DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MUSK_CHICK (Muscle, skeletal receptor tyrosine protein kinase OS=Gallus gallus GN=MUSK PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 71/264 (26.89%), Postives = 117/264 (44.32%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSS----------------LPPLDWPTRKKIALGS--ARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G +   LR+R                   L PL      ++ +    A G++YL E    K +HRD+   N L+ E     + DFGL++ M   DY   +   A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  618 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEYLRDRSPRNLCSLVQGGLEARACLLNPLALCCTSQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNMYSADYYKANENDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 875          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LIMK2_RAT (LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 3
Query:  201 ILGRGGFGKVYK-GRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-------------------MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELI 779
            +LG+G FG+  K    A GK++ +K L   +E T   +  F TEVK++    H N+L   G      +  L+  Y+  G++   LR    ++ P  W  + + A G A G++YLH  C   IIHRD+ + N L+  +   VV DFGL++L                   +   D      V G    +APE L+     E  DVF +GI+L E+I
Sbjct:  336 VLGKGFFGQAIKVTHKATGKVMVMKELIRCDEET---QKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLR----NVDPFPWQQKVRFAKGIASGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKRPPVEKAATKKRTLRKSDRKKRYTVVGNPYWMAPEMLNGKSYDETVDVFSFGIVLCEII 540          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LIMK2_MOUSE (LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 3
Query:  201 ILGRGGFGKVYK-GRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-------------------MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELI 779
            +LG+G FG+  K    A GK++ +K L   +E T   +  F TEVK++    H N+L   G      +  L+  Y+  G++   LR    S+ P  W  + + A G + G++YLH  C   IIHRD+ + N L+  +   VV DFGL++L                   +   D      V G    +APE L+     E  DVF +GI+L E+I
Sbjct:  336 VLGKGFFGQAIKVTHKATGKVMVMKELIRCDEET---QKTFLTEVKVMRSLDHPNVLKFIGVLYKDKKLNLLTEYIEGGTLKDFLR----SVDPFPWQQKVRFAKGISSGMAYLHSMC---IIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKRPPVEKATTKKRTLRKSDRKKRYTVVGNPYWMAPEMLNGKSYDETVDVFSFGIVLCEII 540          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB3_DANRE (Ephrin type-B receptor 3 (Fragment) OS=Danio rerio GN=ephb3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 64/212 (30.19%), Postives = 108/212 (50.94%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +GRL         VA+K LK   T      F +E  I+    H N++ L G  T     L+V  +M NG++ S  RL + + ++  L    R     G A G+ YL    D   +HRD+ A N+L++      V DFGL++ +D    D   T+++ G   +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  190 EEVIGAGEFGEVCRGRLKQAGRKETTVAIKTLKAGYTEHQRRDFLSEASIMGQFDHPNVIHLEGVLTRSCPVLIVTEFMENGALDSFLRLNDGRFTVTQLVGMLR-----GIAAGMKYL---SDMNYVHRDLAARNVLVNSNLVCKVSDFGLSRFLDDNSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSFGERPY 393          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 68/225 (30.22%), Postives = 112/225 (49.78%), Query Frame = 3
Query:  114 DDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKG-RLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            D   + L  ++R S + +Q     +  K ++GRG +G VYK       ++VA+K +  E     EL     E+ ++    H N++   GF     E  ++  Y ANGS+  RL  R S+   L     K     +  GL YLH      +IHRD+KAANILL  +    + DFG++ +++   + +T A  GT+  +APE L    +S  +D++  G  ++E++T
Sbjct:    6 DTDRVNLTPIQRASEKSVQ-----YHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYENDE--ELNDIMAEISLLKNLNHNNIVKYHGFIRKSYELYILLEYCANGSLR-RLISRSST--GLSENESKTYVTQTLLGLKYLHGE---GVIHRDIKAANILLSADNTVKLADFGVSTIVN--SSALTLA--GTLNWMAPEILGNRGASTLSDIWSLGATVVEMLT 213          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: AURKC_MOUSE (Serine/threonine-protein kinase 13 OS=Mus musculus GN=Aurkc PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.712e-15
Identity = 65/222 (29.28%), Postives = 105/222 (47.30%), Query Frame = 3
Query:  144 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGK-LVAVKRL--KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            K F++ + ++          LGRG FG+VY  RL +   +VA+K L   E    G E Q + EV+I +   HRN+L L  +    T   L+  Y   G +   L+  Q     LD      I    +  L+Y HE    K+IHRD+K  N+LL    E  + DFG +    +  +     + GT+ ++ PE ++    +E  D++  G++  EL+ G+  F+
Sbjct:    9 KHFTINDFEIGRP-------LGRGKFGRVYLARLKENHFIVALKVLFKSEIEKEGLEHQLRREVEIQAHLQHRNILRLYNYFYDDTRIYLILEYAPGGELYKELQRHQK----LDQQRTATIIQELSDALTYCHEK---KVIHRDIKPENLLLGLNGEVKISDFGWSV---HTPSLRRKTMCGTLDYLPPEMIAQKPYNEMVDLWCIGVLCYELLVGKPPFE 213          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: STK6_BOVIN (Serine/threonine-protein kinase 6 OS=Bos taurus GN=AURKA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 63/235 (26.81%), Postives = 103/235 (43.83%), Query Frame = 3
Query:  105 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRL---KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFD 800
            P  +  +    + K    ++ Q A + F     LG+G FG VY  R    K +   ++    +   +G E Q + EV+I S   H N+L L G+    T   L+  Y   G+V   L++    L   D           A  LSY H     ++IHRD+K  N+LL    E  + DFG +    +  +   T + GT+ ++ PE +      EK D++  G++  E + G+  F+
Sbjct:  106 PGNNPEKEVASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGAVYRELQK----LSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 330          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SPK1_DUGTI (Tyrosine-protein kinase SPK-1 OS=Dugesia tigrina PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 58/211 (27.49%), Postives = 100/211 (47.39%), Query Frame = 3
Query:  159 RELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK-DTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            +++++  +     N +GRG FG V++ +      VA K L+  +      +F  E KI+    HR ++ L G CT   +   L++  YM NGS+   L+        L+        +  + G++YL      K++HRD++A NIL+  +    V DFGL +L D          +       APE   +   + K+DV+ YGI++ E++T
Sbjct:  211 QDIEINRENIEILNEIGRGFFGSVHRAKWGRSYEVAAKMLQSSKAE--REKFVLEAKIMHKLRHRKIVELLGVCTEPQDMPMLIIVEYMKNGSLKEYLKTPDGKKTNLNQMVHMMAEI--SEGMAYLESE---KVVHRDLRADNILVANDLTRKVADFGLTELTDGSLGDQEKKTLRFPYKWTAPEAAKSKVFTSKSDVWSYGIVMFEILT 414          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PLK4_DROSI (Serine/threonine-protein kinase PLK4 OS=Drosophila simulans GN=SAK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 67/224 (29.91%), Postives = 103/224 (45.98%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLL 839
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +    R       P        I      GL YLH H    I+HRD+  +N+LL  E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+   + +  N +++
Sbjct:   12 EDYEVQHLLGKGGFATVYKARCLHTHQDVAIKMIDKKLIQGTGLTSRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELH---RYMNHIARPFTETEAASILKQVVAGLLYLHSH---NIMHRDISLSNLLLSREMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFETDAVQSTLNKVVM 227          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PLK4_DROGR (Serine/threonine-protein kinase PLK4 OS=Drosophila grimshawi GN=SAK PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 66/224 (29.46%), Postives = 105/224 (46.88%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLL 839
            D +  +++LG+GGF  VYK + L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +   + ++     P        I      GL YLH H    I+HRD+  +N+LL  +    + DFGLA  +   D  H+T    GT  +I+PE +S        D++  G ML  L+ G+  FD   + +  N ++L
Sbjct:   12 DEYEVQHLLGKGGFACVYKAKCLRTQQNVAIKMIDKKLIQGSGLSSRVRQEVEIHSRLKHPSVLQLHTFFQDGNYVYLVLELADNGELHRYMNQQMKR--PFTEQEASSILRQVVDGLLYLHSH---NIMHRDISLSNLLLSRDMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSHMSHGLPADLWSVGCMLYTLLVGRPPFDTDAVQSTLNKVVL 228          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MUSK_CHICK1.712e-1526.89Muscle, skeletal receptor tyrosine protein kinase ... [more]
LIMK2_RAT1.712e-1531.16LIM domain kinase 2 OS=Rattus norvegicus GN=Limk2 ... [more]
LIMK2_MOUSE1.712e-1531.16LIM domain kinase 2 OS=Mus musculus GN=Limk2 PE=1 ... [more]
EPHB3_DANRE1.712e-1530.19Ephrin type-B receptor 3 (Fragment) OS=Danio rerio... [more]
CDC15_YEAST1.712e-1530.22Cell division control protein 15 OS=Saccharomyces ... [more]
AURKC_MOUSE1.712e-1529.28Serine/threonine-protein kinase 13 OS=Mus musculus... [more]
STK6_BOVIN2.236e-1526.81Serine/threonine-protein kinase 6 OS=Bos taurus GN... [more]
SPK1_DUGTI2.236e-1527.49Tyrosine-protein kinase SPK-1 OS=Dugesia tigrina P... [more]
PLK4_DROSI2.236e-1529.91Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]
PLK4_DROGR2.236e-1529.46Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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