DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRK2_SPOLA (Tyrosine-protein kinase SRK2 (Fragment) OS=Spongilla lacustris GN=SRK2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.401e-17
Identity = 76/233 (32.62%), Postives = 110/233 (47.21%), Query Frame = 3
Query:  168 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ---FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRVKGY 857
            +++ D  +    LG G FG+VY+G   +   VAVK LK      G +Q   F  E +I+    H  L+ L   CT      ++   M+ GS+   L   Q     L  P    +A   A G++YL  H     IHRD+ A NIL+ +     V DFGLA+L+   D + T      +   APE     R S K+DV+ +GI++ EL+T  R      ++N E +  LD  KGY
Sbjct:   89 EISRDSITLIRKLGAGQFGEVYQGLWNNSTPVAVKTLK-----AGTMQPAAFLAEAQIMKKLRHPKLIQLYAVCTQGEPVYIITELMSKGSLLDYL---QGEAGALKLPQLIDMAAQVAAGMAYLELH---NYIHRDLAARNILVGDNNICKVADFGLARLIVSDDYNATEGAKFPIKWTAPEAALFNRFSIKSDVWSFGILITELVTYGR-IPYPGMSNAEVLQNLD--KGY 307          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RIPK2_HUMAN (Receptor-interacting serine/threonine-protein kinase 2 OS=Homo sapiens GN=RIPK2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.401e-17
Identity = 66/209 (31.58%), Postives = 105/209 (50.24%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKL-VAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK--LMDYKDTHITTAV--HGTVGHIAPEYLSTG---RSSEKTDVFGYGIMLLELITGQRAFD 800
            L RG  G V   R AD ++ VAVK L                E +I+  A    +L + G C       +V  YM NGS+ + L  R++  P + WP R +I    A G++YLH +  P ++H D+K  NILLD EF   + DFGL+K  +M    +  + +    GT+ ++ PE    G   R+S K D++ Y ++  E+++ ++ F+
Sbjct:   24 LSRGASGTVSSARHADWRVQVAVKHLHIHTPLLDSERKDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSL-NELLHRKTEYPDVAWPLRFRILHEIALGVNYLH-NMTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPENYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFE 230          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA1_MOUSE (Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.401e-17
Identity = 62/199 (31.16%), Postives = 104/199 (52.26%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            ++G G FG+VY+G L     D K VA+K LK+    G    F  E  I+    H ++L L G  T     +++  +M NG++ + L+ER+  L P        + LG A G++ L  H     +HRD+ A NIL+++     V DFGL +L+ D+  T+ T      +   APE ++    +  +DV+ +GI++ E+++
Sbjct:  630 VIGEGEFGEVYRGALRLPSQDCKTVAIKTLKDTSPDGYWWNFLREATIMGQFNHPHILRLEGVITKRKPIMIITEFMENGALDAFLKEREDQLAP---GQLVAMLLGIASGMNCLSGH---NYVHRDLAARNILVNQNLCCKVSDFGLTRLLDDFDGTYETQGGKIPIRWTAPEAIAHRIFTTASDVWSFGIVMWEVLS 822          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA2_MACFA (Ephrin type-A receptor 2 OS=Macaca fascicularis GN=EPHA2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.389e-17
Identity = 63/211 (29.86%), Postives = 109/211 (51.66%), Query Frame = 3
Query:  189 SNKNILGRGGFGKVYKGRL--ADGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + + ++G G FG+VYKG L  + GK    VA+K LK   T    + F  E  I+    H N++ L G  +     +++  +M NG++   LRE+      L      +   G A G+ YL    +   +HRD+ A NIL++      V DFGL++++  D + T+ T+     +   APE +S  + +  +DV+ +GI++ E++T G+R +
Sbjct:  614 TRQKVIGAGEFGEVYKGTLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEFMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY 818          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.120e-17
Identity = 61/192 (31.77%), Postives = 97/192 (50.52%), Query Frame = 3
Query:  228 VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAV--HGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +YK R    K+V +   KEE  +  E QF++EV ++S   H N++     C       ++  YM+ G++   L +++     L   T  ++AL  +RG+ YLH      +IHRD+K+ N+LL++E    V DFG + L    +T    A    GT   +APE +     + K DV+ +GI+L EL T    F
Sbjct:  104 IYKQRAVAVKMVRIPTHKEETRAKLEQQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNKKEPY--SLSIETVLRLALDISRGMEYLHSQ---GVIHRDLKSNNLLLNDEMRVKVADFGTSCL----ETQCREAKGNMGTYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPF 286          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y1143_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g14390 OS=Arabidopsis thaliana GN=At1g14390 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.322e-17
Identity = 69/229 (30.13%), Postives = 112/229 (48.91%), Query Frame = 3
Query:  132 LGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK---------LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            L   + FSL EL+ AT+ F  +N+ G     ++YKG L +G  V V+ +K +++ S   L  Q EV  +S   H +L+ + G C    +           +V  Y++NGS+   L + +     L WP R  IA+G ARG+ +LH    P I   +++  N+LLDE            KL  Y     +  +   VG  +P    +    EK DV+ +G++L+++ITG+
Sbjct:  429 LSPYRVFSLEELEEATNNFDAENLCGE----QLYKGCLREGIAVTVRCIKLKQKNSTQNLAQQMEV--LSKLRHMHLVSVLGHCIGTYQDHHPYAGSTIFIVQEYISNGSLRDYLTDWRKK-EVLKWPQRMSIAIGVARGIQFLHTGVAPGIFGNNLEIENVLLDETL--------TVKLSGY-----SIPLPSKVGAESP----SNEDGEKEDVYQFGVILIQIITGK 633          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: TESK2_MOUSE (Dual specificity testis-specific protein kinase 2 OS=Mus musculus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.322e-17
Identity = 82/249 (32.93%), Postives = 122/249 (49.00%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVA------TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDEN 827
            D + +Q+G++   S R +  A       D F+ + I G G F +V+K R  A G+++A   LK    S        E+++++   H N+L   G C    +   +  Y+ +G++  +L +    LP   W  R K+A   A GLSYLH      I HRD+ + N L+  +   + AVV DFGLA K+ D        AV G+   +APE L     +EK DVF YGI+L E+I   +A D   L   EN
Sbjct:   29 DGNTVQVGRVSSSSYRAIISAFSRLTSLDDFTREKI-GSGFFSEVFKVRHRASGQVMA---LKMNTLSSNRANLLKEMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNL-EQLLDSDLYLP---WTVRVKLAYDIAVGLSYLHFK---GIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIPDASIGREKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEIIARIQA-DPDYLPRTEN 265          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RIPK4_HUMAN (Receptor-interacting serine/threonine-protein kinase 4 OS=Homo sapiens GN=RIPK4 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 5.322e-17
Identity = 75/246 (30.49%), Postives = 122/246 (49.59%), Query Frame = 3
Query:  186 FSNKNILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITT--AVHGTVGHIAPEYL--STGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVM--LLDRVKGYPXREEF*CTC**RP 899
            F+    +G GGFG+VYK R    K  +A+K          E ++   E K + MA  R +L + G C       LV  YM  GS+     E+  +  PL W  R +I   +A G+++LH    P ++H D+K ANILLD  +   + DFGLAK      +H  +   + GT+ ++ PE +   +     K DV+ + I++  ++T ++ F     A+++N++  ++  VKG+  R E    C  RP
Sbjct:   22 FTGWEKVGSGGFGQVYKVRHVHWKTWLAIKCSPSLHVDDRERMELLEEAKKMEMAKFRYILPVYGICREPVG--LVMEYMETGSL-----EKLLASEPLPWDLRFRIIHETAVGMNFLHCMAPP-LLHLDLKPANILLDAHYHVKISDFGLAKCNGLSHSHDLSMDGLFGTIAYLPPERIREKSRLFDTKHDVYSFAIVIWGVLTQKKPF-----ADEKNILHIMVKVVKGH--RPELPPVCRARP 252          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y9871_DICDI (Probable serine/threonine-protein kinase DDB_G0271682 OS=Dictyostelium discoideum GN=DDB_G0271682 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 58/197 (29.44%), Postives = 97/197 (49.24%), Query Frame = 3
Query:  204 LGRGGFGKV----YKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +G G  G+V    +KG     K +    L++++      +F+ EV I+    H N++   G C       ++  Y+  GS+   L     S   L    + K+ +  A+G++YLH +  P IIHRD+K+ N+L+D  F   V DFGL++ +            GT+  IAPE  +    + K DV+ +GI+L E++T
Sbjct:  366 IGSGACGEVCQYEWKGTPVAVKTIFKSLLRKDKKE----EFEKEVSILKCLRHPNVVLFMGTCLLNGNLAIITEYLNRGSLRDVLTTMNKS--ELSLSVKVKMLIDVAQGMNYLHTY-SPPIIHRDLKSLNLLVDNNFNVKVSDFGLSRFISGGIGSSAKTFCGTLSWIAPEVFNGSGYTTKVDVYSFGIVLWEILT 555          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: TESK2_RAT (Dual specificity testis-specific protein kinase 2 OS=Rattus norvegicus GN=Tesk2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 82/249 (32.93%), Postives = 122/249 (49.00%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVA------TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDEN 827
            D + +Q+G++   S R +  A       D F+ + I G G F +V+K R  A G+++A   LK    S        E+++++   H N+L   G C    +   +  Y+ +G++  +L +    LP   W  R K+A   A GLSYLH      I HRD+ + N L+  +   + AVV DFGLA K+ D        AV G+   +APE L     +EK DVF YGI+L E+I   +A D   L   EN
Sbjct:   29 DGNTVQVGRVSSSSYRAIISAFSRLTSLDDFTREKI-GSGFFSEVFKVRHRASGQVMA---LKMNTLSSNRANLLKEMQLMNRLSHPNILRFMGVCVHQGQLHALTEYINSGNL-EQLLDSNLYLP---WTVRVKLAYDIAVGLSYLHFK---GIFHRDLTSKNCLIKRDENGYSAVVADFGLAEKIPDASIGSEKLAVVGSPFWMAPEVLRDEPYNEKADVFSYGIILCEIIARIQA-DPDYLPRTEN 265          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2_SPOLA1.401e-1732.62Tyrosine-protein kinase SRK2 (Fragment) OS=Spongil... [more]
RIPK2_HUMAN1.401e-1731.58Receptor-interacting serine/threonine-protein kina... [more]
EPHA1_MOUSE1.401e-1731.16Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 ... [more]
EPHA2_MACFA2.389e-1729.86Ephrin type-A receptor 2 OS=Macaca fascicularis GN... [more]
HT1_ARATH3.120e-1731.77Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
Y1143_ARATH5.322e-1730.13Probable LRR receptor-like serine/threonine-protei... [more]
TESK2_MOUSE5.322e-1732.93Dual specificity testis-specific protein kinase 2 ... [more]
RIPK4_HUMAN5.322e-1730.49Receptor-interacting serine/threonine-protein kina... [more]
Y9871_DICDI6.951e-1729.44Probable serine/threonine-protein kinase DDB_G0271... [more]
TESK2_RAT6.951e-1732.93Dual specificity testis-specific protein kinase 2 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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