DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: GPRK1_DROME (G protein-coupled receptor kinase 1 OS=Drosophila melanogaster GN=Gprk1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 77/236 (32.63%), Postives = 110/236 (46.61%), Query Frame = 3
Query:  111 EDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTS--GGELQFQTE---VKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEK-TDVFGYGIMLLELITGQRAF 797
            E D   +  Q K   L  +Q+  + FS   I+GRGGFG+VY  R AD GK+ A+K L ++R     GE+    E   ++ +S  +    +    +     +KL     + NG     L    S          K  A     GL ++H+ C   I++RD+K ANILLDE     + D GLA     K  H +    GT G++APE LS G S +   D F +G ML +L+ G   F
Sbjct:  167 ESDKFTRFCQWKNLELN-IQLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGEMLALNERNMLQAVSTGIDCPFIVCMTYAFHTPDKLCFILDLMNGG---DLHYHLSQHGIFSEDEMKFYAAEVILGLEHMHKRC---IVYRDLKPANILLDENGHIRISDLGLACDFSKKKPHASV---GTHGYMAPEVLSKGTSYDSCADWFSFGCMLYKLLKGHSPF 392          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB1_RAT (Ephrin type-B receptor 1 OS=Rattus norvegicus GN=Ephb1 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   GK    VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  622 EEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPY 825          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB1_MOUSE (Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   GK    VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  622 EEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPY 825          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ABL1_CAEEL (Tyrosine-protein kinase abl-1 OS=Caenorhabditis elegans GN=abl-1 PE=1 SV=4)

HSP 1 Score: 88.9669 bits (219), Expect = 6.951e-17
Identity = 77/229 (33.62%), Postives = 111/229 (48.47%), Query Frame = 3
Query:  198 NILGRGGFGKVYKGRLADGKL-VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAFDLAMLAND----ENVMLLDRVKGYP 860
            N LG G +G VY+G        +AVK LKE+     E  F  E  I+    H+NL+ L G CT      ++  +M NG++   LR    S LPP+      ++A   A G+SYL        IHRD+ A N L+ E     + DFGLA+ M  +DT+   A     +   APE L+    S K+DV+ +G++L E+ T G   +    L+N     EN   +D  +G P
Sbjct:  315 NKLGGGQYGDVYEGYWKRHDCTIAVKALKEDAMPLHE--FLAEAAIMKDLHHKNLVRLLGVCTHEAPFYIITEFMCNGNLLEYLRRTDKSLLPPI---ILVQMASQIASGMSYLEAR---HFIHRDLAARNCLVSEHNIVKIADFGLARFMK-EDTYTAHAGAKFPIKWTAPEGLAFNTFSSKSDVWAFGVLLWEIATYGMAPYPGVELSNVYGLLENGFRMDGPQGCP 534          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FES_FELCA (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Felis catus GN=FES PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17
Identity = 64/196 (32.65%), Postives = 98/196 (50.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHI-----APEYLSTGRSSEKTDVFGYGIMLLE 773
            +GRG FG+V+ GRL AD  LVAVK  +E      + +F  E KI+    H N++ L G CT      +V   +  G   + LR   +    L   T  ++   +A G+ YL   C    IHRD+ A N L+ E+    + DFG+++    ++     A  G +  +     APE L+ GR S ++DV+ +GI+L E
Sbjct:  565 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDIKAKFLQEAKILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRMKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGIYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 750          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB2_MOUSE (Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17
Identity = 65/210 (30.95%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  G L   GK    VA+K LK   T      F +E  I+    H N++ L G  T  T  +++  +M NGS+ S LR+       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ +  D  D   T+A+ G   +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  632 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 835          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB2_HUMAN (Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 PE=1 SV=5)

HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17
Identity = 65/210 (30.95%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  G L   GK    VA+K LK   T      F +E  I+    H N++ L G  T  T  +++  +M NGS+ S LR+       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ +  D  D   T+A+ G   +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  624 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 827          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB1_HUMAN (Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   GK    VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  622 EEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPY 825          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB1_CHICK (Ephrin type-B receptor 1 (Fragment) OS=Gallus gallus GN=EPHB1 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17
Identity = 65/210 (30.95%), Postives = 108/210 (51.43%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   GK    VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  622 EEVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLAE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPY 825          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ROCO7_DICDI (Probable serine/threonine-protein kinase roco7 OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.186e-16
Identity = 66/207 (31.88%), Postives = 105/207 (50.72%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEE----RTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD----EEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            LG G +  VY+G + +G  VA+K L  +     T+    +F+ E  I     H N + L G   +++   LV   +  G +A  +R    +     W T  K+A+  A+G+++LH  C P I+HRD+K+ANILL     +   A VGDFGL+     K+       +     +APE +  G+ +EK D++ Y I+L E+IT    F+
Sbjct: 1781 LGSGSYANVYRG-IWNGSEVAIKVLNFDDGHANTTEKYREFRNEAHITGELRHANTVSLMG--VSLSPFCLVTELLQYGDLAKFIRNTAETF---SWGTVLKLAIDVAKGMNFLHS-CKPMIVHRDLKSANILLGGSSMDNLVAKVGDFGLSIKPIGKEVKGRKVWNWR--WLAPECMGDGQYTEKIDIYSYAIVLWEIITRDLPFE 1978          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GPRK1_DROME6.951e-1732.63G protein-coupled receptor kinase 1 OS=Drosophila ... [more]
EPHB1_RAT6.951e-1730.95Ephrin type-B receptor 1 OS=Rattus norvegicus GN=E... [more]
EPHB1_MOUSE6.951e-1730.95Ephrin type-B receptor 1 OS=Mus musculus GN=Ephb1 ... [more]
ABL1_CAEEL6.951e-1733.62Tyrosine-protein kinase abl-1 OS=Caenorhabditis el... [more]
FES_FELCA9.079e-1732.65Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
EPHB2_MOUSE9.079e-1730.95Ephrin type-B receptor 2 OS=Mus musculus GN=Ephb2 ... [more]
EPHB2_HUMAN9.079e-1730.95Ephrin type-B receptor 2 OS=Homo sapiens GN=EPHB2 ... [more]
EPHB1_HUMAN9.079e-1730.95Ephrin type-B receptor 1 OS=Homo sapiens GN=EPHB1 ... [more]
EPHB1_CHICK9.079e-1730.95Ephrin type-B receptor 1 (Fragment) OS=Gallus gall... [more]
ROCO7_DICDI1.186e-1631.88Probable serine/threonine-protein kinase roco7 OS=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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