DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MKH1_SCHPO (MAP kinase kinase kinase mkh1 OS=Schizosaccharomyces pombe GN=mkh1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.641e-16
Identity = 64/221 (28.96%), Postives = 110/221 (49.77%), Query Frame = 3
Query:  168 QVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ---------FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYLSTGRS--SEKTDVFGYGIMLLELITGQR 791
            Q AT  +    ++G G +GKV+    +  G+L+AVK+++  +T  G               E+ +I+   H N++   GF  T T+  +   Y++ GS+   LR    +  P +    + ++     GLSYLH      IIHRD+KA N+L+D +    + DFG++K  D   D     ++ G++  +APE +       S K DV+  G ++LE++ G+R
Sbjct:  819 QNATFKWMKGELIGNGTYGKVFLAMNINTGELIAVKQVEIPQTINGRHDQLRKDIVDSINAEISMIADLDHLNIVQYLGFEKTETDISIFLEYVSGGSIGRCLR----NYGPFEEQLVRFVSRQVLYGLSYLHSK---GIIHRDLKADNLLIDFDGVCKISDFGISKHSDNVYDNDANLSMQGSIFWMAPEVIHNDHQGYSAKVDVWSLGCVVLEMLAGRR 1032          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB2_CHICK (Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 2.641e-16
Identity = 64/210 (30.48%), Postives = 105/210 (50.00%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  G L   GK    VA+K LK   T      F +E  I+    H N++ L G  T  +  +++  +M NGS+ S LR+       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ +  D  D   T+A+ G   +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  642 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSSPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 845          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: YSK4_HUMAN (SPS1/STE20-related protein kinase YSK4 OS=Homo sapiens GN=YSK4 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16
Identity = 59/206 (28.64%), Postives = 108/206 (52.43%), Query Frame = 3
Query:  201 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTS--GGELQF---QTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY---KDTH--ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ILG+G +G VY G  + G+L+AVK++  + ++    E ++   Q EV ++    H N++   G C       +   ++  GS++S +  R   LP + +    K  L   +G++YLHE+C   ++HRD+K  N++L       + DFG A+ + +     TH  +  ++HGT   +APE ++      K+D++  G  + E+ TG+
Sbjct: 1066 ILGKGAYGTVYCGLTSQGQLIAVKQVALDTSNKLAAEKEYRKLQEEVDLLKALKHVNIVAYLGTCLQENTVSIFMEFVPGGSISS-IINRFGPLPEMVFCKYTKQIL---QGVAYLHENC---VVHRDIKGNNVMLMPTGIIKLIDFGCARRLAWAGLNGTHSDMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGK 1264          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16
Identity = 62/219 (28.31%), Postives = 108/219 (49.32%), Query Frame = 3
Query:  141 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQR 791
            L +FS   L+ AT+ FS +NI+       V+KGRL +G  VA+KR      S  +L F  E + +    H+ L+ L G+C    ++ LV  +MAN ++A RL +R+     +DW  R ++A   A  L Y    C+      + ++ A  +L DE+ +A +  FGL K                   I  + ++TG  + +  ++ +G +L+ L++G++
Sbjct:   35 LTKFSFSALKTATNHFSPENIVSDQTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKL-FLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRK--YQTMDWSIRLRVAYFVAEALDY----CNTAGFASYNNLSAYKVLFDEDGDACLSCFGLMK------------------EINNDQITTGSVNPENVIYRFGTVLVNLLSGKQ 228          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PTK6_HUMAN (Protein-tyrosine kinase 6 OS=Homo sapiens GN=PTK6 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16
Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG G FG+V++G   D   VA+K +  +     ++  Q+E++ +    H+++L L    +      ++   MA GS+   LR+    + P+       IA   A G+ YL        IHRD+ A NIL+ E     VGDFGLA+L+  +D +++   +      APE LS G  S K+DV+ +GI+L E+ +
Sbjct:  197 LGSGYFGEVFEGLWKDRVQVAIKVISRDNLLHQQM-LQSEIQAMKKLRHKHILALYAVVSVGDPVYIITELMAKGSLLELLRDSDEKVLPVS--ELLDIAWQVAEGMCYLESQ---NYIHRDLAARNILVGENTLCKVGDFGLARLIK-EDVYLSHDHNIPYKWTAPEALSRGHYSTKSDVWSFGILLHEMFS 382          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16
Identity = 60/212 (28.30%), Postives = 105/212 (49.53%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +Q+  D        G G FG VY+ + ++  K VAVK+L         L+ + E +I+S+  HRN++   G         +V  Y + GS+   +   +S    +D       A   A+G+ YLH     K+IHRD+K+ N+++  +    + DFG ++  ++  TH++    GT   +APE + +   SE  D + YG++L E++T +  F
Sbjct:    9 VQIKFDDLQFFENCGGGSFGSVYRAKWISQDKEVAVKKL---------LKIEKEAEILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSE--EMDMEHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNH-TTHMSLV--GTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPF 206          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16
Identity = 61/216 (28.24%), Postives = 106/216 (49.07%), Query Frame = 3
Query:  165 LQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLD----WPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            +Q+  D        G G FG VY+ + ++  K VAVK+L         L+ + E +I+S+  HRN++   G         +V  Y + GS+   +   +S    +D    W T        A+G+ YLH     K+IHRD+K+ N+++  +    + DFG ++  ++  TH++    GT   +APE + +   SE  D + YG++L E++T +  F
Sbjct:    9 VQIKFDDLQFFENCGGGSFGSVYRAKWISQDKEVAVKKL---------LKIEKEAEILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMDHIMTWAT------DVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNH-TTHMSLV--GTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVPF 206          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: VAB1_CAEEL (Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab-1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.506e-16
Identity = 71/255 (27.84%), Postives = 119/255 (46.67%), Query Frame = 3
Query:   87 EFFFDVPAEDDSELQL------GQLKRFSLRELQVATDGFSNKNI-LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH-----RDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHI-----APEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            EF FD+   D    Q+      G +    L +   A   +S  N  +GRGG G  Y+    +   VA+K LK   ++  + +F TE  I+    H N++ L G  T+    ++V  YMANGS+   LR        + W    ++  G A G+ YL    D   +H     RD+ A N+LLD E    + DFGL++ +  + + +        G I     APE ++  + +  +DV+ +G+++ E+ + G+R +
Sbjct:  682 EFTFDISPNDVFITQVIGGGEFGDVCLGGLSKNSPAAAKWSVSNTTMGRGGGGGGYESEPYE--TVAIKTLKSGSSAKAKAEFLTEATIMGQFSHPNVIRLIGVVTSAEPVMIVAEYMANGSLDQFLRNTDQRGEKVHWEKITEMLYGIASGMKYL---TDMGYVHRVSFLRDLAARNVLLDMELRCKIADFGLSRGVRSEGSSVEPEYTTNGGKIPVRWTAPEAITHRKFTPSSDVWSFGVVIWEVCSFGERPY 931          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PKN1_THETN (Probable serine/threonine-protein kinase Sps1 OS=Thermoanaerobacter tengcongensis GN=sps1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.506e-16
Identity = 60/202 (29.70%), Postives = 100/202 (49.50%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            +G GG  KVYK +     ++VA+K L+ E  +      +F+ E +  +   H N++G+           +V  Y+   ++   +RE      PL+     +IA    R L + H++   KIIHRD+K  NIL+ +E    V DFG+A+  +      T  V GT  + +PE        E+TD++  GI+L E++TG+  F+
Sbjct:   16 IGEGGMAKVYKAKCHLLNRIVAIKILRPEFAADENFVKKFKRESQAAASLSHPNIVGIYDVGQEGDIYYIVMEYVKGRTLKELIRENGG---PLEVKRAVEIASQVCRALDHAHKN---KIIHRDIKPQNILVTDEDVVKVTDFGIARAANGATITYTGDVIGTAYYFSPEQAKGSIVDERTDIYSLGIVLFEMLTGKVPFE 211          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: NEK8_MOUSE (Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.506e-16
Identity = 66/207 (31.88%), Postives = 111/207 (53.62%), Query Frame = 3
Query:  201 ILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQF-QTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAML 812
            ++GRG FG V+   R AD KLV +K++  E+ +  E Q  Q E +++ +  H N++            ++   Y   G++A  +++R +SL  L+  T     +     L ++H H    I+HRD+K  NILLD+    V +GDFG++K++  K    T  V GT  +I+PE       ++K+D++  G +L EL + +RAF+ A L
Sbjct:    9 VVGRGAFGIVHLCLRKADQKLVILKQIPVEQMTKEERQAAQNECQVLKLLNHPNVIEYYENFLEDKALMIAMEYAPGGTLAEFIQKRCNSL--LEEETILHFFVQILLALHHVHTHL---ILHRDLKTQNILLDKHRMVVKIGDFGISKILSSKSKAYT--VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL 208          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MKH1_SCHPO2.641e-1628.96MAP kinase kinase kinase mkh1 OS=Schizosaccharomyc... [more]
EPHB2_CHICK2.641e-1630.48Ephrin type-B receptor 2 OS=Gallus gallus GN=EPHB2... [more]
YSK4_HUMAN3.450e-1628.64SPS1/STE20-related protein kinase YSK4 OS=Homo sap... [more]
SSP_ARATH3.450e-1628.31Probable inactive receptor-like kinase SSP OS=Arab... [more]
PTK6_HUMAN3.450e-1631.61Protein-tyrosine kinase 6 OS=Homo sapiens GN=PTK6 ... [more]
MLTK_MOUSE3.450e-1628.30Mitogen-activated protein kinase kinase kinase MLT... [more]
MLTK_HUMAN3.450e-1628.24Mitogen-activated protein kinase kinase kinase MLT... [more]
VAB1_CAEEL4.506e-1627.84Ephrin receptor 1 OS=Caenorhabditis elegans GN=vab... [more]
PKN1_THETN4.506e-1629.70Probable serine/threonine-protein kinase Sps1 OS=T... [more]
NEK8_MOUSE4.506e-1631.88Serine/threonine-protein kinase Nek8 OS=Mus muscul... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
back to top