DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.099e-41
Identity = 92/227 (40.53%), Postives = 141/227 (62.11%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRL--------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVK 851
            N++G+G  G VY+  + +G+++AVK+L         +E+T      F  EVK +    H+N++   G C     +LL+Y YM NGS+ S L ER+ S   LDW  R +I LG+A+GL+YLH  C P I+HRD+KA NIL+  +FE  + DFGLAKL+D  D    +  V G+ G+IAPEY  + + +EK+DV+ YG+++LE++TG++  D  +    E + L+D V+
Sbjct:  790 NVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERRGS--SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPIDPTV---PEGIHLVDWVR 1011          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RCH1_ARATH (LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.099e-41
Identity = 88/211 (41.71%), Postives = 135/211 (63.98%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKLVAVKRL---------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            N++G+G  G VYK  + + +++AVK+L         ++ ++SG    F  EVK +    H+N++   G C     +LL+Y YM+NGS+ S L ER S +  L W  R KI LG+A+GL+YLH  C P I+HRD+KA NIL+  +FE  +GDFGLAKL+D  D    +  + G+ G+IAPEY  + + +EK+DV+ YG+++LE++TG++  D
Sbjct:  789 NVIGKGCSGIVYKAEMPNREVIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMYDYMSNGSLGSLLHER-SGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILIGPDFEPYIGDFGLAKLVDDGDFARSSNTIAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLTGKQPID 998          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.047e-41
Identity = 91/218 (41.74%), Postives = 135/218 (61.93%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            +K F+   ++ ATDG++   ILG+GG G VYKG L D  +VA+K+ +    S  E QF  EV ++S   HRN++ L G C      LLVY ++++G++   L         L W  R +IA+  A  L+YLH +    IIHRDVK ANILLDE   A V DFG ++L+      +TT V GT+G++ PEY +TG  +EK+DV+ +G++L+EL++G++A
Sbjct:  393 VKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVE-QFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGSMFD-SSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIPMDQEQLTTMVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGEKA 608          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 5.286e-41
Identity = 92/215 (42.79%), Postives = 132/215 (61.40%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +F    L+ ATD FS+K +LG+GG G V+ G L +GK VAVKRL        E +F  EV +IS   H+NL+ L G      E LLVY Y+ N S+   L +   S   L+W  R  I LG+A GL+YLH     +IIHRD+K +N+LLD++    + DFGLA+      TH++T + GT+G++APEY+  G+ +EK DV+ +G+++LE+  G R
Sbjct:  302 KFKYETLEKATDYFSHKKMLGQGGNGTVFLGILPNGKNVAVKRLVFNTRDWVE-EFFNEVNLISGIQHKNLVKLLGCSIEGPESLLVYEYVPNKSLDQFLFDESQS-KVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTR 514          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 5.286e-41
Identity = 94/232 (40.52%), Postives = 144/232 (62.07%), Query Frame = 3
Query:   99 DVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            + PA D  ++    L+    R ++ AT+ FS  N +G+GGFG+VYKG  ++G  VAVKRL +  +  G+ +F+ EV +++   HRNL+ L GF     E++LVY YM N S+   L +  +    LDW  R K+  G ARG+ YLH+     IIHRD+KA+NILLD +    + DFGLA++     T   T+ + GT G++APEY   G+ S K+DV+ +G+++LE+I+G++
Sbjct:  309 NAPAFDGDDITTESLQ-LDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSKS-SGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFD-PAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKK 537          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.903e-41
Identity = 91/229 (39.74%), Postives = 136/229 (59.39%), Query Frame = 3
Query:  147 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENV 830
            R S  ELQ  T+ F    ++G GGFG V++G L D   VAVKR     +  G  +F +E+ I+S   HR+L+ L G+C   +E +LVY YM  G + S L    S+ PPL W  R ++ +G+ARGL YLH      IIHRD+K+ NILLD  + A V DFGL++     D TH++T V G+ G++ PEY    + ++K+DV+ +G++L E++  + A D  ++    N+
Sbjct:  476 RISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKR-GSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYG--STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPLLVREQVNL 701          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.903e-41
Identity = 90/220 (40.91%), Postives = 133/220 (60.45%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRE-RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +R   R+L VATDGF    I+G GGFG V+KG+L +   +AVK++      G   +F  E++ +    H+NL+ L G+C    + LL+Y Y+ NGS+ S L    + S   L W  R +IA G A GL YLHE  +  +IHRDVK +N+L+D +    +GDFGLA+L +      TTA+ GT+G++APE    G  S  +DVF +G++LLE++ G++  D
Sbjct:  353 RRLRYRDLYVATDGFKKTGIIGTGGFGTVFKGKLPNSDPIAVKKIIPSSRQGVR-EFVAEIESLGKLRHKNLVNLQGWCKHKNDLLLIYDYIPNGSLDSLLYTVPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEKIVIHRDVKPSNVLIDSKMNPRLGDFGLARLYERGTLSETTALVGTIGYMAPELSRNGNPSSASDVFAFGVLLLEIVCGRKPTD 571          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 6.903e-41
Identity = 100/249 (40.16%), Postives = 148/249 (59.44%), Query Frame = 3
Query:   51 IGFAYWRRTRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            +G   W+R + ++      A+D +    G L+ F  + ++ AT  F N N LG GGFG+VYKG   +G  VAVKRL   +TSG GE +F+ EV +++   HRNL+ L G+     EK+LVY ++ N S+   L +       LDW  R  I  G  RG+ YLH+     IIHRD+KA NILLD +    + DFG+A+      T  TTA V GT+G++ PEY++ G+ S K+DV+ +G+++LE+I G++
Sbjct:  270 LGVGLWKRRKAYKTKTTKIADDITTS--GSLQ-FEFKAIEAATCNFHNVNKLGHGGFGEVYKGTFPNGTEVAVKRLS--KTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKK-GQLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGTIGYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKK 512          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 6.903e-41
Identity = 96/232 (41.38%), Postives = 138/232 (59.48%), Query Frame = 3
Query:  105 PAE--DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT-AVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            PAE  D  ++      +F  + +  ATD F   N LG+GGFG+VYKG    G  VAVKRL +  +  GE +F+ EV +++   HRNL+ L G+C    EK+LVY ++ N S+   L +  +    LDW  R KI  G ARG+ YLH+     IIHRD+KA NILLD +    V DFG+A++     T   T  V GT G++APEY   G+ S K+DV+ +G+++LE+++G +
Sbjct:  315 PAETTDGDDITTAGSLQFDFKAIVAATDIFLPINKLGQGGFGEVYKGTFPSGVQVAVKRLSKN-SGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDYFLFD-PTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMK 544          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 9.016e-41
Identity = 94/244 (38.52%), Postives = 146/244 (59.84%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTE--KLLVYRYMANGSVASRLRERQSSLPP--LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DY-KDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVKGYPXREE 872
            ++  AT   + + ++G GG GKVYK  L +G+ +AVK++  +        F  EVK +    HR+L+ L G+C++  +   LL+Y YMANGSV   L   +++     L W TR KIALG A+G+ YLH  C P I+HRD+K++N+LLD   EA +GDFGLAK++  +Y  +T   T   G+ G+IAPEY  + +++EK+DV+  GI+L+E++TG+   +       + V  ++ V   P   E
Sbjct:  940 DIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSE 1183          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RCH2_ARATH3.099e-4140.53Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
RCH1_ARATH3.099e-4141.71LRR receptor-like serine/threonine-protein kinase ... [more]
WAK5_ARATH4.047e-4141.74Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
CRK42_ARATH5.286e-4142.79Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
CRK15_ARATH5.286e-4140.52Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
Y5241_ARATH6.903e-4139.74Probable receptor-like protein kinase At5g24010 OS... [more]
LRKA1_ARATH6.903e-4140.91Lectin-domain containing receptor kinase A4.1 OS=A... [more]
CRK24_ARATH6.903e-4140.16Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK20_ARATH6.903e-4141.38Putative cysteine-rich receptor-like protein kinas... [more]
GSO2_ARATH9.016e-4138.52LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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