DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PKN1_MOUSE (Serine/threonine-protein kinase N1 OS=Mus musculus GN=Pkn1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 70/226 (30.97%), Postives = 106/226 (46.90%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVK----------IISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            LR+  +  + F    +LGRG FGKV      + G+L A+K LK+     G++  + EV+           ++ A H  L+ L G   T      V  Y A G +   +     S P   + +   +      GL +LHEH   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G++L E++ G+  F
Sbjct:  609 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFRSSGELFAIKALKK-----GDIVARDEVESLMCEKRILAAVTRAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAVFYSACVVL-----GLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPF 819          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PATS1_DICDI (Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum GN=pats1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 74/228 (32.46%), Postives = 117/228 (51.32%), Query Frame = 3
Query:  168 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLK--EERTSGGEL----------QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLS-TGRSSEKTDVFGYGIMLLELITGQRAF 797
            ++  D    + ++G GG   VY+ R   G+ VAVK+LK  E   S  E+          +F+ E  ++S   H N++ L G C  +    +V  Y+ +G++ S L + +       W  R K+AL  + G+++LH    P IIHRD+K+ NILL    E     A V DFGL+ L   + T     V   +  +APE L+ T  +S +TDV+ +G++L EL+T +  F
Sbjct: 2241 KIPFDQLMIEELIGEGGAALVYRARW-QGQTVAVKKLKTIENLDSPIEINDISLSKAFNEFRRECWVMSELEHPNIVQLKGLC--LDPLCIVTEYLPHGNLYSFLHKPEMEF---SWLFRLKVALDISSGMAFLHSSTPP-IIHRDLKSPNILLASINENAQTIAKVVDFGLSGL---QHTITNRGVENPLW-LAPEILNKTKEASTQTDVYAFGVILWELVTRKDYF 2457          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FGFR1_DUGJA (Fibroblast growth factor receptor 1 OS=Dugesia japonica GN=FGFR1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 74/259 (28.57%), Postives = 119/259 (45.95%), Query Frame = 3
Query:   69 RRTRPHEFF--FDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKI------------ALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            R++   EFF  ++ P +   E    +LK              +NK  LG G FG VY+G   D         VAVK ++++ +      F  E++I+  +  H N++ L G CT      ++      G++   +R +        +   KKI            +L  ARG++YL       ++HRD+ A NIL+ E FE  + DFGL +++DY     T  +   V  +APE L   + + K+DV+ YGI+L E+ T
Sbjct:  524 RKSSSFEFFSLYEFPCDAKWEFPREKLK-------------ITNKK-LGEGAFGMVYEGIANDIGNRSNPIKVAVKMMRDDFSDSNVHDFVKEMEIMKHIGRHPNVIQLLGLCTQKGPLRVIVELAPYGNLRDFVRAKNKK-----YSKSKKIIGNFTSSILCTYSLQIARGMTYLASR---SVVHRDLSARNILVGEHFEMKIADFGLTRIVDYYYRKKTDGIL-PVKWMAPEALLEKKYTTKSDVWSYGILLWEIFT 759          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 65/210 (30.95%), Postives = 107/210 (50.95%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLAD-GK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHIT-TAVHG---TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA+K LK   T     +F +E  I+    H N++ L G  T     ++V  +M NGS+ S LR+++     L      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++ ++   ++ T T   G    +   APE +   + +  +DV+ YGI++ E+++ G+R +
Sbjct:  640 EEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLKSGYTDEQRREFLSEASIMGQFEHPNVIHLEGVVTKSRPVMIVTEFMENGSLDSFLRQKEGQFSVLQLVGMLR---GIAAGMRYL---SDMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDASNPTYTGALGCKIPIRWTAPEAVQYRKFTSSSDVWSYGIVMWEVMSYGERPY 843          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: BRAF1_MOUSE (B-Raf proto-oncogene serine/threonine-protein kinase OS=Mus musculus GN=Braf PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  500 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 690          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: BRAF1_HUMAN (B-Raf proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=BRAF PE=1 SV=4)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  463 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 653          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: BRAF1_COTJA (B-Raf proto-oncogene serine/threonine-protein kinase OS=Coturnix coturnix japonica GN=BRAF PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 693          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: BRAF1_CHICK (B-Raf proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=BRAF PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.311e-15
Identity = 65/200 (32.50%), Postives = 104/200 (52.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK L     +  +LQ F+ EV ++    H N+L   G+ +T  +  +V ++    S+   L   ++    +       IA  +A+G+ YLH      IIHRD+K+ NI L E+    +GDFGLA +   +  +H    + G++  +APE +        S ++DV+ +GI+L EL+TGQ
Sbjct:  503 IGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-STKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLID---IARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 693          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 58/203 (28.57%), Postives = 101/203 (49.75%), Query Frame = 3
Query:  198 NILGRGGFGKVYKG-RLADGKLVAVKRLK----EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSA-RGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITG 785
            +I+G+GGFG VYKG     G   A+K++K    ++  S  ++    E+ ++ +  H N++       + +   +V  ++ NGS+  ++ +R   LP     +   + +     GL YLH      +IHRD+KAAN+L+  +    + DFG+A K+ D    +      GT   +APE +     S   DV+  G  ++EL+TG
Sbjct:   26 DIIGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQISLMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVMEFIENGSL-EKIIKRHGLLPE----SLVTVYIAQVLNGLEYLHRQ---GVIHRDIKAANLLISTDGSIKLADFGVATKVSDLSSDNPDDTFAGTPYWMAPEVIQMQGISTACDVWSLGCTIIELLTG 220          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: STK6_PIG (Serine/threonine-protein kinase 6 OS=Sus scrofa GN=AURKA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 63/235 (26.81%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +  +    + K    ++ Q A + F     LG+G FG VY  R    K +   ++    +   +G E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G+  F+
Sbjct:  106 PGNNPEKEAASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGAVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 330          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PKN1_MOUSE1.311e-1530.97Serine/threonine-protein kinase N1 OS=Mus musculus... [more]
PATS1_DICDI1.311e-1532.46Probable serine/threonine-protein kinase pats1 OS=... [more]
FGFR1_DUGJA1.311e-1528.57Fibroblast growth factor receptor 1 OS=Dugesia jap... [more]
EPHB5_CHICK1.311e-1530.95Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
BRAF1_MOUSE1.311e-1532.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_HUMAN1.311e-1532.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_COTJA1.311e-1532.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
BRAF1_CHICK1.311e-1532.50B-Raf proto-oncogene serine/threonine-protein kina... [more]
Y8901_DICDI1.712e-1528.57Probable serine/threonine-protein kinase DDB_G0278... [more]
STK6_PIG1.712e-1526.81Serine/threonine-protein kinase 6 OS=Sus scrofa GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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