DY258242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 89/196 (45.41%), Postives = 131/196 (66.84%), Query Frame = 2 Query: 203 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 +YD+LFK++LIG++ VGK+CL+ RF + +TIGVDF I+TVE++G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T ESF + WL EI++YA++ V +LV NK DL E + V Q A+ F++ + +LETSAK++ NVE+ FL +A + + N S + +G+ I + C Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 89/196 (45.41%), Postives = 131/196 (66.84%), Query Frame = 2 Query: 203 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 +YD+LFK++LIG++ VGK+CL+ RF + +TIGVDF I+TVE++G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T ESF + WL EI++YA++ V +LV NK DL E + V Q A+ F++ + +LETSAK++ NVE+ FL +A + + N S + +G+ I + C Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 3.134e-44 Identity = 89/196 (45.41%), Postives = 131/196 (66.84%), Query Frame = 2 Query: 203 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 +YD+LFK++LIG++ VGK+CL+ RF + +TIGVDF I+TVE++G+ +KLQIWDTAGQERFR+IT SYYR A+ +I+ YD+T ESF + WL EI++YA++ V +LV NK DL E + V Q A+ F++ + +LETSAK++ NVE+ FL +A + + N S + +G+ I + C Sbjct: 5 DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCC 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB19_BOVIN (Ras-related protein Rab-19 OS=Bos taurus GN=RAB19 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 4.093e-44 Identity = 83/197 (42.13%), Postives = 133/197 (67.51%), Query Frame = 2 Query: 185 SKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELG-IPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPI 772 ++ + +DYLFK++LIGDS+VGK+C++ F Y+++ +TIGVDF +R +E+DGK +K+Q+WDTAGQERFRTIT SYYR AH II YD+T +F +V W++EI++Y ++ +L+ NKCDL E + V + A A++ G + LETSAK++ N+++ F+ MA E+ + + G++ ++ P+ Sbjct: 7 ARTVDENFDYLFKIILIGDSNVGKTCVVQHFKSGVYMEAQQNTIGVDFTVRALEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKCDLWEKRHVLFEDACILAEKYGLLAVLETSAKESKNIDEVFVLMARELMARHSLPLYGEGAPGSLPLESTPV 203
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 86/196 (43.88%), Postives = 134/196 (68.37%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGI-PFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 YD+LFKL+L+GD+SVGK+C++ RF ++ STIGVDF ++T+E+ GK +KLQIWDTAGQERFRTIT SYYR A+G I+ YD+++ +F +V W+ ++ +YA ++ +LL+ NK DL + + V A++ A+ I +ETSAKD+ NVE+AF +A E+ + G + K++ +Q+ + I ++ C Sbjct: 13 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADLREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMRHGGPMFSEKNTDHIQLDSKDIAESWGC 208
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 86/196 (43.88%), Postives = 134/196 (68.37%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGI-PFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSNC 790 YD+LFKL+L+GD+SVGK+C++ RF ++ STIGVDF ++T+E+ GK +KLQIWDTAGQERFRTIT SYYR A+G I+ YD+++ +F +V W+ ++ +YA ++ +LL+ NK DL + + V A++ A+ I +ETSAKD+ NVE+AF +A E+ + G + K++ +Q+ + I ++ C Sbjct: 13 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLADFREVPLAEAQSLAEHYDILCAIETSAKDSSNVEEAFTRVATELIMRHGGPMFSEKNTDHIQLDSKDIAESWGC 208
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 95/212 (44.81%), Postives = 130/212 (61.32%), Query Frame = 2 Query: 206 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKK----------------KMGNQPTANKSSGTVQMKGQPIQQNSNCC 793 Y YLFK ++IGD+ VGKSCLLL+F D + + TIGV+F R + +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T ++FN++ WL + +++N ++ +L+ NK DL + V + +AFA E G+ F+ETSAK A NVE+AF+ A EI + K+G Q A +S GQ Q CC Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHAATNASHGSNQGGQ--QAGGGCC 212
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB15_RAT (Ras-related protein Rab-15 OS=Rattus norvegicus GN=Rab15 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 79/162 (48.77%), Postives = 119/162 (73.46%), Query Frame = 2 Query: 194 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF 679 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+ NK D + + V + + A E G+ F ETSA +N++++F Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB15_HUMAN (Ras-related protein Rab-15 OS=Homo sapiens GN=RAB15 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 79/162 (48.77%), Postives = 119/162 (73.46%), Query Frame = 2 Query: 194 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF 679 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+ NK D + + V + + A E G+ F ETSA +N++++F Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAKEYGMDFYETSACTNLNIKESF 162
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB15_BOVIN (Ras-related protein Rab-15 OS=Bos taurus GN=RAB15 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.981e-44 Identity = 84/194 (43.30%), Postives = 130/194 (67.01%), Query Frame = 2 Query: 194 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF-----LTMAGEIKKKMGNQPTANKSSGTVQMK 760 M+ +YD LF+LLLIGDS VGK+CLL RF D+ + S+ISTIGVDFK++T+E+DG +++QIWDTAGQER++TIT YYR A GI +VYD++ S+ ++ +W++++D YA + V K+L+ NK D + + V + + A E G+ F ETSA +N++++F L + K+ G + AN +++ Sbjct: 1 MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEYAPEGVQKILIGNKADEEQKRQVGREQGQQLAREYGMDFYETSACTNLNIKESFTRLTELVLQAHRKELEGLRTRANHELALAELE 194 The following BLAST results are available for this feature:
BLAST of DY258242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258242 ID=DY258242; Name=DY258242; organism=Citrus clementina; type=EST; length=930bpback to top |