DY258242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.317e-42 Identity = 94/199 (47.24%), Postives = 125/199 (62.81%), Query Frame = 2 Query: 200 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF---LTMAGEIKKKMGNQPTANKSSGTVQMKGQPIQQNSN 787 +EYDYLFKL+LIGDS VGKS LL RF + + STIGV+F +++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F RWL E+ + + ++ +L+ NK DL V T+ KAFA++ + F+ETSA +A NVE AF LT I K + S+ V +GQ I N + Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEAGDRPSTSVVPSQGQTINVNED 206
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 173.711 bits (439), Expect = 1.317e-42 Identity = 85/182 (46.70%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 209 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADEL-GIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTV 751 D+ ++++IG VGK+ L+ RF DD++ ++ ST+GVDFKI+TVEL GK I+LQIWDTAGQERF +ITS+YYR A GII+VYD+T+ E+F+++ +W+ ID+YA++ LLV NK D ++ + Q + FA ++ G+ F E SAKD NV++ FL + +I KKM N+ S ++ Sbjct: 40 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSI 221
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.317e-42 Identity = 89/195 (45.64%), Postives = 127/195 (65.13%), Query Frame = 2 Query: 194 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSGTVQM-KGQPIQ 775 + ++YDYLFK++LIGDS VGKS LL RF + + STIGV+F RT+++DGK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV RWL E+ + + ++ +LV NK DL V T+ K++A++ + F+ETSA +A NVE AF + +I + + G + KG+ I+ Sbjct: 6 VEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDGNASVPKGEKIE 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.933e-42 Identity = 90/192 (46.88%), Postives = 127/192 (66.15%), Query Frame = 2 Query: 200 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPT-ANKSSGTVQMKGQPI 772 ++YDYLFK++LIGDS VGKS LL RF + + STIGV+F R++++DGK +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV+RWL E+ + + ++ +LV NK DL V T KAFA+ + F+ETSA ++ NVE AF + +I + + + A +G+ KG+ I Sbjct: 9 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDAGSGPGKGEKI 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.831e-42 Identity = 93/194 (47.94%), Postives = 123/194 (63.40%), Query Frame = 2 Query: 200 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAF---LTMAGEIKKKMGNQPTANKSSGTVQMKGQPI 772 +EYDYLFKL+LIGDS VGKS LL RF + + STIGV+F +T+ +D K +K QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F N RWL E+ + + ++ +L+ NK DL V T+ K+FA+ + F+ETSA +A NVE AF LT I K + + SS + KGQ I Sbjct: 8 DEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPSKGQTI 201
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 5.003e-42 Identity = 92/192 (47.92%), Postives = 124/192 (64.58%), Query Frame = 2 Query: 200 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQP-TANKSSGTVQMKGQPI 772 +EYDYLFK++LIGDS VGKS LL RF + + STIGV+F R++ +D K IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV+ WL E+ + + ++ +LV NK DL V T+ AK+FA++ + F+ETSA +A NVE AF + +I + + A S V KG I Sbjct: 8 DEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASESANVPSKGDKI 199
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RB11A_DICDI (Ras-related protein Rab-11A OS=Dictyostelium discoideum GN=rab11A PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.534e-42 Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 2 Query: 179 LPSKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKM-------GNQPTANKSSGTVQM--KGQPIQQNSNCC 793 + SK EYDYL+K++LIGDS VGKS LL RF + + STIGV+F RT++ +GKTIK Q+WDTAGQER+R ITS+YYRGA G ++VYD+ + ++ +V+RW+ E+ A+ ++ +LV NK DL + V T AK F+++ + F+ETSA D+ NVE AF + +I M G Q T + ++ T+ + +P S CC Sbjct: 1 MTSKGSQEEYDYLYKIVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRTIQTEGKTIKAQVWDTAGQERYRAITSAYYRGAVGALLVYDIAKQATYKSVERWILELRENADRNIEIMLVGNKSDLRHLREVSTDEAKEFSEKHKLTFIETSALDSSNVELAFQNILTQIYHIMSRPSHSTGPQTTIDSNTETIILPTTSEPPAAKSGCC 214
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.534e-42 Identity = 84/183 (45.90%), Postives = 124/183 (67.76%), Query Frame = 2 Query: 197 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEIKKKMGNQPTANKSSG 745 S Y++LFK +++GDS+VGKS LLL+F D + + TIGV+F R++ ++ K IKLQIWDTAGQE+FR+IT +YYRGA +IVYD+T +SF ++ WL + ++++ V +L+ NK DL N+ V T AK FA++ G+ F ETSAK A+NV++AF +I KK+ + P + G Sbjct: 18 STSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNEG 200
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: RAB19_RAT (Ras-related protein Rab-19 OS=Rattus norvegicus GN=Rab19 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.534e-42 Identity = 81/173 (46.82%), Postives = 122/173 (70.52%), Query Frame = 2 Query: 185 SKIMSNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELG-IPFLETSAKDAINVEQAFLTMAGEI 700 ++ + DYLFK++LIGDS+VGK+C++ F Y +S +TIGVDF +R++E+DGK +K+Q+WDTAGQERFRTIT SYYR AH II YD+T +F +V W++EI++Y ++ +L+ NK DL E + V + A A++ G + LETSAK++ N+++ F+ MA E+ Sbjct: 7 ARTVDENVDYLFKVILIGDSNVGKTCVVQHFKSGVYSESQQNTIGVDFTVRSLEIDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLIGNKSDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESRNIDEVFVLMAKEL 179
BLAST of DY258242 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.534e-42 Identity = 80/164 (48.78%), Postives = 121/164 (73.78%), Query Frame = 2 Query: 209 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKRWLNEIDRYANDSVCKLLVWNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDAINVEQAFLTMAGEI 700 +YLFK+++IGDS+VGKS LL R+A + + + +TIGV+F+ +++ +DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T +F NV RWL+E++ +++ +V K+L+ NKCDL + V + K+ A+ G+ F+ETSA D+ NV+ AF + EI Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREI 173 The following BLAST results are available for this feature:
BLAST of DY258242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258242 ID=DY258242; Name=DY258242; organism=Citrus clementina; type=EST; length=930bpback to top |