DY258284

Overview
NameDY258284
Unique NameDY258284
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1315
Libraries
Library NameType
AbsDev1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1067 contig Ccv1_Contig1067:1..1315. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRK4_SPOLA (Tyrosine-protein kinase isoform SRK4 OS=Spongilla lacustris GN=SRK1 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 66/193 (34.20%), Postives = 90/193 (46.63%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG G FG+V++G       VAVK LK    S  E  F  E  I+    H  L+ L   CT      +V   M +GS+   LR    SL     P    +    A G+SYL +      IHRD+ A NIL+ E     V DFGLA+++D +           +   APE     R + K+DV+ +GI+L E+IT
Sbjct:  246 LGAGQFGEVWEGLWNGTTSVAVKTLKPGTMSIEE--FLEEASIMKQLRHPKLIQLYAVCTKEEPIYIVTELMKHGSLLEYLRGDGRSLK---LPDLVDMCSQVASGMSYLEQQ---NYIHRDLAARNILVGEHKICKVADFGLARVIDEEIYEAKLGAKFPIKWTAPEAAMYSRFTIKSDVWSFGIVLYEVIT 430          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: SRC_RSVPA (Tyrosine-protein kinase transforming protein Src OS=Rous sarcoma virus (strain PA101T) GN=V-SRC PE=3 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 72/221 (32.58%), Postives = 107/221 (48.42%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDRV-KGY 857
            LG+G FG+V+ G       VA+K LK    S     F  E +++    H  L+ L      V+E+   +V  YM+ GS+   L+        L  P   ++A   A G++Y+        +HRD++AANIL+ E     V DFGLA+L++  +          V   APE    GR + K+DV+ +GI+L EL T  R     M+    N  +LDRV +GY
Sbjct:  270 LGQGYFGEVWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAM---VSEEPIYIVIEYMSKGSLLDFLKGEMGKY--LRLPQLVEMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARPGARFPVKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV----NGEVLDRVERGY 476          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: ROS_AVISU (Tyrosine-protein kinase transforming protein ros OS=UR2 sarcoma virus GN=V-ROS PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 71/225 (31.56%), Postives = 109/225 (48.44%), Query Frame = 3
Query:  180 DGFSNKNILGRGGFGKVYKGR----LADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRL---RERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEE------FEAVVGDFGLAKLMDYKDTHITTAVHG--TVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            D  +   +LG G FG+VY+G     LADG     VAVK LK   T   + +F  E  ++S   H ++L L G C     + L+   M  G + S L   R+++   P L       I L   +G  YL +    + IHRD+ A N L+ E+          +GDFGLA+ + YK+ +      G   V  +APE L  G  +  +DV+ +G+++ E +T GQ+ +
Sbjct:   96 DKLNLHKLLGSGAFGEVYEGTALDILADGSGESRVAVKTLKRGATDQEKSEFLKEAHLMSKFDHPHILKLLGVCLLNEPQYLILELMEGGDLLSYLRGARKQKFQSPLLTLTDLLDICLDICKGCVYLEK---MRFIHRDLAARNCLVSEKQYGSCSRVVKIGDFGLARDI-YKNDYYRKRGEGLLPVRWMAPESLIDGVFTNHSDVWAFGVLVWETLTLGQQPY 316          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: RAF1_RAT (RAF proto-oncogene serine/threonine-protein kinase OS=Rattus norvegicus GN=Raf1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 66/200 (33.00%), Postives = 100/200 (50.00%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD-YKDTHITTAVHGTVGHIAPEYL---STGRSSEKTDVFGYGIMLLELITGQ 788
            +G G FG VYKG+      VAVK LK    +  +LQ F+ EV ++    H N+L   G+ T      +V ++    S+   L  +++            IA  +A+G+ YLH      IIHRD+K+ NI L E     +GDFGLA +   +  +       G+V  +APE +        S ++DV+ YGI+L EL+TG+
Sbjct:  355 IGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQLQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID---IARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 545          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: M3K3_ARATH (Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana GN=ANP3 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 58/205 (28.29%), Postives = 106/205 (51.71%), Query Frame = 3
Query:  201 ILGRGGFGKVYKG-RLADGKLVAVKRL-------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA-KLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++G G FG+VY G  L  G+L+A+K++        +E+T G   + + EV+++    H N++   G         ++  ++  GS++S L +  S   P+     K++ LG    L YLH +    I+HRD+K ANIL+D +    + DFG + K+++    +   ++ GT   +APE +     S   D++  G  ++E+ TG+
Sbjct:   73 LIGCGAFGRVYMGMNLDSGELLAIKQVLIAPSSASKEKTQGHIRELEEEVQLLKNLSHPNIVRYLGTVRESDSLNILMEFVPGGSISSLLEKFGSFPEPVIIMYTKQLLLG----LEYLHNN---GIMHRDIKGANILVDNKGCIRLADFGASKKVVELATVNGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGK 270          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 61/205 (29.76%), Postives = 102/205 (49.76%), Query Frame = 3
Query:  201 ILGRGGFGKVYKG-RLADGKLVAVKRL-------KEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK-LMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQ 788
            ++GRG FG VY G  L  G+L+AVK++        +E+T     + + EVK++    H N++   G         ++  ++  GS++S L E+  + P     T     L    GL YLH H    I+HRD+K ANIL+D +    + DFG +K + +        ++ GT   +APE +     S   D++  G  ++E++TG+
Sbjct:   73 LIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDETLNILLEFVPGGSISSLL-EKFGAFPESVVRTYTNQLL---LGLEYLHNHA---IMHRDIKGANILVDNQGCIKLADFGASKQVAELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMVTGK 270          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LYN_RAT (Tyrosine-protein kinase Lyn OS=Rattus norvegicus GN=Lyn PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 57/193 (29.53%), Postives = 93/193 (48.19%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT 782
            LG G FG+V+ G   +   VAVK LK    S     F  E  ++    H  L+ L    T      ++  +MA GS+   L+  + S   L  P     +   A G++Y+        IHRD++AAN+L+ E     + DFGLA++++  +          +   APE ++ G  + K+DV+ +GI+L E++T
Sbjct:  253 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSAQA--FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGSKVLL--PKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 438          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: LCK_SAISC (Proto-oncogene tyrosine-protein kinase LCK OS=Saimiri sciureus GN=LCK PE=1 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 63/216 (29.17%), Postives = 105/216 (48.61%), Query Frame = 3
Query:  204 LGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEK--LLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELITGQRAFDLAMLANDENVMLLDR 845
            LG G FG+V+ G   +   VAVK LK+   S     F  E  ++    H+ L+ L      VTE+   ++  YM NGS+   L+        ++      +A     G+++L E      IHRD++AANIL+ +     + DFGLA+L++  +          +   APE ++ G  + K+DV+ +GI++ E++T  R      + N E +  L+R
Sbjct:  251 LGAGQFGEVWMGYYNEHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHKRLVRLYA---VVTEEPIYIITEYMENGSLVDFLKTPSGIKLTIN--KLLDMAAQIVEGMAFLEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILMTEIVTHGR-IPYPGMTNPEVIQNLER 455          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA5_CHICK (Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 62/208 (29.81%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRLA-DGKL---VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA+K LK   T      F  E  I+    H N++ L G  T     ++V  YM NGS+ + L++       +      +   G A G+ YL    D   +HRD+ A NIL++      V DFGL++++  D +  + T      +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  654 ERVIGAGEFGEVCSGRLKLQGKREFPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVMSYGERPY 855          
BLAST of DY258284 vs. ExPASy Swiss-Prot
Match: EPHA4_MOUSE (Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.497e-15
Identity = 60/208 (28.85%), Postives = 103/208 (49.52%), Query Frame = 3
Query:  195 KNILGRGGFGKVYKGRL-ADGK---LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLGLCGFCTTVTEKLLVYRYMANGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDTHITTAVHGTVGHIAPEYLSTGRSSEKTDVFGYGIMLLELIT-GQRAF 797
            + ++G G FG+V  GRL   GK    VA+K LK   T      F +E  I+    H N++ L G  T     +++  YM NGS+ + LR+       +      +   G   G+ YL    D   +HRD+ A NIL++      V DFG+++++  D +  + T      +   APE ++  + +  +DV+ YGI++ E+++ G+R +
Sbjct:  624 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 825          
The following BLAST results are available for this feature:
BLAST of DY258284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK4_SPOLA8.497e-1534.20Tyrosine-protein kinase isoform SRK4 OS=Spongilla ... [more]
SRC_RSVPA8.497e-1532.58Tyrosine-protein kinase transforming protein Src O... [more]
ROS_AVISU8.497e-1531.56Tyrosine-protein kinase transforming protein ros O... [more]
RAF1_RAT8.497e-1533.00RAF proto-oncogene serine/threonine-protein kinase... [more]
M3K3_ARATH8.497e-1528.29Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K2_ARATH8.497e-1529.76Mitogen-activated protein kinase kinase kinase 2 O... [more]
LYN_RAT8.497e-1529.53Tyrosine-protein kinase Lyn OS=Rattus norvegicus G... [more]
LCK_SAISC8.497e-1529.17Proto-oncogene tyrosine-protein kinase LCK OS=Saim... [more]
EPHA5_CHICK8.497e-1529.81Ephrin type-A receptor 5 OS=Gallus gallus GN=EPHA5... [more]
EPHA4_MOUSE8.497e-1528.85Ephrin type-A receptor 4 OS=Mus musculus GN=Epha4 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAI1AA05FM2 AbsDev1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY258284 ID=DY258284; Name=DY258284; organism=Citrus clementina; type=EST; length=1315bp
TTCCTGTGGGAGTTGCTCTTGGCGCTGCTTTACTTTTTGCTGTACCAGTT
ATTGGGTTTGCATATTGGCGGCGAACAAGACCACACGAATTTTTCTTTGA
CGTACCTGCTGAAGATGATTCAGAACTCCAGTTGGGACAGTTGAAAAGGT
TTTCTTTGCGAGAACTACAAGTTGCTACAGATGGTTTTAGCAACAAGAAC
ATCCTGGGAAGAGGTGGATTTGGCAAGGTGTATAAGGGACGCTTGGCTGA
TGGCAAATTGGTGGCAGTCAAAAGACTTAAGGAAGAGAGGACATCTGGAG
GGGAGTTGCAGTTTCAAACAGAAGTGAAGATAATCAGCATGGCTGTGCAT
CGGAATCTTCTGGGATTATGTGGGTTTTGCACGACTGTCACTGAGAAACT
GCTTGTTTATCGATACATGGCCAATGGAAGTGTTGCATCACGCCTAAGAG
AGCGGCAATCATCACTCCCGCCTCTTGACTGGCCAACTAGGAAGAAAATT
GCTTTAGGTTCAGCGAGGGGCCTTTCATATTTGCACGAGCATTGTGACCC
AAAGATCATTCATCGAGATGTCAAAGCTGCAAACATATTGTTGGATGAAG
AGTTTGAGGCTGTCGTTGGTGACTTTGGTTTAGCTAAACTAATGGACTAC
AAGGACACCCACATAACCACTGCTGTGCATGGCACCGTTGGGCATATAGC
CCCAGAGTATCTCTCCACAGGGAGGTCATCAGAGAAAACGGATGTTTTTG
GTTACGGTATCATGCTGTTAGAGCTAATTACCGGACAAAGGGCATTTGAT
CTTGCTATGCTTGCAAACGATGAAAATGTTATGCTCCTTGATAGAGTTAA
AGGATACCCTANGAGAGAAGAATTTTGATGTACTTGTTGATAAAGACCTG
CCGACTGATTATGAATGAAACTGAAGTGGGAAGAACTCCTCCCAAGTGGC
CCTCCCTTGCCCCCCAACCCCCCCCATCCCACGGGCCCAAAAAAGTCGAA
ATTTGCCAAAATGCTTGAAAGGGCATGGGCTGGGCAAAAAAAAAGGGGGC
AGGGGGGCCAACGGCCGGAGGGTATCCCCCCCCCAAGAAATCTTCATTTG
CCCCACCGGGCAAAAAATTTAAAAAAAAAAAAATTTACCCTCCCCCCCCA
CCCCTTTTTCAAAAATTGCTTTTTTCCCGCGGGCCGCCAAAAAAGAAAAA
GATTTTTTTCCTGTTGGGGCAAACAAAAAGAAAAAACCACCACAACCCCC
CCCTCTTCTCCCCCCTCCCCCCCCCTATTAATTAAGGGAGGGGGGGGTTT
GATTAAACCCCCCCC
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