DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PKN1_HUMAN (Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 70/226 (30.97%), Postives = 105/226 (46.46%), Query Frame = 3
Query:  156 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVK----------IISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAF 797
            LR+  +  + F    +LGRG FGKV        G+L A+K LK+     G++  + EV+           ++ A H  L+ L G   T      V  Y A G +   +     S P   + +   +      GL +LHEH   KI++RD+K  N+LLD E    + DFGL K  M Y D   T+   GT   +APE L+    +   D +G G++L E++ G+  F
Sbjct:  605 LRKSPLTLEDFKFLAVLGRGHFGKVLLSEFRPSGELFAIKALKK-----GDIVARDEVESLMCEKRILAAVTSAGHPFLVNLFGCFQTPEHVCFVMEYSAGGDLMLHIHSDVFSEPRAIFYSACVVL-----GLQFLHEH---KIVYRDLKLDNLLLDTEGYVKIADFGLCKEGMGYGDR--TSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPF 815          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MUSK_RAT (Muscle, skeletal receptor tyrosine protein kinase OS=Rattus norvegicus GN=Musk PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 71/266 (26.69%), Postives = 116/266 (43.61%), Query Frame = 3
Query:   75 TRPHEFFFDVPAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANG--------------------SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM---DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            T P E   D    +    ++  L    L  L+   +       +G G FG+V++ R A G L       VAVK LKEE ++  +  FQ E  +++   + N++ L G C       L++ YMA G                     +++R R      PPL    +  IA   A G++YL E    K +HRD+   N L+ E     + DFGL++ +   DY       A+   +  + PE +   R + ++DV+ YG++L E+ +
Sbjct:  537 TLPSELLLDRLHPNPMYQRMPLLLNPKLLSLEYPRNNIEYVRDIGEGAFGRVFQAR-APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 796          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: MATK_MOUSE (Megakaryocyte-associated tyrosine-protein kinase OS=Mus musculus GN=Matk PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 66/197 (33.50%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRA 794
            +G G FG V +G    G+ VAVK +K + T+     F  E  +++   HRNL+ L G         +V  +++ G++ + LR R  +L  +      + AL  A G+ YL      K++HRD+ A NIL+ E+  A V DFGLAK     +     +    V   APE L  GR S K+DV+ +G++L E+ +  RA
Sbjct:  239 IGEGEFGAVLQGEYL-GQKVAVKNIKCDVTAQA---FLDETAVMTKLQHRNLVRLLGVILH-HGLYIVMEHVSKGNLVNFLRTRGRAL--VSTSQLLQFALHVAEGMEYLESK---KLVHRDLAARNILVSEDLVAKVSDFGLAK----AERKGLDSSRLPVKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRA 421          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 63/215 (29.30%), Postives = 105/215 (48.84%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKL-LVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDR 845
            LG G FG+V+ G   D   VAVK LK+   S     F  E  ++    H+ L+ L  +     E + ++  YM NGS+   L+        ++      +A   A G++++ E      IHRD++AANIL+ +     + DFGLA+L++  +          +   APE ++ G  + K+DV+ +GI+L E++T  R      + N E +  L+R
Sbjct:  251 LGAGQFGEVWMGYYNDHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-IPYPGMTNPEVIQNLER 455          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: FGFR1_DROME (Fibroblast growth factor receptor homolog 1 OS=Drosophila melanogaster GN=htl PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 68/225 (30.22%), Postives = 110/225 (48.89%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL---------RERQSSLPPLDWP----TRK---KIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-ITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAFDLAMLAND 821
            LG G FG+V    + +  +VAVK +KE  T         E++++ +   H N++ L G C+      ++  Y  +G++   L         ++R SS PP   P    T K   K A   ARG+ YL      + IHRD+ A N+L+ +++   + DFGLA+ +   D +   T     +  +APE L       K+DV+ YGI+L E++T GQ+ +   M A +
Sbjct:  422 LGEGAFGRVVMAEV-NNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYLASR---RCIHRDLAARNVLVSDDYVLKIADFGLARDIQSTDYYRKNTNGRLPIKWMAPESLQEKFYDSKSDVWSYGILLWEIMTYGQQPYPTIMSAEE 642          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB4_MOUSE (Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 65/212 (30.66%), Postives = 112/212 (52.83%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVAS--RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +GRL A GK    VA+K LK   T     +F +E  I+    H N++ L G  T     +++  +M NG++ S  RL + Q ++  L    R     G A G+ YL E      +HRD+ A NIL++      V DFGL++ ++    D   T+++ G  ++   APE ++  + +  +D + YGI++ E+++ G+R +
Sbjct:  618 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSVPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR-----GIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKISIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPY 821          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHB3_XENLA (Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 62/210 (29.52%), Postives = 104/210 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD--YKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V +G+L       + VA+K LK   T      F  E  I+    H N++ L G  T     +++  +M NG++ S LR        +       I  G A G+ YL E      +HRD+ A NIL++      V DFGL++ ++    D   T+A+ G   +   APE +S  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  612 EEVIGAGEFGEVCRGKLKQAGRREQFVAIKTLKAGYTEQQRRDFLGEASIMGQFDHPNIIRLEGVVTRSRPVMILTEFMENGALDSFLRMNDGQFTVIQ---LVGILRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLENSRSDPTYTSALGGKIPIRWTAPEAISYRKFTSASDVWSYGIVMWEVMSYGERPY 815          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPB1A_XENLA (Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ephb1-A PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 64/213 (30.05%), Postives = 107/213 (50.23%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLADGKL-------VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+VYKGRL   KL       VA+K LK   +      F +E  I+    H N++ L G  T     +++  +M NG++ S LR+       +      +   G A G+ YL E      +HRD+ A NIL++      V DFGL++ +  D  D   T+++ G   V   A E ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  623 EEVIGAGEFGEVYKGRL---KLPSKREISVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPTYTSSLGGKIPVRWTAQEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 826          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ABL_DROME (Tyrosine-protein kinase Abl OS=Drosophila melanogaster GN=Abl PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 2.236e-15
Identity = 68/209 (32.54%), Postives = 103/209 (49.28%), Query Frame = 3
Query:  162 ELQVATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTA-VHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            E ++       K+ LG G +G+VY+      G  VAVK LKE+  +  +  F  E  I+    H NL+ L G CT      ++  +M++G++   LR   +    LD      +A   A G+SYL        IHRD+ A N L+ +     V DFGLA+LM   DT+   A     +   APE L+  + S K+DV+ +G++L E+ T
Sbjct:  363 EWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNTVAVKTLKEDTMALKD--FLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS--AGRETLDAVALLYMATQIASGMSYLESR---NYIHRDLAARNCLVGDNKLVKVADFGLARLM-RDDTYTAHAGAKFPIKWTAPEGLAYNKFSTKSDVWAFGVLLWEIAT 563          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: PLK4_DROYA (Serine/threonine-protein kinase PLK4 OS=Drosophila yakuba GN=SAK PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.921e-15
Identity = 67/224 (29.91%), Postives = 104/224 (46.43%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGEL--QFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLL 839
            + +  +++LG+GGF  VYK R L   + VA+K + ++   G  L  + + EV+I S   H ++L L  F        LV     NG +    R       P        I      GL YLH H    I+HRD+  +N+LL +E    + DFGLA  +   D  H+T    GT  +I+PE +S        DV+  G ML  L+ G+  F+   + +  N +++
Sbjct:   12 EDYEVQHLLGKGGFAIVYKARCLHTHQDVAIKMIDKKLIQGTGLTNRVRQEVEIHSRLKHPSVLQLYTFFQDANYVYLVLELAHNGELH---RYMNHIARPFTETEAASILKQVVAGLLYLHSH---NIMHRDISLSNLLLSKEMHVKIADFGLATQLKRPDERHMTMC--GTPNYISPEVVSRSSHGLPADVWSVGCMLYTLLVGRPPFETDAVQSTLNKVVM 227          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PKN1_HUMAN2.236e-1530.97Serine/threonine-protein kinase N1 OS=Homo sapiens... [more]
MUSK_RAT2.236e-1526.69Muscle, skeletal receptor tyrosine protein kinase ... [more]
MATK_MOUSE2.236e-1533.50Megakaryocyte-associated tyrosine-protein kinase O... [more]
LCK_AOTNA2.236e-1529.30Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
FGFR1_DROME2.236e-1530.22Fibroblast growth factor receptor homolog 1 OS=Dro... [more]
EPHB4_MOUSE2.236e-1530.66Ephrin type-B receptor 4 OS=Mus musculus GN=Ephb4 ... [more]
EPHB3_XENLA2.236e-1529.52Ephrin type-B receptor 3 OS=Xenopus laevis GN=ephb... [more]
EPB1A_XENLA2.236e-1530.05Ephrin type-B receptor 1-A OS=Xenopus laevis GN=ep... [more]
ABL_DROME2.236e-1532.54Tyrosine-protein kinase Abl OS=Drosophila melanoga... [more]
PLK4_DROYA2.921e-1529.91Serine/threonine-protein kinase PLK4 OS=Drosophila... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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