  +++     + A+  KL+ LG      S+S+  DC+
Sbjct:   46 QDLQETLFQGDCGEDAHEVIRLTFHDAIAISQSLGPQAGGGADGSMLHFPTIEPNFSANSGIDDSVNNLLPFMQKHDTISAADLVQFAGAVALSNCPGAPRLEFMAGRPNTTIPAVEGLIPEPQDSVTKILQRFEDAGNFSPFEVVSLLASHTVARADKVDETIDAAPFDSTPFTFDTQVFLEVLLKGTGFPGSNNNTGEVMSPLPLGSGSDTGEMRLQSDFALARDERTACFWQSFVNEQEFMAASFKAAMAKLAILGH-----SRSSLIDCS 314          
BLAST of DY258241 vs. ExPASy Swiss-Prot
Match: KATG2_BURA4 (Catalase-peroxidase 2 OS=Burkholderia ambifaria (strain MC40-6) GN=katG2 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.496e-12
Identity = 71/266 (26.69%), Postives = 102/266 (38.35%), Query Frame = 2
Query:   95 EIDKARRDLRALIA---------YKNCAPIMLRLAWHDAGTYDVNTKTGGPNGS-IRNEEEYSHGSNNGLKIALDFCEEVKAKH-PKITYADLYQLAGVVAVEVTGGPTVDFFPGRKD----------------SKISPKEGRL----------------------PDAKRGAPHLRDIFYRMGLSDKDIVAL-SGGHTLGRAH----PER--------------------------------SGFDGPWTREPLKFDNSYFVELL 634
            +I+  ++D+RA +          Y N  P  +R+AWH AGTY      GG  G+  R E   S   N  L  A      +K K+   I++ DL  L G VA+E  G  T  F  GR+D                S    K G+L                      PD    A  +R+ F RM ++D++ +AL +GGHT G+AH    P++                                SG +G W+ +P+ F   Y   LL
Sbjct:   72 DIEAVKKDIRATLTTSQDWWPADYGNYGPFFIRMAWHGAGTYRTYDGRGGAGGAQQRFEPLNSWPDNANLDKARRLLWPIKKKYGQNISWGDLMVLTGNVALESMGFQTFGFGGGREDDWQSDLVYWGAGTKFMSDNRDKNGKLEKPLAATQMGLIYVNPEGPNGNPDPVAAAKDIREAFGRMAMNDEETLALIAGGHTFGKAHGAASPDKCVGAAPAGAGVEAQGLGWANKCGTGKGADTITSGLEGAWSVDPVHFTMQYLDNLL 337          
The following BLAST results are available for this feature:
BLAST of DY258241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 76
Match NameE-valueIdentityDescription
KATG_ALTMD3.856e-1323.90Catalase-peroxidase OS=Alteromonas macleodii (stra... [more]
KATG_ROSDO8.589e-1328.35Catalase-peroxidase OS=Roseobacter denitrificans (... [more]
PER46_ARATH1.913e-1232.00Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
KATG2_BURCM2.499e-1227.07Catalase-peroxidase 2 OS=Burkholderia ambifaria (s... [more]
PEM4_PHACH9.496e-1225.18Manganese peroxidase H4 OS=Phanerochaete chrysospo... [more]
KATG2_BURA49.496e-1226.69Catalase-peroxidase 2 OS=Burkholderia ambifaria (s... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3DB05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258241 ID=DY258241; Name=DY258241; organism=Citrus clementina; type=EST; length=1143bp
GAAAACCAACGACAGCTGTCGTAAACTGTCAAAAGGTCGTTACACAGAAG
GAGCTCCGATGGCTTTACCGGTCGTTGACACAGAGTACCTGAAGGAGATC
GACAAGGCTCGTCGCGATCTTCGCGCTCTTATCGCTTACAAGAACTGTGC
TCCAATCATGCTCCGTCTAGCGTGGCACGACGCGGGAACATATGACGTGA
ACACGAAGACTGGTGGACCAAATGGCTCGATAAGGAACGAAGAGGAGTAC
TCTCATGGCTCCAACAATGGCTTGAAAATCGCTCTTGATTTTTGTGAGGA
AGTGAAGGCTAAACATCCAAAAATAACATATGCAGACCTATACCAGCTTG
CGGGTGTTGTTGCAGTTGAGGTCACTGGAGGTCCTACAGTCGACTTTTTT
CCTGGTAGAAAGGATTCAAAAATTTCTCCCAAGGAAGGGCGTCTTCCAGA
TGCCAAACGAGGTGCACCTCATCTGAGGGATATCTTTTATCGGATGGGTC
TGTCTGACAAGGATATAGTGGCACTCTCAGGGGGCCATACTTTGGGAAGG
GCACATCCAGAGAGATCAGGTTTTGACGGCCCTTGGACCAGGGAGCCGCT
GAAATTTGATAACTCATACTTTGTGGAGTTGCTGAATGGGGAATCAGAAG
GATTACTGCAACTTCCAACAGACAAGGCTTTATTAGAAGACCCTGAGTTC
CGTCGTTATGTTGTGTTGTATGCAAAGGATGAGGATGCATTCTTTAGAGA
TTATGCAGCATCACATAAGAAACTTTCAGAGCTAGGGTTTTCACCCGGTT
CTGGCTCCAAATCAACAGCAAATGATTGCACCATATTGGCTCAAGGTGCA
GTTGGAGTAGCGGTTACTGCGGGAGTGGTGATTCTAAGCTACTTTTAACA
AGTTTCGCAAAGGATGAAGTGAAACAGATTACTCAAATTTGAATTTGGTT
TACTATACCACCAGTTATTTGCTAGGGAATTTAGCCAGAAATTTGCCCGC
CCCAGGTGCTGCCAAGTTCTTATTATTCCCGAAAGTACCCGGGGCAAGAA
AAAAATTTTAAAAATGGCGCTTTTTACTCCGGGTCCAAACCCCGGGTCAG
CCCCCCAAAAATTCATAAAAACGAATGGTCTTTTTTAAAACTT
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